Array 1 1065174-1069154 **** Predicted by CRISPRDetect 2.4 *** >NZ_SRLC01000001.1 Hymenobacter aquaticus strain JCM 31653 contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 1065174 29 100.0 35 ............................. AACAATCGGTCGTTGTGGGGCACCCGGGCGGCGTT 1065238 29 100.0 36 ............................. GACTGGTTAATCAGCAGCACGTCGATGACGTTGTCG 1065303 29 100.0 36 ............................. TATGAAATGATGGAAGCTAAGGACGGGAAAGAGCCC 1065368 29 100.0 36 ............................. AGGCTTTTGCCGAAGCCGACAGGCTCGACGCGGCAA 1065433 29 100.0 36 ............................. AGGTGAAGATTCCATAATTGTCAGTGGTTTAGTGTT 1065498 29 100.0 36 ............................. CTTTCGGAACAGGGCAGTGTAATTAGGGGTGTTCCA 1065563 29 100.0 36 ............................. AACCTGAACGACGCCGCGCTGCGGGCCACGTTGCAG 1065628 29 100.0 36 ............................. AGGAAAGTTGTATCGAGCTGCTTTTTCAGGTCGCCG 1065693 29 100.0 37 ............................. GCCGGCACCCACGTTGCAGCAAGCCCTGGCCGCTCAG 1065759 29 100.0 36 ............................. ATTTCCAGGGAGCGGGGCTGGCGGCCTCCGCGCGTT 1065824 29 100.0 36 ............................. AGTAGAAGAACACTACAAGACCAACCCCGAACGAGC 1065889 29 100.0 36 ............................. AGCGTTGGCCAGGGCTTTTTCCTATTTACGACACCA 1065954 29 100.0 35 ............................. AGCATCAGGCCCAGGCTGCCTTCCCCATCGGCCGG 1066018 29 100.0 36 ............................. GTTAAGATGAAGTCGCACAGGGCCAGGATGCGCCGG 1066083 29 100.0 36 ............................. GCTTTACTTCTTGCTCGGCAGGGGGCGGGGTGGCAG 1066148 29 100.0 37 ............................. GGGCAAGTTCACTGTGAGCGTATCCCAGCACCTGTGG 1066214 29 100.0 36 ............................. GTAGCCAGAATGTAGTTGATGATGCTGTAGGCGGTG 1066279 29 100.0 36 ............................. AAGTCAACCCGCCGCGCCTACGCGCTTCCTTGCAAG 1066344 29 100.0 36 ............................. CGGTGACGGGGTGCGGTTCAAAGGCCGGGGGCTGAT 1066409 29 100.0 36 ............................. GGCGCTGGCTTTCACGCGGGCGGTATCCGAATCGAA 1066474 29 100.0 36 ............................. TTCGTAAATAACCACCGGGGAAACCGGAGCCGAGAA 1066539 29 100.0 36 ............................. TGCAAGAAGAGATCTGGGCTGCCCTGTTCGGGTGCC 1066604 29 100.0 35 ............................. AGGTTCGGGCTTTGCTGAGTGGCGGGGTGTTCGTT 1066668 29 100.0 36 ............................. CGCACAGACCGGCTTTACCGTGCTGGGCGGGGCGGT 1066733 29 100.0 36 ............................. AATAGTCGCTGGGTTTGGTATCCAGCAGCGCCCCTT 1066798 29 100.0 36 ............................. TGAAGCTGACCAAGGCAGACCGGGAAGCGGCGGAAG 1066863 29 100.0 36 ............................. ACCGTTTTTGCTGGCGGGAGGCGTGTAGCTTCGGCC 1066928 29 100.0 37 ............................. GCCGTAACGTTACCCGGCTGTTCTTCACTACCGCCTT 1066994 29 96.6 36 A............................ AGGGGCAAAGCACCGTGGCCAGCGGCCTCAACGCCA 1067059 29 100.0 36 ............................. TCCATTTTTTCGGAGCAGTAGGTAGCCGGGCGCGGC 1067124 29 100.0 36 ............................. AGCTGCGGTACCACGTCGCCCACGCGCACAAACCAG 1067189 29 100.0 36 ............................. GGGCCAAGTTCTTCCTGGCCGGCCTCACCTATAACC 1067254 29 100.0 38 ............................. AGGTTATCGTGCCCGGGCTCCTGCACCAGGTTGCGCAG 1067321 29 100.0 35 ............................. AGCTGAGCACGGCCTTCATGAAGTCCTTCATCGGG 1067385 29 100.0 35 ............................. TCGACTTCGCCGCCGCCTCCCGTGGGCAGGACAAC 1067449 29 100.0 36 ............................. AGGTGCTAAGCATTACCTACGCGACGGACACCGATG 1067514 29 100.0 37 ............................. AGTGTAGGCGCTGCTCGGGGAATCATCCCCTAACTCC 1067580 29 100.0 38 ............................. TCGACGGCTGCCAGCTTGAAGATGCGGTGCAGGCGCGG 1067647 29 100.0 35 ............................. GTTTTCTTGGCGGCGTAATCTGCCTGCGTCTTGAT 1067711 29 100.0 37 ............................. TTATGTTTTCCGTCGAGGAAACCTGTGTCATCATGGG 1067777 29 100.0 36 ............................. GTTACCGACACGTCCGAAGATGGACTCCGGCTGCTG 1067842 29 100.0 36 ............................. TGGGTGTTGGCGTAGTTGAAGATGCCGCCGGCCCGC 1067907 29 100.0 36 ............................. GGGTCAAGGTCCTCCAGTAGCGGGCTGCTCTGGCGG 1067972 29 100.0 36 ............................. CCTGGCCACACTGCGCGCCGCGCGCGACGTGGTGCA 1068037 29 96.6 37 ..................A.......... AGGAGATTAACAACTCCCTGCGCTCGATGAAGAAGGG 1068103 29 100.0 36 ............................. TGATCTGTGTACTACCCTAGAAGATGGAACAGTACC 1068168 29 100.0 35 ............................. GAGGCTTTCCAGCGCAGGGCGGGTCAGGGGTTTGT 1068232 29 100.0 36 ............................. GCTACAATCCCAACGACCCTCAGCACTTCTAGCCAT 1068297 29 100.0 36 ............................. TGGGCTGCAGCGGCCCGGCTGATCTACTTGTGTCGA 1068362 29 100.0 36 ............................. GTAGATCATCACGGTTTTGTTCTGGTGGTCGGCGTA 1068427 29 100.0 35 ............................. ACTACAGGCGGGAGCACCAGAAGCGTTTGCACAAC 1068491 29 96.6 17 ....T........................ TCAGCAATTTCACCGAC Deletion [1068537] 1068537 29 96.6 36 T............................ ACCAGCATCAGCATGTTCACGCCAGACGGCTCCTTC 1068602 29 100.0 36 ............................. CGAAGCAGCTCGGTGAATCTGTTGCCTGGGCCGTGC 1068667 29 100.0 36 ............................. GGTACATGGCTTTTATTATGCGCTCTAGCTATCAAA 1068732 29 100.0 36 ............................. TGCTCTGGGACGGGCCGCAGGGCCTGTATCAGCAGT 1068797 29 100.0 36 ............................. TATCTGGTGGACTCGCTGCAACTGCCCAAGCAGGGC TGT [1068813] 1068865 29 100.0 36 ............................. GTGTAACCGCCGCGCATACTGGTCAGCACAAACGTG 1068930 29 100.0 36 ............................. AACTCCTGCGCGGCCGTAGCCTGGCTGATATACCCT 1068995 29 100.0 37 ............................. TGGATCAGCAAAATCCTGAAAATCTACCGGCCTTCGA 1069061 29 100.0 36 ............................. CTTGAAAATTCATACAAAACCTCGCTTCGTTGTTCA 1069126 29 96.6 0 ............................G | ========== ====== ====== ====== ============================= ====================================== ================== 62 29 99.7 36 GCCTCAATCGGACTGTGTGGAATTGAAAT # Left flank : TGCAGATGGAGGAATACAAACCGTTTAAAGCCTGGTGGTAAGATGTACGTATTGCTGGTGTATGATATCCGGGAGAAGCGCGTGGGCAAGATGCTCAAGCTCTGCCGCCGCTACCTGAACTGGATACAGAATTCAGTGTTTGAAGGTGAAATCTCGGAGGTCAAGTTGAAAGAGCTCCTGGCCAAGGCACACGAATTTCTGAACCCCGATGAGGATAGCGTGCTGATATTTAAAAGCCGCAGTCAGCAATGGCTGGAGAAGCAGGTCGTGGGCCAGGAGCGCAACCGGCTGGATACCTTCCTGTAGCCCGGGAGTCGTCTATCAGCCCTAAACCTTGTAGCTGCACTGCTTAAGGAAGTTGCCGTAAAGATTAAGTAATTGATTACCATGGGTCGTCGCTGCCTGGGTAAAAGCTTGTTATTGCCGAGCGACGACTTCGTGCGTTCAGTTTACGGACAAAAATGTAGCTTCAAGCTTTAGTAAGAGCCTTTTTGCGTCGG # Right flank : GCGGCCTGCGCGAGTGTAATGCTTACGCTTCTTACTCCTTCATAGCGAGATTATTGTCATCGTTGTATTCGCACGCTTTTACACATACCAGGTATATATCCGCCACTCCGGGGGCTCGGTTTGACGGCTTGCCAAACACCTATAGCTGTTGCTTGTCGAAACCCTATAACTTACGCGGCACTCTTACCATTCTAGTTTTCCTGCCCTATGCTCGACTTAGTTATCAACGCCCGCCAGGCATCCATCAGCGCCGGCTTCGACGTGAAGCGGATTCTGCCCTTCCGGGCGCGGCGCATGGTGGGGCCCTTCGTGTTCATGGACCACGCCGGCCCCATCAGCGTGCCGGTGGCCCAGCTGCCCGACCTCGACGTGCTGCCCCACCCCCACATTGGCCTGAGCACGGTCAGCTACCTGTTCGGCGGGCAGGTCACGCACCGCGACAGTCTGGGCGTGGAGCAGATCATCCGGCCCGGCGAGGTCAACTGGATGACGGCCGGCAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATCGGACTGTGTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //