Array 1 10485-9194 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJDMK010000055.1 Holdemanella sp. DFI.5.55 GGENLCKK_55, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 10484 36 100.0 30 .................................... ACTATTTAAAAGATATTTTCATTGATTATG 10418 36 100.0 30 .................................... ATTCCTTTAAGTCCAAATTGTTGTAATGAG 10352 36 100.0 30 .................................... TTGACTGTATCAGACTAGACCATTTGACAG 10286 36 100.0 30 .................................... AGGTTATTAGAAAGACAATTGAAAAATATG 10220 36 100.0 30 .................................... ATTTGGACATGAATGAAACACTCACAGTCA 10154 36 100.0 30 .................................... CTAAAGCAAAGAAATACACAGACACAAATG 10088 36 100.0 30 .................................... TTGACGATTGAGGACTTCAATGCGAGACTT 10022 36 100.0 30 .................................... TTGGAGACACGAACAAGACGATCATACGAT 9956 36 100.0 30 .................................... GATGATACCACTTACAACACTTCCAACTAC 9890 36 100.0 30 .................................... TGCGGTATGCCTGAACAAATGTTGAACAGT 9824 36 100.0 31 .................................... ATGGAAGTATTGTATATTGTCAATTTAATTG 9757 36 100.0 30 .................................... GATTTGAAGAAGAAAGAGTAAATAAACGAA 9691 36 100.0 30 .................................... AAAGGCTTCAACGAAACCTACGTGACCATA 9625 36 100.0 30 .................................... TTAGACACATTGTCTAATTTGATTAATGGA 9559 36 100.0 30 .................................... GTGGAAGTTATAATTATATGTATTGTCGAA 9493 36 100.0 30 .................................... TGCAATGGGCAAGTCTAACAGTGGCAGACA 9427 36 100.0 30 .................................... GAAGCGTGAAAGCTACCTTTAAAGGTTCGC 9361 36 100.0 30 .................................... AACACTACAGGAGGAAGCTTAATATGACTA 9295 36 97.2 30 ..............................T..... GTGGAAGTTATAATTATATGTATTGTCGAA 9229 36 77.8 0 ..............AAG.............T.TCGT | ========== ====== ====== ====== ==================================== =============================== ================== 20 36 98.8 30 GTTTTGTTACCATATGAATTTTTGCTAGAACAGAAC # Left flank : AAACAATTGATAAAAATGTTGTCACCATATTATGAAGACGAATTACAAAAAGATGAATTTGATCTGACGAGAGATGAATTGATTTTGTTTCAATTGGATTTAGTTGAATATATTTCCAATCATAATTCAAAATATGATAATGTCTTTGTCTTTGGCAAACTAGATAATTTAAGTGATAAAATTCTTCAGAAAATCAATAAAATTGAGAATGTTAAATTGATGATTTTTACAAATTATTACAATAATTTAATGAATGTACAAAACACATCTTTATTGCAAGATAAAATAATAGATTTAGCAGACATGGAACAAATTTATTACGACCTATCACAAAAATCACTTCAAACATATACGTTACAGGAGGTAGAACAAATGACAATTGATTATTTACAACAAATATACACTCATAAAACACACGATATTTATCAAGAACTAGATCATTTTTCAATTAAATAATTAGTATTCTATTACATTCAAAAATGTGCTACCATATTTTTGAG # Right flank : TTATTTCTCTTGTGTGACATTGACTACCGCATACTCACATATACCCTCTGTTCTCATTGTAAAACCTCAACCAACAAGGCCTGAGCTAATGATTTTTGTTTGTGTAGTCTTTTCTGCCGATTAGAGTTATGTTGTTTAAATGTACTTCTTGATCATTTAGAATGATAATATTGTTTTTAGTGATTTTGTGATTGAGTTTATTTCTTGTGAATTTTGTTTTGCTTTTATGATTGCCATATACAAAATAAACAGGGGATACTTTAGTAAGTCTTCCAATTTGTTTAAATAGGATTTCCATATCTTCTTTTGATGTGGATTCATCCACGAAGTCTTTGCTAAGTAGATAGAAATTTGGCTTTACTTTTAATAATGTATTTGTGATTTCTTTTGTTGTTGTGATGTTGTAGGTGGACATATTCACAGAACCAAAAGTTACGATGTGGATATGATAGCTGATACTATTATGCAGAATATTGGTTTTCTTTTCTTGAATACGATTA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGTTACCATATGAATTTTTGCTAGAACAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTGTTACCATATGATTTTTTGCTAGAATAAGAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //