Array 1 623960-623360 **** Predicted by CRISPRDetect 2.4 *** >NC_011894.1 Methylobacterium nodulans ORS 2060, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 623959 36 100.0 35 .................................... AGGATCCGGCGGACCTTGCCCAACTCGGCCTGGAC 623888 36 100.0 35 .................................... TTGGCCACGCCCGAGTAGACACGCGTGAAGGTCAG 623817 36 100.0 33 .................................... CAGAACAATCTGGCCTCCAACAGCCAGAACTAT 623748 36 100.0 35 .................................... ATGGCGGGTCTCCTACCCGGTGCCGGCGGGGCCAA 623677 36 100.0 35 .................................... AGTTGTGTAGCCGTGCAGATCCAGGGTCGCCGGAA 623606 36 100.0 34 .................................... TGGTGCATCGCGGCCGTCGATGTGGACACGGGGG 623536 36 97.2 35 ........................T........... ACGATCTGTTCTCGGTCCATCGGACCGCGGGAATG 623465 36 86.1 34 ...T..AC.........T........T......... TGCATGCGCTCCTCGAGGCGGAGGATCCGATCGC 623395 36 75.0 0 ......AC..ATC...........T.T..C.....G | ========== ====== ====== ====== ==================================== =================================== ================== 9 36 95.4 35 GTCGCAGTGGGCGCCAGATCCTGAGCGCGTTGGCAC # Left flank : CGGAGGATGAAGAGCTGCAGGGCCTTGAGGAGGAACTGCTCGAGCGGAGTGGCGAGCGCGTCGTCTTCTTCCGCGATCCGTCCGGTGTCGTGCTGCCGACCGATCTCTGGTTCCCGTCAGCGGCCTTCTGGTCGATCGTCCGCGCAAAAACGGTGGGGCGCTTGAGATCGCACTTGGACGCTCAGGCCGAAGCAAGCTATGCTGTTGCTGCTGGCCTATAGGGCCTGCGTTCGTCGGTTCGATGTGCCTCGGGGGTGGCCTAAGAGACCAGCTCCACCGGCCGAAACGATTTATCTGGATCTGGCTCTTTGACACTGCGGCTGCGCGAACCTCAAGCGCTCATGCATCTCCTCGAACGTTCGCGCTCGAGTGAGAGTCCGGATTTCGCTTGGGTTTCGGCTCTGGCCCGTTGTGCATCGGTTGGACCTCGCGCTCATTGCAGGGAGGTTCGCACGGACAGGCGGGAAACCGCTTGTCGGCCAGGCATGTGCGTGCCCGCC # Right flank : GTGCCCTGGTAGATGACGACTCGCGCTCGTTGCAGGGAGGCTCGCGCAGACGAGCGGGAAACTGCTTGTCAGGCAATCGCCTGTGCTGGGTCCGCTGGATTCTGTGTTCGTTGGCACGGGGGAGCCGTGGGAATGCCTACTGCCTGGATGGGGTCGCACCAAGTGCTGGTTCCTGAAGACGTGTGCGGCCATCGCAGTAGATGTAGGGAGGTTCGCGCGAACAGGCGGGAAGCCAATTGTCGGCCAGGCATGTGCGTGCACGCGGTCGCAGTAGGCGCCAGATCCTGACGACGTTGGCACGGTTCCCCACGGCTCCGTCGAACTCAGGCCGGCGGGTCGCACTGAGTGCTCGTCAGCCATTCTCATCCGGCCATGGCAGGTCCCGCCCGCCCTCACGGGCTATCCCCGCTCTCCACAACGCCGATGCCGTCACCTTGACCCGGAACCGCCGGCCTGTTTGTTCTCTTTTCGTTCTAACGCGGAGGGCAGCGTGAGTCTCT # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGTGGGCGCCAGATCCTGAGCGCGTTGGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.60,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 863721-862970 **** Predicted by CRISPRDetect 2.4 *** >NC_011894.1 Methylobacterium nodulans ORS 2060, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 863720 31 100.0 35 ............................... ATCGTGCGGGGCCAGGAAGCCCACCTCGCGGTCCG 863654 31 100.0 35 ............................... TTGGCGTTCCAGGGCTCGAAGGTGACGCCCACGGC 863588 31 100.0 35 ............................... GTCACGAGGCCGATCGGATTGAGCAGGGCGAGCAA 863522 31 96.8 33 .....A......................... AGCGCCTCGGCCCGGTAGGCGGCCAGCGCCTCG 863458 31 96.8 33 .......T....................... TCCAGCGCGGAGAGCTTGTTAGCGAGCTTGAAC 863394 31 100.0 33 ............................... GTCCACTGCGAAACCGCGATGCTCGTGACCTGC 863330 31 100.0 37 ............................... ACCGCCGCTCCCGGGCCTCCTCGGGCGTGGCGCCGAG 863262 31 93.5 35 .C..........G.................. AGTCGAGAGCGAGCGCAGAACGCGCAAGCGAGACA 863196 31 100.0 34 ............................... GCGGGCTGCGACTGGGTTCACTCCGCCAGGTCCA 863131 31 100.0 34 ............................... GGCAGCGAGGCGATCGGCCTCGGCCGCTCGCCGC 863066 31 100.0 35 ............................... AGCAGTCGCTCGGTTGTGCGGACCAGCGACACGCC 863000 31 93.5 0 A......................G....... | ========== ====== ====== ====== =============================== ===================================== ================== 12 31 98.4 35 GTCGCCCCCTCACGGGGGCGCGGATTGAAAC # Left flank : GCCGGCCTGCCTGCGGGGGAGGGTGGCGCGTGCTGATGCTCGTCGCCTACGACGTCAACACGGAGACGCCGGCCGGGCGCACGCGCCTGCGCCGGGTGGCGCGCGCCTGCCTCGATGTCGGCCAGCGCGTGCAGAACTCGGTCTTCGAATGCGAGGTGGAGCCGGCGCAATGGACGGCCCTGCGCGCCCGGCTCATCGGACTGATCGACCCGGAGCGCGACTCCTTGCGCTTCTACCGTCTTGGTGCCGAGGGGCGACGGCGCGTGGAGCATGTCGGCGCCAAGCCCGCCCCCGACCTCGACGGCCCGCTCGTGTTCTGACCGCGCGAACCGCAAGCGCACGGCCCTGCGCGCACCCGTTCGCGCAAGACACAAGCTCCTGCCTTCGCGGCCGAATCCGGGCCGCGCCGGCTGGCATCCGGCCGGGTGAAGCTCCGATCGAAGGACGTTCGCGCGCCTGCGCCGATTTGCGCTTGGCAGGCCATCACTTAAGGTGGCGCA # Right flank : GCGGACATGGTCACGAGCGTGACGCGTGGCGAGCGGCTGGAGGTGCCGATCGGCCAGATGGCGATCGATTGGGACGGCGATGCGCGGCGGGCAGACCCACCGCAGGTCAAGGCCGCGGGAGTGGCTGATGAGCCTGGAAGTGCCAAAGCGGCTCGCACGTGCGAGCCGCTCATGCCGAGATTGCGTCGGCGCCAGCCAATCATGGCTCGGCGGTGCGGAACCCCGCACCACCGGCGCTCAGCGCGATCGGCTCCCGGGCAGCCAGGGTGGTGCCATCGAAGTGGAATGGCTCGATCCGGCGGTCCACCATGCACTGAACCAGCACGGTCCTGCTGTCCTTGGTCCAGACCGCCCCCTGACACCAGCGCCCGATCGGAGCCTCGGCCACCTTCCTGAGGTCCGTGCCCGAGAGCGCATAGATCCGAAGCATGCCTTTGTCGCTGAAGAAGGGCGACGCCTTGGCGAGGTTGCTGCCGTTCTCGATCACCAGCGCAGCATAG # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTCACGGGGGCGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.30,-7.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 5494276-5490221 **** Predicted by CRISPRDetect 2.4 *** >NC_011894.1 Methylobacterium nodulans ORS 2060, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================== ================== 5494275 29 100.0 32 ............................. TTCGAGAAGAAGGGCGCGACGGCCCTTGATCC 5494214 29 100.0 32 ............................. GTTGCAGAAATCCGCCGACTGCGCCGTGCGTA 5494153 29 100.0 32 ............................. GCGCGGGAGATCGTGCGCCTGCGCGACCGGAT 5494092 29 100.0 32 ............................. ATAAGGCGCCCGAGCTGACCGCTCGCGCGGCA 5494031 29 100.0 32 ............................. GCACCTGGAACAGGTCGGGCGGCGCCGAGATC 5493970 29 100.0 32 ............................. TCCGAACAGCACCCAGGTATCGGCATCGACTT 5493909 29 100.0 32 ............................. GTCGAGGAGATCCGCGCCTTGTTTCAGGAGGT 5493848 29 100.0 32 ............................. TAACAGTGCCCTTTAGAATAGAGTAGTTATCG 5493787 29 100.0 32 ............................. TCGGCCTCACGGTCATTGAAACGTACAATGTA 5493726 29 100.0 32 ............................. CTCGGCCACGGCCGCGGGTCGCAAGGGAGGCC 5493665 29 100.0 32 ............................. GGAACCGGATCGATTGCCGCGTTCCCGATTTG 5493604 29 100.0 32 ............................. TATTTACACGCCAGAGCATCGTGCGGCACCTG 5493543 29 100.0 32 ............................. GCAGAGATGCCCTTGACCACATGCCCGGACGG 5493482 29 100.0 32 ............................. TACGGGGCATTCAACTGGCGGGATCAGAACGT 5493421 29 100.0 32 ............................. CTTAGACAACGTGTTAGGCCCGGCTCTCGCAA 5493360 29 100.0 32 ............................. CTAGTGGCCGACAACATCACCTCGAAGCTGCT 5493299 29 100.0 32 ............................. ATGCTCCACGACATGGACGTTCAGGCGGGGCG 5493238 29 100.0 32 ............................. GTCACGGGCATCACGTTGAGCCTATCGGGTGA 5493177 29 100.0 32 ............................. ATCTCGGCAATCGCCTTCATGCCGCGTGCCAT 5493116 29 100.0 32 ............................. AATTACCAGGGCCGCGTGTCGTCCACCGTGAC 5493055 29 100.0 32 ............................. TTCCACCTCGACGCCTGGGTGGCCGGGCTGCC 5492994 29 100.0 32 ............................. CTGGTCACTTCACCATTCTCAGGACTGCCATT 5492933 29 100.0 32 ............................. GTCGACCCGCTAACGGTAGCGGCAACGGACGG 5492872 29 100.0 32 ............................. TCAGCGCCGCCGATGCTGACCATCGACCAACC 5492811 29 100.0 32 ............................. ATGCAACTGATGAAGAAGCACGGCGCCGGACG 5492750 29 100.0 32 ............................. CCCGGGGACGATCAGGCGAGCTGCTTCTGCCT 5492689 29 100.0 32 ............................. CTCGCGGCAATCAGCACGGCGCCGAGCAGGAT 5492628 29 100.0 32 ............................. GACGAGGTGCGAGCTCTCCGCCCGGCCGACGT 5492567 29 100.0 32 ............................. AAACACGGCGCTGGCCGGCAGACGTGGCGCCG 5492506 29 100.0 32 ............................. GTAGACCGGCCCATTTAGCCGGCCGTCAACGC 5492445 29 96.6 32 ...........A................. CGCTGCGGAGCGCCATACTGAGGCGCCACTCT 5492384 29 100.0 32 ............................. ACGGAGACCGGCATGGCCTAGCGCGCCTCTCT 5492323 29 96.6 32 ......T...................... TCTGTCCTTTCCACCGCAGCGGGCGGTGTTTG 5492262 29 100.0 32 ............................. CATACGCTGGACGAGCACTTGAGTTGTCACGT 5492201 29 100.0 32 ............................. TCCGCGAGGTCCAGCAGGTCGTCCGGGGTGGT 5492140 29 100.0 35 ............................. TGGGCCGCCCTCGCAACGCGGCGCTCCTCCGGGCC 5492076 29 100.0 32 ............................. GCTCCTGCGCCGTCCAGGCCGCGGCGATCTTG 5492015 29 100.0 32 ............................. CCAGAACTTGCCCTGGTGCTCCTCACTCACGC 5491954 29 96.6 32 ............................T CCAAGCGCGTCAGGGTGCTTGCGGTAGCGGAC 5491893 29 100.0 32 ............................. CCTTGGGAAGCCTGATGAATGCCTGGTTTCGA 5491832 29 100.0 32 ............................. CACGAGGCGCTGCTTGCAGCGGACATCATAGC 5491771 29 100.0 32 ............................. GCACCGGACGCGGTGACAGGGGGCGCGGAGGC 5491710 29 100.0 32 ............................. CCCGACGTGAAGTCCTTGATTTCCTGGCTGAA 5491649 29 100.0 32 ............................. CTCTGCGCCTCGCTCTGGTGCGCGCTGCGGCC 5491588 29 100.0 32 ............................. ACGCCGATCGGCCGTTTGTGGCAAGTTCTGCG 5491527 29 100.0 32 ............................. GGCACAGTCGCCGCGTGCGGCGTGCCGGTCCA 5491466 29 100.0 32 ............................. CCTGTCGCTCGGCGCAATGGCCAGCCGTGGCG 5491405 29 100.0 32 ............................. CCAACCGCCCGCGCGGACGTGGGTATGGACGT 5491344 29 100.0 32 ............................. GAGGAGCCCAAGGCTGCAAAGCCGCGGCGCCC 5491283 29 100.0 32 ............................. CCCGTGAAGCTGTATCGGCCATGATCCCTGGC 5491222 29 100.0 32 ............................. ATGGCAGGGTTATCCGTCAGCTCCAGATAAGC 5491161 29 100.0 32 ............................. ATTTCCGCATCTGCTGACCCATCTTGGACTGC 5491100 29 100.0 32 ............................. CCGCCGCCGGCCCGCGCCCATTCCGTAGGACG 5491039 29 100.0 32 ............................. CCCGGTGCCGGTGTTCGGATCCGGGCAGGAGG 5490978 29 100.0 32 ............................. CTCTGCACTGCCTCAGACGCGATGCCAGCGGC 5490917 29 100.0 32 ............................. GACTTGACGGCGGTTGTCGCTGCCTTCCGGTG 5490856 29 100.0 32 ............................. CCGCACTGGCTCTCGCCAGCCTGTGGGCTGAC 5490795 29 100.0 32 ............................. TTTCCAAGCCACAGGGTCAGCCAATCCCCGAT 5490734 29 100.0 32 ............................. GCTGAGACCATCGCGTCATAGTTCGTTCTGCG 5490673 29 100.0 31 ............................. TGCACGTCATTGAGGTTGATCCTCCCGCCGC 5490613 29 100.0 32 ............................. GTCAAGAGCTTCCTCGGCCAGGCGCAGCCGCG 5490552 29 100.0 32 ............................. ACGACCGCCGGTCAGGAAGCGCACGCGCTCGC 5490491 29 100.0 32 ............................. TGTTGCGGCCCGCCTCCTGCGCCTGCGCAATC 5490430 28 86.2 32 ........T-..A.........C...... GCCGGCAAGACCACGTTGGCGAGCGAGTTTCC 5490370 29 100.0 32 ............................. CATCGCTACTCTAGCCCGGCAGCGGCGTGCGA 5490309 29 93.1 32 ..........T......A........... CTGACGGATCAGCCAGGGATGAGAGGTGAGGT 5490248 28 75.9 0 ............AG.-.........AGGT | ========== ====== ====== ====== ============================= =================================== ================== 67 29 99.2 32 GTGTCCCCCGCGGATGCGGGGATGATCCG # Left flank : CGGCGATTGAAGACGTGCTAGCCGCCGGCGGCCTGCCGCCGCCCGACGCGCCCACTGACGCCCAAGAGCCGGCCTTCGATGAACCATCCTCAGGCGACCCGGGCCACCGCGGATGAGGAGCTGGGCCTTATGATGGTCGTAGTCGTCGAGAATGCGCCGCCGCGCTTGCGTGGACGCCTCGCTGTCTGGCTCGTGGAGATACGCGCTGGCGTCTACGTTGGTGTCTACTCCCGTCGCACCCGCGAGCGGATATGGGATGAAGTCCGCTCAGCGATCGGCGAAGGCAGTGGCGCTATCGCTTGGAGCACCCCGAGCGACGCCGGCTACGCTTTCGACACCTGCGGCAGGAGCCGGCGCGAGCCGATCGACTTCGACGGTCTTCCTCTTGTTGCATTTCGGCCAGACTGAGGCTCAGCGTTCATCCGCCGGAACGCCTGCCGAACGTCGGTGCGCTCTTTGACATCGTGAAACACGAGTTCTTCAAAGGCTTTATCGGAAGA # Right flank : GCGCGGCTCGCAGACCGGATGCAGTCGACCGGTGCAACAAGTTTCACGGGCGGCTCCTTCTCGATGGGCGACGTCAACATCACCGTCGAGAGCAAGGGCTCGTCCGGCAACCCGAAGATGGACGAGGCCAACAACCGCAACCTCACCGCACAGCTCGAAGTGATGATGGACCAGAAAATCTCGGAATGGGCCGCCAACGCCATGCGGCCCGGCGGGATGCTTCGCAAGGCGGGGGCACGACCGAGTTGACGGAAGCTTCAGTGGGTGACAAAGGAAGTCGAACACGGTTGACGAAGCATCGTAGACTAGGTAAGGCGTAAGAAAAACTCAAGACAACGCTTGCTGAGCGGGTCCTGAGGCGGTAAAGAGGATGCAGCCTGCACCTTTGCGGGCTCTCTGCTCCTGACTTCTCCCCGCGGCTCCGAAAGGACCGCGGGATCCCTTTGAGGATCGCCATGACGCGCCCCGTCATTTTCGCCGCGGCTGACCCGGAACTTATC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTCCCCCGCGGATGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTCCCCCGCGGATGCGGGGATGATCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 6089164-6088406 **** Predicted by CRISPRDetect 2.4 *** >NC_011894.1 Methylobacterium nodulans ORS 2060, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ======================================= ================== 6089163 30 96.8 35 ............-.................. TTCGCCGGGATGCAGCAGCCGCAAGTGGCGCCGCC 6089098 31 100.0 35 ............................... CACGACCTGCTGTGGAACGACCGCTACGGGTTGGG 6089032 31 100.0 39 ............................... CTGCTAACCCCGGCCGGCGATTTCGACACGACGCAGGAA 6088962 31 100.0 34 ............................... TTCGGCCTGCAAGCGGTCGGTAAGGCGATCAGCG 6088897 31 100.0 35 ............................... GGCCCGCGATTACATCGACTGGGTGTTCGCCGCGT 6088831 31 100.0 34 ............................... AAGGCCCTGCGCTCGGGTGACCAAGCGGCAATCC 6088766 31 100.0 35 ............................... CGCGACGCGAGCATGAAGGGGGTCGACACCAACCG 6088700 31 100.0 35 ............................... TCGGACGCCACGGTGACGGCAACGGGCCCGGCCTC 6088634 31 100.0 35 ............................... ACGGGGCGGAGCTGCACCCTGGAGTGGGGCCTGAC 6088568 31 100.0 35 ............................... GGCCCGCGATTACATCGACTGGGTGTTCGCCGCGT 6088502 31 100.0 35 ............................... GAGGACTCGGAGCCGCCGCGCATCCTCCGCGGCCT 6088436 31 77.4 0 .......C.......A.......C.C.GCC. | ========== ====== ====== ====== =============================== ======================================= ================== 12 31 97.9 35 GTCGCCCTCTCACGGGGGCGCGGATTGAAAC # Left flank : GCCCCGTCCTGAACGGGCCGGTCGCCGGTGATGCTGGCGCGCAGCTCCGTCCAGGCCGTCTCGGGCTGGGCCTCGTCCTGGGCGAGGGCGGTTCCGGCGAGCAGGGCCGCCATCGCCGCACCGGCCAGCGCCGGTCTCCAGGGGGATCGGGTCATCGCGCGCTCCTCATCGGTGTCCTCCGTCGGGGCTGGGCGTCGTTCGCCTCTCGCCATGGCCTCAGATGTAGGCGCCGGCGGCCCGGCGCGCCATGCCGATCTCCGGTCAAGTGCCTGACGGCAGGGGGCTTTGCGTCCCGCTCGCCGGATCGTGGGCGGCCCCTCGCCCGCGCGAACCTGAAGTGCCGCGCCCGTGCGACGAGGGTTCGCGCGTCCGCAAGTCCTTGAGAACTCGCGCCTTCGCCCCGCTGCTGCATGCTCGGCGCGGCATCCGGCGCGTTCGTCCTGCCGGTTCGCGCGCTCGCGCCCGTTCTGCTCGGCTTGGGAGTGGGTTACACTTGGGCC # Right flank : GAGAGGTCGACCCGACACCAAGTCCTCCGGAACGCGGGACACGGCCTGCGAGGCCGCGTGCGGCAGTCCGGCCCCCCACCCGCACGTTGCACCCGGCTCGCGATCCGGCATAAGCGCGGGAGACGTCCCGCGCAGATCCCCGTCGAGGTTCCCGTGACCGCGCAGCCTTCCGCCCTCACCACCCTGCTGCCGGATCTCGGCCGGCGCACCCTGGTCATGGGCATCCTCAACGTCACGCCCGATTCGTTCTCGGATGGCGGGCGCTTCCAGGAGCGCGAGGCCGCCGCCGCCCAGGCCGCCGCCCTCGTGGCGGAGGGCGCCGCCATCCTCGACATCGGCGGAGAATCCACCCGGCCCGGCCACGTGCCCGTCTCCGCCGAGGAGGAGCAGGCCCGGGTGATCCCGATCCTCGCCGCCCTCGCCCCCACCTGCCCGGTCCCGATCTCCATCGACACCTACAAGGCCTCCACCGCCGAGGCCGCCCTCAAGGCCGGCGCCCG # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCTCTCACGGGGGCGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.60,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //