Array 1 1099405-1094982 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048812.1 Halomonas socia strain CKY01 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1099404 29 100.0 32 ............................. GTAATCGAGCCGCCATGGATGACGCCTGAGCT 1099343 29 100.0 32 ............................. CATCTTTCGATGTTAACGTTACGTTCATGCGT 1099282 29 100.0 32 ............................. CAACCGCATGACTACCCGGCACGCCTGCAATT 1099221 29 100.0 32 ............................. ATCATTCGATGCGCAAATTGTAGATGGCGTTT 1099160 29 100.0 32 ............................. GCGGTTTGCTCATCGGCATATGACCACACACC 1099099 29 100.0 32 ............................. CTCGCCACTAATCGCCCGTGATATGCCCTCGG 1099038 29 100.0 32 ............................. CCTAGCCGCGCTCACCCTACTTTACACTGCTG 1098977 29 100.0 32 ............................. TCGTATTACCCCAACCTGGCCATCAAGAATCG 1098916 29 100.0 32 ............................. CCTGTGGTGTGCTACAATGATCCTCACCTATC 1098855 29 100.0 32 ............................. CCAGCCTAGCCGCTGCGTATTTTGCCTATGTC 1098794 29 100.0 32 ............................. CGTACATTGCGCAACAGTGGTTCACGCTATTA 1098733 29 100.0 32 ............................. TTGCGCCGATTAGGCCCAACACCAAACGACAT 1098672 29 100.0 32 ............................. CCGTGGACAGCACCGCGAGCGAGGTTGAGGGT 1098611 29 100.0 32 ............................. GAGGTGTGCGACGTCGACCTGAAGGGCGACCC 1098550 29 100.0 32 ............................. TCGGGGAAACGGCTCCAGGCATCGAGCTGCGC 1098489 29 100.0 32 ............................. GCGACCCGCGTCTTCGTCGCCAACGAGCTCGA 1098428 29 100.0 32 ............................. CACAACGTGTTCGTGCGCTTCCCCGACGGCAC 1098367 29 100.0 32 ............................. CCGGCCGCCGGGATCTCCAGGGTGTTGGGCCG 1098306 29 100.0 32 ............................. CGTGCTATCCGGCTGGGGGCTTATATGATTGT 1098245 29 100.0 32 ............................. CATTACTACAATGGTAAGCCGTGCGGTTACGG 1098184 29 100.0 32 ............................. AACGACTGGAAAACGGCCCGCCGCATGAGCGA 1098123 29 100.0 32 ............................. CAACTTTTCGATAGGATGCAATTCTGGAATCA 1098062 29 100.0 32 ............................. ACTTTTGTACATTAGTGGCCGGACATATTCAA 1098001 29 100.0 32 ............................. GTGACATATTTGAGACGACCAGCACCGCTATT 1097940 29 100.0 32 ............................. ACTTTGGATTGGGCTTCTCGCTGTGTCACTTC 1097879 29 100.0 32 ............................. CCTTGAGCCACTGTTCATTTGCGTGCACGCTC 1097818 29 100.0 32 ............................. CATCTGGGCGCGGACTTCAAGCAAGAGCGCAA 1097757 29 100.0 32 ............................. GACGGCTCGCGCATGGGAACCGGCACCCCCGA 1097696 29 100.0 32 ............................. GCCGGTTGGCTTTTTGATGTCACTAAACCAAC 1097635 29 100.0 32 ............................. AACTTGGCAAACTCCTTGTTCGACTTGAAGCA 1097574 29 100.0 32 ............................. AATGATTGCCTTGGGAGTCGGAAATTGATACC 1097513 29 100.0 32 ............................. GTCATGTCCGAGCTACGGGCTACCGCCAAAAA 1097452 29 100.0 32 ............................. AAGGCAGGTGGTGGCTGGAAGACAGAGTTCTT 1097391 29 100.0 32 ............................. TTCTGGCACTTCTCGACCGGCGCCGACCACGA 1097330 29 100.0 32 ............................. CATACCGCCATGTCCGGCGAGACCGTCGGGTT 1097269 29 100.0 32 ............................. TCAAACTGGCGTCAGCTCATATGTGTTTGGCG 1097208 29 100.0 32 ............................. CGCCCAACGAATCGTCATCCCCCTTCGGTATC 1097147 29 100.0 32 ............................. GCCAAGCTCGAGGCGGTCGAGTCGGGCATCAC 1097086 29 100.0 32 ............................. CCCTTGCTTTTGTGCGGGTGGAGCGTAGCGCG 1097025 29 100.0 32 ............................. GGTTTAAGGAGCATGGTGCAGCCCGTTCACGG 1096964 29 100.0 32 ............................. CCGGCAGTAGTGATCACCCACATTAGCGCCTG 1096903 29 100.0 32 ............................. TTTTTAAGCCTGCGCAAGAGATGGTTCGCAAA 1096842 29 100.0 32 ............................. GCTATGCCCATCGCGGCGCTTAACTCGTTGCT 1096781 29 100.0 32 ............................. CCCGAGGATATGACCGACGTGGAGATCTTGGG 1096720 29 100.0 32 ............................. TATTTCGAAAAGTTCCTTCGCCATGTGCAAGG 1096659 29 100.0 32 ............................. GCCGACCCATTGGACGTCCTGGAGTGGGTTGA 1096598 29 100.0 33 ............................. GTGATGCACTCCATCGAGGAGCGGGGCGCACCA 1096536 29 100.0 32 ............................. TCAGCAGTGGAGATAATAGAGTTTGTTTGGGA 1096475 29 100.0 32 ............................. CAGCGCACGCGCGAGAAGCTGAGCCGCCCTGA 1096414 29 100.0 32 ............................. GATGGCATTGTCCTCGGCATGTAGCGTCATGG 1096353 29 100.0 33 ............................. AACGAGGAAAAGCGCAAGGGCCGACAGTTCAGC 1096291 29 100.0 32 ............................. AGTCATCGATCGAGGAATCATCCGTGAAATCG 1096230 29 100.0 32 ............................. CCGCACACTTCCTGCGCCAATGCTGACCACTG 1096169 29 100.0 32 ............................. GCGTGACCGCGCATGTCGGCGGTATTGAATTT 1096108 29 100.0 32 ............................. GTCGCCTTGTCCCATAAACCACGCTGAGCCAA 1096047 29 100.0 32 ............................. CGGCACGCTCCGGCATCGAGCCAACATAGAAT 1095986 29 100.0 32 ............................. TGAGTGCGGGTGATCAGGTAGTCCTCGCCAGC 1095925 29 100.0 32 ............................. AGTCCCTGAAACGTTGAACAATTTGGGGATGT 1095864 29 100.0 32 ............................. CCTGAGCTCAACATTCGACACGCTTTCGAGCG 1095803 29 100.0 32 ............................. GAAAGTGGCCGCCTCACATTAAACAGTGGGTA 1095742 29 100.0 32 ............................. TACATCAGCAAGAACATCAACGGCGAACAGTT 1095681 29 100.0 32 ............................. GCAAACGCTTCGGCGACGCTGCAAGAGATCGG 1095620 29 100.0 33 ............................. TCCACAGCTTAACAACCAACCGCCCCGCCCAGC 1095558 28 96.6 32 .....-....................... CCGCATTATCCATGTCCCCTCCGCTCTCTACA 1095498 29 100.0 32 ............................. AATTAACGGGGGAACGAACGGACTGGCCGACC 1095437 29 100.0 32 ............................. TTGTAGCCGGTGGCACTACTCGTCGCGTAAGC 1095376 29 100.0 32 ............................. CCGTCGGCACCGTAGCGGGCCAGGGTCTGCTC 1095315 29 100.0 32 ............................. GCCGCCTTGTGCTCGGTGACTTCCTTGCGGGT 1095254 29 100.0 32 ............................. TGCTGCGTCGCGCAGAGGTCGAGCGCCGGCGC 1095193 29 100.0 32 ............................. GAGCGGCAGCAGCGCCGACTGCCCGACCTGGC 1095132 29 100.0 32 ............................. TTGTAGCCGGTGGCACTACTCGTCGCGTAAGC 1095071 29 100.0 32 ............................. GGAGTGATTCTTGTCGAGTTCGAGGACGGGGA 1095010 29 82.8 0 ............G..........TT.G.A | ========== ====== ====== ====== ============================= ================================= ================== 73 29 99.7 32 CCGATCCCCGCATGCGCGGGGCTCAACCG # Left flank : GTGAGATCGAACCGCCGCCGCCACCAGCGGACGCTGTGCCACCCGCCATCCCTGAACCGACATCGCTGGGCGATAGCGGCCACAGGAGTCAATAGTATGGCCATGCTTGTCGTCGTCACCGAAGCCGTACCGCCCCGCCTGCGCGGACGGCTTGCCGTCTGGCTGCTGGAAATTCGTGCTGGCGTGTATGTGGGCGATGTCAGCAAGCGGATTCGGGAAATGATCTGGGAACATGTCAACGTCCTGGCGGAGGATGGCAATGTCGTCATGGCTTGGGCCAGCAACCATGAGTCCGGCTTCGAGTTCCAAACCTATGGCGCTAACCGGCGCGAGCCTTGGGATCACGATGGGTTGCGTCTGGTGCGCTTTCTACCCATTGAGGCTAAGTAGTTGATAAACCTAGATCTTTAAAAATTTAGTCTGTACAAAAAATAGGCAAAACCGTCGGTGGAATTTCTGCTGGCGATTTTCCTTTTGTAGATCAAGTATCTACAATTAGT # Right flank : GTCGGGATGTGGGCGTTAAACCGCCCCGAAAATTGATGTTAGGTAAGCGGTTGGGGGGACACCCTTAGTCGCTTGCATCTACCACCGAGGCAGCTCAGAAGTACACTAGTGGAGTAACTGGCACTGACTTCTTTAGTAGTGGTATCTGCAGGAGATTATCGTGATGGAGCCGCCATCCACTGCATAAACCAAGCGGTTTGTCTCATCAATGCGCCGCGACCAGAATCCAGCCAAGTTCTCCTTAAGTGGCTCTGGTTTACCAATACCGTCGAACGGAGAGCGCTGTACATCAGCGATTAACTTATTGATTCGCTTTAGCGTCTTTTTATCCTGACTTTGCCAATAGAGATAGTCATTCCATGACGCCGTAGTCCAGCACAGCAGCCGGCTAGTCGTCTGCATCTATCAGCTCACGTTCGGTTGCCTTTCCAGCCCTGTATTGCGCAATTGACTCATTCAAGTGCTGAGCATTGGCGGGTGAACGCAGCAGATGTACCGTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGATCCCCGCATGCGCGGGGCTCAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCGATCCCCGCAGGCGCGGGGCTCAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //