Array 1 559015-562092 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAGXU010000002.1 Klebsiella pneumoniae strain 5012STDY7312664, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 559015 29 100.0 33 ............................. GCCCGCGCGAACCTGGGGCTGGGAGATTCAGCG 559077 29 100.0 33 ............................. TTGGCGGTCGACGGTGGCGAACTGCCTGATCAG 559139 29 100.0 32 ............................. GGGGGGAAATCAAGGTCAAAGTTGAGCTGGAT 559200 29 100.0 32 ............................. CCTCGATCATTCTTGCCAGTTGGGAGTCGGAC 559261 29 100.0 32 ............................. TCGTAGCTAATAAATTCGTTGCTCATTTGAAA 559322 29 100.0 32 ............................. GCATCGCTCGCCTCGTTCGGTGCTAACGCTGG 559383 29 100.0 32 ............................. CGGCTGCGCTGTTGCACATAGCCGCTCAACCT 559444 29 100.0 32 ............................. CGGCCGCGTTCTCCCCTGTGGGAGGGGTGGGG 559505 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 559566 29 100.0 32 ............................. ATACGCAGTCATTAATCGCGGGTGTTACGCAA 559627 29 100.0 32 ............................. CCTGCTGTCATTTCCTTCGGCACTACCGGCGC 559688 29 100.0 32 ............................. CCTAAATTGCCAATTTTCCTTGAGCGCTGGTA 559749 29 100.0 32 ............................. GTAACAGGTCAACTCTTTATCGCTAACGGCTC 559810 29 100.0 32 ............................. CTTTTCATTTTCTCATGACCGCCACCATTTCG 559871 29 100.0 32 ............................. AATACCGGCGGCAGGGATTTACGCCCGAGCAG 559932 29 100.0 32 ............................. ATTTTGCGTACGCTCTCCCACAGCTGATCGTG 559993 29 100.0 32 ............................. TTTCCGGCAGCGTAGCCAACCCGGCCAACCGT 560054 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 560115 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 560176 29 96.6 32 A............................ GGCGCCGGCCTGATCACTATCGGGTAACGGTG 560237 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTTCACCTGGAA 560298 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 560359 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 560420 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 560481 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 560542 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 560603 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 560664 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 560725 29 100.0 32 ............................. GGCCCAGTAATCCCCGCGAAGTCCTGAAGACG 560786 29 100.0 32 ............................. GTTGCGAAGCCTACGTCCAGATCGTAGAGATA 560847 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 560908 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 560969 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 561030 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 561091 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 561152 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 561213 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 561274 29 100.0 32 ............................. GAATATAAAACCGGATTCCATATAGCCCTGTG 561335 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 561396 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 561457 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 561518 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 561579 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 561640 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 561701 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 561762 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 561823 29 100.0 32 ............................. GAATTTATTGGGAGGTGATAGCTCTGGCAGGT 561884 29 100.0 32 ............................. GGTATGCAGGGCACACGCCAAAATAATTTTGC 561945 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 562006 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 562064 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 51 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGTG # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTCTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCTTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGGAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //