Array 1 6392-6594 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHXMH010000011.1 Helicobacter pylori strain SHZY51 contig_11, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence           	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	==========================	==================================	==================
      6392	    26	 100.0	    34	..........................	GTGTCGTTATTAAAGTTTAAACCTGTATTGTCAG	
      6452	    26	 100.0	    31	..........................	TTGCTGTTATTAAAAGTGGATTGAGTGCTAC   	
      6509	    26	  96.2	    34	.....T....................	GCGCTGTTGTTGAAGTTTAAGTTAGCGCTGTTAG	
      6569	    26	  84.6	     0	.G..TT...................G	|                                 	
==========	======	======	======	==========================	==================================	==================
         4	    26	  95.2	    33	TAAAGCTATAAGTCCCTTGATTGAAA	                                  	       

# Left flank :   TAAACTTTGAGTGTCTTTAGCGATAATGGTGTTTTGATTGTTGGTGTAGCCTGTATCGCTGCTTGCGATCTTATTATCATTAGTAGCGTTATTTAAAGCGCTTTGGGAGTTACTCAAGTCTTGTTGGTAGGTTTTTTGGGCTTTGGCTTGTAAATTGTCCCCTAAAAATTGGGTGGTAATGGACTGATTGTTAAAGGTTTCTTGTAAGGTTTCATCTTGCCCGTTAATGTCAAAGGTTACATCATAAGTGTTACTACCCACTTCAACATGGCTAATAGCTTTATCGCCCTTATAGTTGATCAAATCCCACAAATAACTTTGATAAACCCCATATTGGATAGTCCCGTTTGTGGTGAGAATGTCATAGGTTTGATTGCTATTAAGGGTTTGATTGAGGTTAAAAATCGCGCCAGAACCAAAAGACACACTGCCTTTAAGGCTAGCAAAAGGCGAACTTGAGTTTAAAGTGTTAGCGCCTGAAAAACTCACCTTGCTTACAT
# Right flank :  GTTCGTTTTATTAAAAGAGAGATTACTGTTAGTCCCATTCCCGCTGAAACTAAAGCCCCCATTGGTGTCGTCTGTAAAGCTAGAAGAGATCACATTGATGTTAGAACCGCTGAAATTCATGTAAGAGTGCTGTGTTCCTGCATCGCTATTATCAAAGCTAGCTTGATTGATAGTGATATGGTTAGTTGCATTAAAATTGAGAGTGGCCCCACCGCCAGTAGAAAATGAGTTGCCGGTTGTGATACGGCTAGAATTAAAATTAATCGTTTGAGAGTCATAAGTGCCTGTGATATACCCTACATTACCTCCATTAACACCCGTGCCTCCAAAACGGATATTCCCTCCCACATTAAGCGTGCCATTATTGAATTTTTGCGTGAAACTAGCCCCACCAGTGCTATAAGTGGTAAGGGTGTTCAAATAGTAAGTCCCAGAGCCTTGAGTGCTGCTAAAAAGACAATAAGAGTTGTGCGTGGGGGAATTAGAACCGCTTTCAATAT

# Questionable array : NO	 Score: 5.62
# 	Score Detail : 1:0, 2:0, 3:3, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TAAAGCTATAAGTCCCTTGATTGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.23%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0   Confidence: HIGH] 

# Array family : NA
//