Array 1 2003709-2000676 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGNH01000001.1 Klebsiella pneumoniae strain NCTC9132, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2003708 29 100.0 32 ............................. ACAGAAACCAGCAGCGCTATAACCTTGAGGGG 2003647 29 100.0 32 ............................. ACTGCGATTCGTTGACGATTATTCCTCCGCGA 2003586 29 100.0 32 ............................. ACCCAGCAGCGTCTGCAGGACTTCGCGGGGAT 2003525 29 100.0 32 ............................. CTCATAGGTATAGGCTGAGTTAACTGAACCGG 2003464 29 100.0 32 ............................. GCTCGCAAGTTACATCGCTGCTGTGAGTGTCA 2003403 29 100.0 32 ............................. GTTTCGCACTCGCCGTTCTGACTGCTGCGCCA 2003342 29 100.0 32 ............................. GATCTCGATGAGGAGATTCAGATTCAGTGTAT 2003281 29 100.0 32 ............................. TCATAGCCGCCGCCCATGCAACGCGCTATCAG 2003220 29 100.0 32 ............................. CTGGCGATCATTAACGAGCCGCTGGGTAAAGA 2003159 29 100.0 32 ............................. CCGCTAAAAGTACCTGTTGTCCCACCAATACC 2003098 29 100.0 32 ............................. CCCGCGGGGATCTGATGATCCTGGGCGGAAAC 2003037 29 100.0 32 ............................. GTGTGAGAGCAACCACAGCAATGACGAAGAGT 2002976 29 100.0 0 ............................. - Deletion [2002948] 2002947 18 48.3 32 -----------CTG.A............. TATCGCATCCGTGAACTGCCGGTGCTCCAGAA 2002897 29 100.0 32 ............................. AGCGCCGCTGGTGATTCTGGCGAAGAGGACTT 2002836 29 100.0 32 ............................. GGTTTAACCGACATTCTCTCGCCCGCAGTAAT 2002775 29 100.0 32 ............................. AAACGATAAGGCGTCGGTTACGTGAGTTTTGA 2002714 29 100.0 32 ............................. CGCCGATCGTGTTCAGTAGCAACGGGTATGCC 2002653 29 100.0 32 ............................. TTTTACATCTCCCCCAGGAGACCTTGGGGGAA 2002592 29 100.0 32 ............................. CCCGCCGGGATGGATTTAACCCCGCTCTTTTC 2002531 29 96.6 32 ............................A CACTGGCAACCCACACAGAGCGGGTGCCTCCC 2002470 29 100.0 32 ............................. GCTGATTTAATTGAGTCGTGGACGCCCCCTGA 2002409 29 100.0 32 ............................. TTGGCGGCCTGCCGGCGGTTTACGCGGCGGGC 2002348 29 100.0 32 ............................. GTGTATAGCGAAGTGAAGCAAAAAATGGTTAA 2002287 29 100.0 32 ............................. CAATCGTAATTTCCAGTCAAGGCGGCTTTACG 2002226 29 100.0 32 ............................. CGGGGATCGAGGATTTCCGTTTTCACGACCTC 2002165 29 100.0 32 ............................. GCTACGGTCAGCGCAGGTGATGGCTACCCAGT 2002104 29 100.0 32 ............................. TGGAGTCTGGTGCATTTGACGGCGCGGTATTA 2002043 29 100.0 32 ............................. ATCTTCGTCATTGCGATACATACTCACTGCCT 2001982 29 100.0 32 ............................. CCAGCGGATATGCTCCACGACATGATCAGCGC 2001921 29 100.0 32 ............................. TAAAATCGATACTTCATTCGCTGCCAATAAGC 2001860 29 100.0 32 ............................. CGTCGCTGAATCTCCCAGCCCCAGGTTCGCGC 2001799 29 100.0 32 ............................. CCATCAATTTCCGACGTTTTATAACGTCCCTG 2001738 29 100.0 32 ............................. ACCAGATAGAGATCCACATTGAGATTAACCCG 2001677 29 96.6 32 ............................A CGCGGAACCGTAATTCATGCATAAAATTTTTC 2001616 29 100.0 32 ............................. GGAATGGGAGACTGGCGTTTCATGATTAGTGA 2001555 29 100.0 32 ............................. CGCCCACGCTTTCTGGTCCATCACAGCGATAT 2001494 29 100.0 32 ............................. CGCCCACGCTTTCTGGTCCATCACAGCGATAT 2001433 29 100.0 32 ............................. TTGCGCTCGGCGGCGCTGTTTCAACCGCCAGA 2001372 29 100.0 32 ............................. GCGGCGGGTTTATGGGGAAAGACTGGGACAGT 2001311 29 100.0 32 ............................. AACTCTGGCCCCTGGCGCGGCGCCAGGATATC 2001250 29 100.0 32 ............................. CAGCCAGCCATCTGCCGTTGAGTCGATGCTGG 2001189 29 100.0 32 ............................. GGCAGTCCAGTTATGGTTCGGGTCCGCTGTGG 2001128 29 100.0 32 ............................. GGGCTCAAGGCCGTTATTTTCTACGTGTTGAA 2001067 29 100.0 32 ............................. GATGCCAAAAAACTGTTTGCGTTTGCGTGGGC 2001006 29 100.0 32 ............................. CCGCAAGCCGTATCAACGAATTACTGCTCGAA 2000945 29 100.0 32 ............................. CCCCCCACTCGGTACGCATCATGATATTGAGC 2000884 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 2000823 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 2000762 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 2000704 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 51 29 98.4 31 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCTGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //