Array 1 60346-57437 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDEO01000018.1 Halomonas caseinilytica strain DSM 18067, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 60345 28 100.0 32 ............................ TGGATGCGAGCGATGGCTGCCCGGTGGGCGCT 60285 28 100.0 32 ............................ AGTGCGGCTGCCGAAGATGGCGTGCCAATCCC 60225 28 100.0 32 ............................ TGCTCAGGCGGCACGAACAGCCGAGTCGTCTT 60165 28 100.0 32 ............................ ACTGCCCGTGGTCACGCTCGACGCCAGCCACA 60105 28 100.0 32 ............................ CAGCGCAATTCGCCACGACCATTTGCCATCCC 60045 28 100.0 32 ............................ GATAGGTGGATGCGATCTGCTGGCGCGTGCGG 59985 28 100.0 32 ............................ TGGGCGACCTCAGTCCGCCATAGCGCCACGTC 59925 28 100.0 32 ............................ GTGCGCCGCTGGTGCCGCGAGGGACACGTGCC 59865 28 100.0 32 ............................ TCATCGCCAAAGATACCGATACCGCCGGCAAA 59805 28 100.0 32 ............................ GGTGGCCCAATGCGGTCGATACCCCCACCAGA 59745 28 100.0 32 ............................ TGATCATCCCCGCCCTGCCTGGCTCGCACCGT 59685 28 100.0 32 ............................ GTCGTGAAGCGCTCACGGAGAGGTTGTTGATA 59625 28 100.0 32 ............................ TCGGTCGATGGTCAGCTCGGCGAACCCGACGC 59565 28 100.0 32 ............................ TCGAGGGTCACGGTTCCGGCCTGGTCATCGTA 59505 28 100.0 32 ............................ TACCGATTTCGCGACGTGCATCGCATATACCG 59445 28 100.0 32 ............................ CGACGCGGAGCGCCGAGTTGATGATCTCCTTG 59385 28 100.0 32 ............................ TTCATAGGCGAGCTCAGAAAGCGCTATAACGT 59325 28 100.0 32 ............................ GTTGAGTCGTCGCGATGCACGGCGTTGTACTC 59265 28 100.0 32 ............................ ATGACCGACAAGGCCCGCAACAAGAAGCGCCC 59205 28 100.0 32 ............................ AGTGGCCCGAAGGGTAGCCGCGATCCGCTCAA 59145 28 100.0 32 ............................ TTAGAGGTTGACAAACACCTTTAGGTGGTCAA 59085 28 100.0 32 ............................ AAGGCCCGCGACTGGCTCGATCGTGCCGACAA 59025 28 100.0 32 ............................ TGGCAGGAGTGCGTGCGCCGGTATGACCGGAC 58965 28 100.0 32 ............................ TATGGCGTGCTGTTCCCCCGGCGCTCGGTGCT 58905 28 100.0 32 ............................ TGGTTGCCATCAACATCCTGACGCTGGTTTAC 58845 28 100.0 32 ............................ CGGGGAACGGCAAGTTCTCCGTGGCGGACCCT 58785 28 100.0 32 ............................ ATCACCGCGCCGAGCCGCTTTCATCCGGTGCA 58725 28 100.0 32 ............................ ATGCTCATCTCACCCTTGAGCAAGGCCGTCTG 58665 28 100.0 33 ............................ ACGCGATTTGATGGACAACGCCCATAACTACGA 58604 28 100.0 32 ............................ TGGGCCAAGTTCCGCGACTTCCAGGCCCGCGT 58544 28 100.0 32 ............................ TGCATGCTCAGCATAGTGCGTCACGTCTTGAC 58484 28 100.0 32 ............................ ATCTTGGCGTTATCATCTGCCACCTCGAACAC 58424 28 100.0 32 ............................ GAATCGTCGCCTCGGCCAGCGTGGCCGCGTGA 58364 28 100.0 32 ............................ TTGAGCTCGACCACGTCCCCCATCACCAGGTC 58304 28 100.0 32 ............................ CAGGTGAGCACCCTGGGGTAGCACGTCAGTGG 58244 28 100.0 32 ............................ TTCATAGGCGAGCTCAGAAAGCGCTATAACGT 58184 28 100.0 32 ............................ TGAAAAGAAGCTGGAAGAACTTCTACAGGTGT 58124 28 100.0 32 ............................ AGCAAGGGCAGCGTCAAGGTACCCTACAACGA 58064 28 100.0 32 ............................ CTCAAGGCATGGGCACGAGGGGACGAGCACCC 58004 28 100.0 32 ............................ TCAAGGTTGTTACGGGTGGTTTCCAGGGAGTT 57944 28 100.0 32 ............................ TGGTGGTACCGCAGGTCGCAGCGGAGACGGGC 57884 28 100.0 32 ............................ AACAACAACGCCAGCGCCGCCACCACTGGTAT 57824 28 100.0 32 ............................ GCGGCGGAGATGGCGCCGTAGCTGGCCATGAG 57764 28 100.0 32 ............................ TGACGTTGTTCGCGGTGATGCGATTCCCCAAC 57704 28 100.0 32 ............................ AAGACCCGTCCGCCCTGGTCATCCCCAAAGCG 57644 28 100.0 32 ............................ CTCCTGGTTGATGGCCTCGAGGGTCTCGAGCA 57584 28 100.0 32 ............................ CTGGACGCCTGGCTGCGCGAGAGTTCGCCAAG 57524 28 100.0 32 ............................ TCCTCGGGCACGTAGGCCAGGATCTGGCGGGC 57464 28 78.6 0 ........T...........T...CTCC | ========== ====== ====== ====== ============================ ================================= ================== 49 28 99.6 32 GTTCGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : CCGCCTTGAACAGCTGATGGCGCTCCCGTGGCTGGCAGGTATGCGTGACCACGTAGAGCTGGCGGATATTGCACCGGTTCCCGCGGACGCGTGTCATCGTCGTGTGGTGCGCCGGCAGTTCAATACGGGTGGCCCAAGCCGGGTCAAGCGCTATGCGCGTCGCCACGACATCAGCGAAGAAGAGGCGCGCCAATGTATGTCGGCACCCGCTGAGCGCAAGATCTCTCTACCGTTCGTACAAGTGAATAGTCGTTCTAGTGGGCAACGGTTTGCGTTGTTCATTGAGCATGGGCAACCACAGGTGGCACCGGTGGCAGGGCGCTTCAATCATTACGGGCTGAGCCGTGAAGCGACTGTGCCCTGGTTTTGACCCTTTTTTGAGAAGCCTCTATTGAGGCCTAGTAAATCAATAAGTTAGCGCCATTTCCTGGAAAAGGGTGTGGCGCTTTCTTTGTAGGAATGCTCTTTAACAATCAGCTGGTTAGCTGTGATAAGCTCTT # Right flank : CCCCTCACTTCCTTCAACCGATCGGGGAAGTTGGTGAAGAGGCCGTCGACGCCCCAGTCGAGCAGTTGGCGCATCTGGTCTTTCTCGTTGATGGTGTAGACGTGCACCAGCAGGTCGTTGGCATGGGCCTGGTCGATGAAGTCGGCGTCGATGACCGGCTGACCGTCATAGAGGTAGTTGGGGCCGACCCCTACGGCGTAGTCGGCGATGGCCTGGAAGTCAGCGTCGGTGATGTCGGCCGGGCTGGGGGTGACGCCGGTCCATTCCTCGAGCGTCTCGCCGTCTTCGCTGGGGGAGTACCAGAGCAGCTGGATCAGCGGGATGTCGGGGTTGAGGTCGTGCACTTCCTCGAGGCTGGCCTGGCTGAAGGACTGGATGACCACCGAGCCCGAGCGCACCAGGCCTTCGGCCTCGAGCTTGCTGACCAGGGCGTCCTGCAGCTCGGGGTAGTCCGCGGGGGATTTGGTTTCGATGTAGTAGCGCACGTCCTGGCCGTAGCG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //