Array 1 1381-27 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBQA010000019.1 Intestinibacter bartlettii strain MSK.5.6 FBAJCNCD_19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 1380 29 100.0 37 ............................. AAAGAATTTATTGATGAATATGGCATTGATGAAGATG 1314 29 100.0 36 ............................. AATTTAAACTTATCTAATTTATCTTTTTGTTGTAAA 1249 29 100.0 37 ............................. AATACATTGCCAGCAATACCCGTTATAACTATAGATA 1183 29 100.0 37 ............................. TATTATCAAGAGTTTGAATATTTATATAAAAAAAGTA 1117 29 100.0 37 ............................. ACAGGTAACGGAGAAGGAACAGACATATTAAGTCTTA 1051 29 100.0 39 ............................. AGTTATATTATTATTACCTTCTTCTAATATTGGAAAATC 983 29 100.0 37 ............................. TCATTAAACTTAATATTATCTAAATCAAGCAAAGCTT 917 29 100.0 37 ............................. AAAATTTAATCATAGAAAAAAGTTTTGGATAAAAACT 851 29 100.0 38 ............................. TTTCTGCTATGTATTCAAACCTCCATGTATCTTTATAT 784 29 100.0 36 ............................. TGGAAAACAGCAGTGCAAGTTTACATAGACAAAAAA 719 29 100.0 37 ............................. TGCTAAAAAAGATGCAACAACTGGAGAATGGAAGCGA 653 29 100.0 39 ............................. TCTGCAACTACCCACAAACCTAAAATATAACGTTTAAAG 585 29 100.0 37 ............................. TAGAAGATGACGAAATTAAATTAGTTGATAGCATAGA 519 29 100.0 36 ............................. AATAGAATTATTATTATATAAAGGTATTGACAATAC 454 29 100.0 38 ............................. TTAACCCCTATTATGTTTGCATAATAGCCATCTTTCCA 387 29 100.0 37 ............................. GTCATGTTGATTGTCCCTGTCACTCTTACACACTATC 321 29 100.0 39 ............................. CGCAATCTTTCATTTCAGCTTGTATTTCTTGTTCTATAG 253 29 100.0 37 ............................. AAGGGAACTTCTTTAAAAATAACAGATATTAGCAGTG 187 29 100.0 37 ............................. TTTTTACTTTTTTTCTTTTTAGTGTAAGTTATTTCTT 121 29 100.0 37 ............................. GTTATTAAATATTGTCCTACTTCCTCTGCCATAACTG 55 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 21 29 100.0 37 GTTTTATATAAACTATGTGATATGTGAAT # Left flank : GGAAGGCATTAGTGTAAAATATGTAGATCCTGCCTATACTTCACAAACATGTAGTAAATGTGGTCATGTGGACAAAGAAAATAGAACCAGCCAAGAAAAATTTAAGTGTATTGAATGTGGATTTGAATTAAATGCTGATCATAATGCTGCGATTAATATAGCTAGAAGTAATAATTATGTAAAATAAAATAAAAAAATATGTAGTCGATTCAGCGACTAAAGGTTGAGGATATAGGATTAATAGCTAGGATAACCTAAAGCTATCTATAATCACTCGATAAGGGTTAACTCTAGATGTTGTGTTACCGTCTAGACATACATATAGTTTATTTATATAAATTGCAGTGGGCGATATTTGCATATTAATATAGTGGAGAGCTTGGAATAACTAGTCTTGAAGTGTTTTATAAAGTCATATAAAAAACACTACTGGAGGTTCACTGCAAAATTAGTTGATATATGACACTCAAATCATTGAAATTACTATATATTTAGTTGGG # Right flank : TAGTAGAAACTTGTATCAGAGGAGATA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATAAACTATGTGATATGTGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [28.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 177345-175238 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBQA010000001.1 Intestinibacter bartlettii strain MSK.5.6 FBAJCNCD_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 177344 37 100.0 37 ..................................... AATCAAGCATGGAAAATGCTAATAAACAAATTAAAAA 177270 37 100.0 38 ..................................... TGCACAGCTATTATAGGAAAAGGAAAAAATGACTTAGA 177195 37 100.0 37 ..................................... GTTAATGATTTGAAAAGAGCATCATAATCTATTAAGT 177121 37 100.0 38 ..................................... GTTAATAGTTGTTCCATGCCTTTACTTGGACTTGCTTT 177046 37 100.0 37 ..................................... GTGCATATCTTTCTATGTTATTTGGCATTTGCTACCT 176972 37 100.0 37 ..................................... TTATATTATTGTAGCTTTCAATATACTTATCTACTTT 176898 37 100.0 38 ..................................... GATGAACACCATCGTTTGTTAATGATGATTTTAAAATT 176823 37 100.0 37 ..................................... AACGTTCTTTGCTTGAAAGCTTCTGTAAGCCCACTAC 176749 37 100.0 36 ..................................... ATATATATTCTTTTAGTATCGTCAATGGTTCTTGGT 176676 37 100.0 37 ..................................... GCACTAGAAGGCTATAAAAAAGAACAACAAGAGCAAT 176602 37 100.0 37 ..................................... GAAATAAATCTCAAAAGACTTTAAAAGAGTATGAAAG 176528 37 100.0 36 ..................................... TCCCCCTATTTATTCAGATTCAACACAATCGAAATG 176455 37 100.0 37 ..................................... ATTAATCTCTTAGAAGAAGGTCGAATAAAACATATAG 176381 37 100.0 38 ..................................... GACCCTATAGGGTACAGGTTTTAAAACCCCCTAATCTG 176306 37 100.0 36 ..................................... AACTATGGAGCTCTAAAAGGAATGGCAGATGAATGT 176233 37 100.0 36 ..................................... ACTAGTGTTATTCAAGCTAAAAAAATTCCTGTTGAT 176160 37 100.0 38 ..................................... TCAACTAGAGTAGATAAACATAATAATTTAGTAGAAAG 176085 37 100.0 37 ..................................... GTTGCTATAAAAGTTCTAGAAAAATTATCAGATATTT 176011 37 100.0 37 ..................................... GTGGAATTCAAGCTGAGAAAGTTGATTTTAGTAGTAT 175937 37 100.0 36 ..................................... AAAATTCGTTGACTAACGTAAAAAAATGGAATATAA 175864 37 100.0 37 ..................................... ATGATTCAGATGTTATAGAAGGGAATGTAATAGATAT 175790 37 100.0 36 ..................................... AAAGAAATAAGAATTATACCTTTAAAAGAAGAAAAT 175717 37 100.0 37 ..................................... ATAATAATTTTGAAATAACGGAATAGGAGGGAAATAT 175643 37 100.0 37 ..................................... AAATAATATCCGAACTCGAAAGCAACTCTATGAACTC 175569 37 100.0 37 ..................................... GTAACTGTTAATACTGCAGTTACAACAACAAGTGCTT 175495 37 100.0 36 ..................................... GTTGCTATTTTCACCACCTCCAAATTTTTCAAATAA 175422 37 100.0 37 ..................................... AATACAAGAAAGCTTGCTCATTTTCAAGTGTAATTGT 175348 37 100.0 37 ..................................... TCCAATTTATGATTGGAGAACAGAAGATGACTGGGGT 175274 37 94.6 0 ...................................TA | ========== ====== ====== ====== ===================================== ====================================== ================== 29 37 99.8 37 GTTAAAGAGTAAGTTCCATTAAAACAAGGATTAAAAC # Left flank : GTTAGCTTTAAATCAAAATAATATTAAAAAATATACAGCAGCAGATTTAATAGAAAAAGAAGAAATACTAAAAAGAGTACTTATAGGAAATATTTTGTCTTTTTCAAAAGGAATGGATTATACAGTTGACAAAACTATAAAAGTAAAGTTAGACTTAAATCAAATAGATGTTAAATTTAAACAAAAAGAAATGTTAGCTTTTATAGGAGAGTTTTTTATAAACTTTGAAATACCAGATAATTTTGCGATAGGTAAAGGAATATCGAGAGGATTTGGAACTGTAAAAAAGATATAAAATAGATTTTTAATAGTTTTGTTCCTACAATATTATTGGGAATTTTGAACTTTGACAATTGAATGTATTGGAATTACTTGGTTTGAGATAGATGTTAATAAGCTAAAAAATGCAGTTTTTTTATAAAAAATCATTGTTTTGGAGTTAGATGAAAATAAAGTAATACCTCAGAAATCAGTAATTCCAATGGTTTTAGATTCTACGA # Right flank : TCAAAAATGAAAAATATATTGAAATTTAAGAAGGAATTTGTCATATACTAGCAGAAGTAATAAAATTAAGTAATATAAAAACTAAAGAAGGTGATATTAAGCTATGAAGCTAGTTGTTAATTCGGAAGGAGTATATTTGACTAAAGTAGGCGAATGTTTTTGTTTGAAAAAAGAGGGACAGAAACAAGAAATTGCTGCTAAGAAGGTTGAACAAATAATTATAACGACATCTACAGCTTTGTCTACTGATGCTATTGAGTTAGCTGTTGAGAATAATATTGATATAGTGTTTTTAAAAAAGTATGGAAAACCTTTTGGAAGAGTGTGGCATTCTAAAGTTGGGAGCATAAGTACTATTAGAAAAAGACAGTTAAATTTAGATTCTAATAAAATGGGTACAATTTTAGTAAAAGAGTTTTTGACTCAAAAGATGACTAATCAAGTTGAATTTTTAAATGAATTATCTATGAATAGAAGAGATAATAGAAAAATTGAAATAA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAGAGTAAGTTCCATTAAAACAAGGATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 1 199653-197251 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBQA010000006.1 Intestinibacter bartlettii strain MSK.5.6 FBAJCNCD_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 199652 29 100.0 37 ............................. AGTAGAAACTTGTATCAGAGGAGATATAATGGTACAA 199586 29 100.0 37 ............................. AACTTATTTAACGGGTATAGATTGGCAACAAGCTACA 199520 29 100.0 37 ............................. TATTTTTATATAAATTTATATAATTTTATATACTAGA 199454 29 100.0 37 ............................. TCATAATTGTTATTATGTCAGGTGTAAATGTATCTTT 199388 29 100.0 37 ............................. GTTGTTTCAATACTTCCATCTGTATTAACTTTAAATT 199322 29 100.0 36 ............................. GGCGATATTACTTGTCATGCTGGTAAAAATACAGAT 199257 29 100.0 37 ............................. CTTAAATCTATAAATTTATTTATATCCATGTTACTTG 199191 29 100.0 37 ............................. TTGAAGAAATAAGATCTTGCTGTAATAACAGTAGAGA 199125 29 100.0 37 ............................. AAAATAATTCAGGCAATAATTGCAGTATGGAGTGCGA 199059 29 100.0 37 ............................. TGCTTTTCATAGTTTCTTAATAAAGTATATTTTTTTA 198993 29 100.0 37 ............................. TCTTAATATGTCCACAATTAGAACAAGTTTTACTACT 198927 29 100.0 37 ............................. TGTGGAATAAAGTAACATTGCTTTTTCGAAGGACTTA 198861 29 100.0 36 ............................. TACAAAGCCGGAAACACAACAGTCAATGGAATAACA 198796 29 100.0 36 ............................. TTAGAAGAATCTACTATTCCTTTTGTATTTTCATTG 198731 29 100.0 37 ............................. TTTCAAATTGACAATTTTCTAGAACCATATAAGCATT 198665 29 100.0 38 ............................. AGTAGAAACTTGTATCAGAGGAGATATAATGGTACAAG 198598 29 100.0 37 ............................. ACTAATGTTTCCATTTGAAAAGCATTTGTAATTTCGC 198532 29 100.0 37 ............................. TATTTTGGAATATCTAAATTATTTTCTGTAGCATAAG 198466 29 100.0 37 ............................. TAATCTTAATTCTAATGGAAAACCTTCAGGAAATTCG 198400 29 100.0 38 ............................. TCTAAAATGGTATATCCTCGTCATCTATTGCTTGGAAA 198333 29 100.0 36 ............................. TTTTAGAAGATAAACCTTCTATAGTTTCTAAGTTCT 198268 29 100.0 37 ............................. AAAGAATATAATTTTTCTGATTCGTTATATCCATTAC 198202 29 100.0 38 ............................. TCTAAAATGGTATATCCTCGTCATCTATTGCTTGGAAA 198135 29 100.0 37 ............................. GTCACTCTTAAAAGCAATTTTTTATTTAGAGTAGAGG 198069 29 100.0 37 ............................. ATAAATAAATAATCTTTAATAGTATCTTTCATCAAGT 198003 29 100.0 37 ............................. ATTTGTTTTTCCTCTGCTTTTAGATCTTCTATTCTTT 197937 29 100.0 36 ............................. ATTTAACAAGTTCATTTTCAAATATTATTCCAGAAA 197872 29 100.0 36 ............................. TTCAATAAGCTTATCTAAGTCTTTATCTAGCTTATC 197807 29 100.0 37 ............................. TTTGATTATATGTATTTGATTGATGTTTTGGGGCAGC 197741 29 100.0 37 ............................. CTTTATTATTAGAAGAACATCCAGTAACACTAATACA 197675 29 100.0 36 ............................. GGGGGTGGTTAAAATTCTACAAAATGAGTTAGGGGA 197610 29 100.0 37 ............................. TATCATGGGTACTTTCTCATATGATACAGACAGTCAG 197544 29 100.0 37 ............................. CTCAATTTTCTTAAGTATGTTTTACTCTATCTCTAAG 197478 29 100.0 37 ............................. TATCAAGCAGAGATAAAAATGTTTCACGTGTTACAAA 197412 29 100.0 38 ............................. TATTATTGGTCTAACTAATTCTTTTAAAGCTACATTAA 197345 29 100.0 37 ............................. TTGTCAAAGAATCCTCCCATGTCTAGTTCGTAAATCT 197279 29 89.7 0 .......................TAA... | ========== ====== ====== ====== ============================= ====================================== ================== 37 29 99.7 37 GTTTTATATAAACTATGTGATATGTGAAT # Left flank : | # Right flank : TTTTTATTTATAATAACCAAGATAGGAGGAATATATATGAAAAAAATAAAACAAATTGTATCATTTATACTGATTTTTAGTATTACTTTCTCAACTATTTTCATGTTAGATACAAAAGATACATATGCAGCATCTATAAAATATGTTGATAATGCTAGAAGTGGAATAACTTATTCCTATGATTTAGACAAAGATGGTAAAAAGGAAAAAATACTTTGCTTAATAGGAAATGATGAATATGGTTATACACTAGATTTATACATAAATAATAAATTAAAAAAGACTTATTCAAATTTAGAAGCTATACCTTGCGTATCAATTTATGATATAAATAAAAAAGATAAATCATTAGATATTTATGTAGAATTGGTACACGAAAGTATGTACTGTGATTTTGAAATATTAAAATACAATAAAGGAACTATAAAATCGTATACTTTTGATGATAGAATAAGTAGTTTTGATAGCGATAAAGGAATAATGAAATTATCTCAAGTATA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATAAACTATGTGATATGTGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 54738-52007 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBQA010000005.1 Intestinibacter bartlettii strain MSK.5.6 FBAJCNCD_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 54737 29 100.0 37 ............................. ATGGCTTACAGATACTTATAATAGAGCAACTCAATGG 54671 29 100.0 37 ............................. TATAGATTTTCAAATAAAAGCAAAACAGTAGAAATAA 54605 29 100.0 37 ............................. TAGAAGAAGATTATACAGAAATAATTAATATTATAAA 54539 29 100.0 37 ............................. GCTACTAATCTTTTATCAGCATCATATTCTATTGTCA 54473 29 100.0 38 ............................. TTAGGACAAGCTTACTTAATACCATATGGAAAACAAGT 54406 29 100.0 36 ............................. TTAATACAGTATCAGCATCTTTTTTGCTATTAGTAG 54341 29 100.0 36 ............................. GATTGAATAAAGCTAAAAAAGAATTAATCGAATTAG 54276 29 100.0 38 ............................. TATTACTTACTTCATATCCTTCAAAGTCTTTTATAGGT 54209 29 100.0 36 ............................. TTATTAGAGTATCAACTATATCTGGAATATTTATAC 54144 29 100.0 37 ............................. TATACCTTGGACTATCTGTTTGCCTATGCTTGCCATT 54078 29 100.0 36 ............................. GTTGAATAATTTTTTTAGACAAAAACATAAAACAGA 54013 29 100.0 36 ............................. GGTAATTGTTGAAACCAGTTTATCGTATCACTTATA 53948 29 100.0 38 ............................. CAATTTGAAATGATGGACCATGACTTAGTTATGGCCAA 53881 29 100.0 37 ............................. GTATTATTTTCTATTAGTCTTAACATAGTTGCTACAC 53815 29 100.0 37 ............................. ACATTACTAGAAGCTGCAGTAAAATTAGTTATTGAAA 53749 29 100.0 36 ............................. AACTACATTAGGGTTTAAAAAAGAAGACCAAGATAG 53684 29 100.0 38 ............................. GATGCTATTCGAAATGCTATAGCAGAAGGTGCGACGCA 53617 29 100.0 36 ............................. TGCTATGTCATAATCAACGATGGATTAAGTGGAGAC 53552 29 100.0 37 ............................. GAAGTTCTAAACTACTTAGCAAATAAATATCCAAACA 53486 29 100.0 38 ............................. CCATAAGTAAATGAGCTAACTTGTGCTGCTATTTGAGG 53419 29 100.0 37 ............................. ACGAAATATACATGGTATATGTTCAAAGGGCTACAAG 53353 29 100.0 37 ............................. AATAATAGAACTTACACAAAGTATTAACGGGTTTAAA 53287 29 100.0 36 ............................. CTGGAATATTGAGTCAAGCTATCGCCATGAATTATT 53222 29 100.0 36 ............................. CTTTTTATGAAGCTAAAGATGATTTAGGGTATGTAA 53157 29 100.0 37 ............................. AAGTAGAGTAGGAGATTTTCTAAGAGGAGAGAATTAC 53091 29 100.0 37 ............................. ATAGAATATAGATACACATATAACATGGTTGTAGAAA 53025 29 100.0 37 ............................. TAACGAAAGCTTACAGGTAGGTTATGGTATATGAGGG 52959 29 100.0 36 ............................. GTTTACTAAAAAAGAAAGTAAAAAGTTGTGGATGCT 52894 29 100.0 39 ............................. TTTACTTAATTCTATGCAAAAGTATGGAAAAGATTACAC 52826 29 100.0 37 ............................. TCAATTTGACAGTATGTAGCATTTCCTTCAAAATCCA 52760 29 100.0 37 ............................. AGGTAAATGGACATCTAACAGTGTAGGAGCATGGTTC 52694 29 100.0 37 ............................. ATAGTAACAAAATAAACAATAAACTTTCTAGCATGGA 52628 29 100.0 37 ............................. CGAGGTCTGCCTTGACTTTGAGATTCTAACCATTCTA 52562 29 100.0 37 ............................. TCAATTTGACAGTATGTAGCATTTCCTTCAAAATCCA 52496 29 100.0 36 ............................. CACTATCATCTGCCTCTCTGATACTAAGTAAGTCAG 52431 29 100.0 37 ............................. GAGGCACTTGTTGAATATGCTCAAAAAAATCATGTAA 52365 29 100.0 37 ............................. ATAAAGTAGACACATTCAAAAGTATTTGGCACCCTTT 52299 29 100.0 37 ............................. ACAAATGTAATAAGCACTATCAAAGGAACTACAAAAA 52233 29 100.0 37 ............................. TATAAAATTGGGGATTTATGGGTACAAGGTTCTACTG 52167 29 100.0 36 ............................. CTCCATAGTTTTCTGTCTGTTTTATAGTATTATTGT 52102 29 100.0 37 ............................. TTTGAAAATGATGAAAAAATATATAATTGTGATGAAA 52036 29 96.6 0 .......................C..... | T [52009] ========== ====== ====== ====== ============================= ======================================= ================== 42 29 99.9 37 GTTTTATATTAACTATGTGATATGTAAAT # Left flank : AACATTTTATAGGTGATGAAAAATATAAAGTATTGAAAGCATGGTGGTAAAATGTTTGTTATTATTACATATGATATTGCAGAGGCTAAAATATTGAATAAAGTAAGGAAGACTTTAAAGAAATACTTAATTTGGACTCAAAATTCTGTATTTGAAGGAGAAATACTTCCAGGAAAATTACATAAATGTGTGAGTGAACTCGAAAATATTATAGATAATGAAGAGGATTCGATTTATATTTATGAGATAAAAAATAGTAAAAATATACAAAAAAATATATATGGAATTCATAAGAATTTTGATGATACATTTATATAAATTGCAGTGGGCGATTTTTTAATAAAAATACTTCCAAAGTATTGATATTACTTTGTTGGAGATCGGTTTATATAAAAACAAAAAAACACTACTTGACCTTCACTGCAAAATTCAATATATTGATATATTTTTTATTGCTATGATATAGTAATATCAAGGGATATAAAAAATTATTTTTTGGG # Right flank : CAATTTATAAAATAAATACTATATATTAAGGGGAAAGAAATATTATGACAAGAGTAGATATGTTTTATTTAATATTAGTTGTAATTATTGCTATAGCGTGCTTGTTTTGGAAATTGGGTCCTAACTTCTTTGTGAAAAGATTAAATAAAAAAAGTATTTATTGTGAGTATTATTTTATTTTCAACTATTTTAATTGTTGTTACATGTGCATTAAAAATAGAATTTAGAAAATCCTTATGGAGTTATTAGAAAATAAGAATTAAAAAATAAATAAGTTTTTCACAAATATTGTATTATAATATTTTTAGAACACAGTATATATGTGAATCAAAAACAAGGGGGATAACACAATGATACTAGATACTAATAAAATTGAAGAAAAAGCATTGGCAAATTTTAAAGGTGGAGAAAAGGCATTAAATGCAAGAATGCATGTAGACGAAAATAATAAAATAATCTTTGGAAGATTAGAACCAGGGGCATCAATAGGGGAACATACT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGATATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 67525-65159 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBQA010000005.1 Intestinibacter bartlettii strain MSK.5.6 FBAJCNCD_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 67524 29 72.4 6 ...A....A...A.C.AA..A..T..... AAAGGG C [67517] Deletion [67490] 67488 29 100.0 37 ............................. TCATTTGATTAATATAGGTTTGAAGAGATTCAGAATC 67422 29 100.0 37 ............................. CGTGTCGAACACTTATTACTGAATCATCTGAAGTCGA 67356 29 100.0 39 ............................. AAAATTAAATAAAAATATTAAAAAATGGTTGACTTCCAA 67288 29 100.0 37 ............................. AATTATAGAAAAACAGATACATTTATGGCACTTGTAA 67222 29 100.0 38 ............................. CTTAAAATTCTTATAAAGTTATCACATCTACAATCACG 67155 29 100.0 37 ............................. ATAGAAAAGGCCAACTGGACCTATAAACATTTTTTTA 67089 29 100.0 36 ............................. AATTTCTTTAAATTTTACTCTAAATTTAGAATAAAA 67024 29 100.0 37 ............................. TCTGTTACTGATAAATTTCTAGCATCTATATAAGTTC 66958 29 100.0 37 ............................. TAACTGATTATACATTAAGTGGAACATTAGTAGTTGG 66892 29 100.0 35 ............................. TTTTCAGCATCTAATGTAAATTATGTCGAAATAAA 66828 29 100.0 39 ............................. AATTCAGAACGATATAAAAGAATGTTAGAACTAGAAAGA 66760 29 100.0 37 ............................. TTAAGTCTATCAAAAGTTGGTGTCATCAATGTATCTA 66694 29 100.0 36 ............................. AGATTAGCAGCACCTAGATTAGCAGAGGCTAAAGAC 66629 29 100.0 37 ............................. GGAGAAAGAAGGAATAGAAGAAGTATTAGAAAAATTA 66563 29 100.0 37 ............................. ATTTTAGATACATCAGGAATAGCATTTGAAGTAGAAC 66497 29 100.0 36 ............................. TATTTTTCTACTATTTCTCTTGTCATTTTGTGAGCT 66432 29 100.0 37 ............................. TGCATAAATGGAACACTATCTTTTACATAGTTAACAG 66366 29 100.0 37 ............................. GAGTAAATATAGCATAATCTTTTTTATAATCTTCTAA 66300 29 100.0 37 ............................. GTTAAAAGGCTAATCATTATAGATATTGAATCTCTTA 66234 29 100.0 36 ............................. AATTTCGATAAGTCTGTAGGATCTAAGAAAATATAT 66169 29 100.0 36 ............................. CCAAGACTTTCATTTTGTTTACAGAAGTTTCATTTA 66104 29 100.0 37 ............................. GGGGAAAAGATGGAGATTATACATAAAGTATATCAAA 66038 29 100.0 37 ............................. AGTTTTATATACATTTGATAATTTTAAAAAAGCATTA 65972 29 100.0 37 ............................. TATATAGAAAGTAAGGATTACACTTCTATATTGGCAG 65906 29 100.0 37 ............................. GGAGGAAGGGGAAGAATAATGAGAAGACATAAAGTCA 65840 29 100.0 36 ............................. GATCATAAAATTACAATACAGGGTTTATCTACTCAA 65775 29 100.0 37 ............................. CTATAAAAATAAACAACTTAAACTCAAAGAACTTCAT 65709 29 100.0 36 ............................. TATAGACAATAAAAATGTAAGAAGCAGAGATAAGGG 65644 29 100.0 36 ............................. TTTATTGGTGGGGTAAAAGGGGGATAACAAATGAAA 65579 29 100.0 36 ............................. TTCTTTGTATTTCGTTCTGTTTCGTCATATTATATA 65514 29 100.0 36 ............................. TCTTTTTCTGGTACAAAGCAAAATCCACAATTTCTT 65449 29 100.0 37 ............................. GTGATCGACAAGACAGATATGAATGAAGTGTACATAA 65383 29 100.0 36 ............................. AAAAAAGAAAAGGAGGCGCGAGAAAATGCGCAAAAA 65318 29 96.6 36 ............................A CGTATAATTGGAGCCCACGCATCAACAAAACCAAAA 65253 29 93.1 37 ................A...........A TATTTTAGGTATAAGTGAAGATTTATTTTGGAATATA 65187 29 79.3 0 T...........GC.T........CG... | ========== ====== ====== ====== ============================= ======================================= ================== 37 29 98.4 36 GTTTTATATTAACTACGTGATATGTAAAT # Left flank : ATGCTAAAAATCATCTAAAATCTATTGAATTTGGATTTATGATTAGTAGTCTTACACCATACTGTTGTTGCAAGGATATGCTGACAAAATCTCAATATATCGTAGGTGGAATTATGCCAACTGTACTCTTAGGAATAGTTCCAGCAGTAATATCAATTTTCACAGGTTCATTATTTTGGTTTATTATGGGTGAATTAATGATTTTGGCAGGTGGTGGAGATTTGACGATTTTATTGAAATTATTGAGATATAAGAGTAAAAAAGAAGAGATCCTTTATATGGATCATCCGTATGAATGTGGATTGGTTGTATTTGAAAGGGAAAATAACAAAATTTAAAAATATTAATAGATTTGCAGTGAGCGATTTAAAAGAAGAACATATGTATAATTATTGGAAATACTGTGTTTGAAGGGTGTATTTTGGAATTAATAAAAAACACTACTTACACCTCACTGCAAAAATTATATTTATTAGGTAATTTGATTAGGCTATAATATT # Right flank : TGGGCACATGATAGAGGAAAGATAAGATATGCTGAAGATTTTATATTATCTATATGACATAGGTAAAAAATATAATTGATAAGAAATTAAATTATATTTTTTAACAACTATATTTTATCTATGCAAAATATTAAAAATTATTTACTATAGGAAGCTAGACTAAGTTTCAAATCTTCTATAATATCCATTTTAAGATTTTCAGGTTCTATAACCTTAACATTACTGCCCATACTTAAAATCCAACTTTTAATTTCATTATAGCCCCTCATATTAGCCTCGAAAAGGATGTAATCATCAAAATCGGTTATTTTTTGATTATCTACCCAAATTTTTTCTTTTATTATGTACCTAAAATCATTTCGTATTTCTAAAATAACTTTAATTTCATTACCCTTATAAATACCAATACAATTTTTTATATAATTTTCACTTGAAAAATTTTCATCTATGGAATAGTTTTCTTCTAAAGTATTATATTCTTCAATTCTACAAATTTTAAA # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTACGTGATATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [9-9] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //