Array 1 863487-861609 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134484.1 Gemella haemolysans strain NCTC10459 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 863486 36 88.9 29 C..A....T...C....................... GAAAGATACAATTAGATTACTAACGGATA A,A [863472,863481] 863419 36 94.4 29 TG.................................. GAAAGATACAATTAGATTACTAACGGATA 863354 36 94.4 30 TG.................................. TATCATACGTTGGAAATAGAAGATAACATT 863288 36 100.0 30 .................................... GAATGTTGTAACACTTCTGCCAATCTTGGT 863222 36 100.0 30 .................................... TACTCATCTGGAGTACAGCTTTCATCAAGA 863156 36 100.0 30 .................................... TGTACTATTGAGATTATTCATTAAATCATC 863090 36 100.0 30 .................................... TAACTCCTAATCTTTACAACTTCCATAAAT 863024 36 100.0 30 .................................... AGGAGGTTTAACAATGAAATTAAAAATTGC 862958 36 100.0 30 .................................... GTATATACTAACGAACCATCAGCTGTATTT 862892 36 100.0 29 .................................... TATGGTGTTAAGTATGCAAACGGGGAATG 862827 36 97.2 30 ......................T............. AACTATCAGACACAATAGGGCAAGAGGCTC 862761 36 100.0 30 .................................... TTGTTCGGGATGTAATAACGCTCATCAGCG 862695 36 100.0 29 .................................... TTTGCTGTTCTATCAAACGTTTTTTTCTA 862630 36 100.0 30 .................................... GGAAATCTTAGTAAAGAAAACTTTGAAATG 862564 36 100.0 29 .................................... GCAAATTACCACCAACTGTCCAATTAGCC 862499 36 100.0 30 .................................... AACATGGATCAAGAGTTAAATAATGTCGAA 862433 36 100.0 29 .................................... ATTCTTGATGTTTGGGGTGGCGAATATGA 862368 36 100.0 30 .................................... AAAGTTTTCGGTACCTTTATTTGTGGCGGT 862302 36 100.0 30 .................................... CGGTTGGTGGGATTACATGGTAGACGGTCT 862236 36 100.0 29 .................................... ATCGAGGGTCGACAAATTAAAACTGAAAC 862171 36 100.0 30 .................................... GTGCTAGATGGAACGATGTAACAAATGCAC 862105 36 97.2 30 .....................G.............. AGCAAAGATAGAGCGAAAATTCGCCGTTTT 862039 36 100.0 30 .................................... AATCAAGTGTTCGATGGAAGAAATCTTGCA 861973 36 100.0 30 .................................... ATTAATTTAGATGGATGCCAAAATTTATAA 861907 36 100.0 30 .................................... ATTGATAGAGTTGAGAGTCTATGTCAGGAA 861841 36 100.0 29 .................................... AATGAATTTGAACAGCGTGTAGCTCAGTT 861776 36 100.0 30 .................................... CATCAAATTTACAGACAAACTGTAGGAAAT 861710 36 100.0 30 .................................... TCAAAGAGTAACATAATATCCACCTACTTT 861644 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 29 36 99.0 30 GTTTTGTAGAATTCAAAATTTACATATCTCTCAAAC # Left flank : GCCCTACTTCTATGAAAGCCGGTGTTGATGTAGTAAGTAGTTATGATGACTTCGATTATAAAACACTTGTTCTAGGAAGTATGTTCGAACTAGGACCTAACGAAGTTAACTATCACGGTGAAGTTGGAGAATATATTTCTGAAAACACAAACGATATCGACCTAGTAATCAGCGTTGGTGACCTAGCAGAAAACATTACAAAACAAATTAAAAACGACAAAATAAAAACACTACATTTCCCTACTACAGCAGAAGTTAGTGAATATCTAAAAAATAACAAACACAAAAACGAAGTTATCTTATTCAAAGCAAGCCGTTCTATGAAACTAGAGACTATTATTGAAGAGATAACGAAGTAAGAGAATATTTAAAAGCGTTTACGTTTATTGAGATTAACGTAAATGCTTTTTTCTTTGTTCTAGCAATAGTTCTACTTGAAATTATGTAAACAAAAATAAGATTATAGATCAAATAACACTCAATGTTATCTCATCAATAAT # Right flank : CTCAAATTGAGATTTAGAGAAGAAATTTTGAATTTGGGTATAAAAAAATGGACCGACACCGATCCAGGCCCGAAGGCAATTTAGATAAAATCTTTATTTGAACTTGAATGTAAATTTTGAATCTACCTATATTATACAAGTATTTTCATAAAAATGCAATACTATATTTCACAATTATCTTTATCAAAAATATAAACTATTTCTTTATAATTTTTTGCAGATAAATTATTAAATTGTTGATACTCTACATTTATGATATTTATTTTATTCAAACATACTTCTTTATAAATTTCTATTATTTCTTCTTGCGTGAAAACGGTGTGAAGTCCTACTACAAAAATAATTTTAAAACAACATAGTTCTGTTAATACTTTTAAGAATTTTACAAAATTTTCTAAAATATCATCATTTTCAACATGTATTTTAAAATCCCCTAGTTTTAATAACGACGACATATCTATCTCTTCACCTTGTTCAATTTCTAAAGAACTATTAAATAT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGTAGAATTCAAAATTTACATATCTCTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA //