Array 1 8610-10953 **** Predicted by CRISPRDetect 2.4 *** >NZ_WODR01000051.1 Klebsiella pneumoniae strain NEF199/4 NEF199-4_S8_L001_NODE_51, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8610 29 100.0 32 ............................. GCCGACATGCTGGGCGCGATCACAACGGTTAA 8671 29 100.0 32 ............................. GGCGCGGTGTGGTATTGGGTGAAACTGGACGA 8732 29 100.0 32 ............................. GCACTTTACCTTCGAGGTCGTTCCCTTCGAGG 8793 29 100.0 32 ............................. ATGTATGGATCGAGCCAGGCGCAACCACGAAC 8854 29 100.0 32 ............................. CCAGGGCTTTCGGACCGTCAGGAGCAAATCAA 8915 29 100.0 32 ............................. TAAACGGCACAAGCGGCACCTGCGGCCAGGTG 8976 29 100.0 32 ............................. CGTGTCGGTCATGGCGATGCTGGGCGGCGATA 9037 29 100.0 32 ............................. CGCCTGGGGGGATCGCGGTGAGTGATTCATTT 9098 29 100.0 32 ............................. CGCCTCAACAAATGCGACTTCATAGCCTGCTG 9159 29 100.0 32 ............................. GCTCGGTGTGGCCTAAATCAATTCGCGGATCC 9220 29 96.6 32 ............................C CTTGCATACGTGTTACCCTCCATAACCTCACA 9281 29 100.0 32 ............................. CGTCGCCTGGCCGTCTGGTAAGTCCGGTTTTA 9342 29 100.0 32 ............................. CAGATATCGGCACCGCGAGGTTCTGAGTCGTA 9403 29 100.0 32 ............................. AGATCGAATAGTCGTAGTTTGTTTTACGGCAG 9464 29 100.0 32 ............................. CTGGAACGGACCCTGAGCGCCTTTGGGGGAAA 9525 29 100.0 32 ............................. ATTTCTCCGGTTGCCCCGGGTTCCCGGGGCAT 9586 29 100.0 32 ............................. GTGCTGGCCTTGAGCTTTTCAGCAATACGTCC 9647 29 100.0 32 ............................. TGCAGACGCGGCACTTTTACCCACGCTTGAGC 9708 29 100.0 32 ............................. ATATTCCGAGCGTTGCCAGCCTGCTGCGCAAT 9769 29 100.0 32 ............................. GCGGCGGCGTTAGAGCGCGCGCCAGCGTTTTC 9830 29 100.0 32 ............................. ACGGCATCTGCGAAATTCATGTTGCTAAATAC 9891 29 100.0 32 ............................. GCTGCGTATAAAGGCTGCAGACCGGAGAGAGG 9952 29 100.0 32 ............................. ACTGCGATTCGTTGACGATTATTCCTCCGCGA 10013 29 100.0 32 ............................. CGTTATTTTAAAAGCTGACGGCGAAGTGGTGG 10074 29 96.6 32 ............................A GCGCACCCGAACCATTACGGGGCTTGCCATTC 10135 29 100.0 32 ............................. GCCGAGTTCGTCAATGCTATGAATTTTATAAC 10196 29 100.0 32 ............................. CCGGACAACGCGGTCAGTACAGATTTCATTGG 10257 29 100.0 32 ............................. TTTTTTTACTTCCGCTGGCGAAGCGGGCGAAA 10318 29 100.0 32 ............................. AGTGGCGTTAAAAATGTCGCGGGTAATTTGTT 10379 29 100.0 32 ............................. TGCTGATTTCGTTTGCAGGGAAAATGGATTTT 10440 29 100.0 32 ............................. GGCAGCGAGGCGCAGATCCCGCAGCTTTACCA 10501 29 100.0 32 ............................. TTCGGCCAATAACCGACTATGTGAGGGACTTT 10562 29 100.0 32 ............................. CCCGATAAATTCACTCTGTGTCATACGGTGAT 10623 29 100.0 32 ............................. GCATCGACGCCCGTATCGTTATCGACAAAATA 10684 29 100.0 32 ............................. ACACGTCGTTAGGTGTTCCGTACTGGGAGAAA 10745 29 100.0 32 ............................. CCAGGCGACCGTATCTGGGTGCGTGAAACGTG 10806 29 100.0 32 ............................. CCGCAAGCCGTATCAACGAATTACTGCTCGAA 10867 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 10925 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 39 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAAATTGTTGTGATAAAGTTGGTGAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGTACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //