Array 1 16501-13602 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHKPQ010000046.1 Gilvimarinus agarilyticus strain E3M09 E3M09_D3R01_contig_42, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 16500 29 100.0 32 ............................. ATGCTGGGCATTTTTACCACGCGGGGAGCAAA 16439 29 100.0 32 ............................. TGGATCGTCGAAGTCTGCGTGTCTGGAAAACG 16378 29 100.0 32 ............................. TGTGAAGAGCGGATATATAAAGAAGGCCATGT 16317 29 100.0 32 ............................. GTATCGCTCTTGATTGGCATTACTTTGGGGGC 16256 29 100.0 32 ............................. AGCCCAACGACTTGTTCAGCGCGCTAATTGAT 16195 29 100.0 32 ............................. CGCGAACACCTAGAGCAATGGATCCAGGGCCG 16134 29 100.0 32 ............................. AGTGCGTTGATTGGGGCTGGAAGCGTCAGGAC 16073 29 100.0 33 ............................. AGAGGCATTCCCTCCGCTAGCATCAACCCATGC 16011 29 100.0 32 ............................. CTCAGATTCAGCAGGCTTTGGAGTTGGCTCAG 15950 29 100.0 32 ............................. CGACCGGAGACAGAAAAATGCAATTAACGCTG 15889 29 100.0 32 ............................. GTGATTGTTCACGCGCTACCCAAGCTTTACGA 15828 29 100.0 32 ............................. GTATGAGTAACGCAAATCAAGTAGTTGAGCAC 15767 29 100.0 32 ............................. CCAAGGGCACTTTTCCCCATCGCCGGGCGAGC 15706 29 100.0 32 ............................. CAGATGACTTCATTGACGATCCCGAAGCGGCC 15645 29 100.0 32 ............................. GTTAAAATCGAGAATCTCGGTGGCGTTACAGG 15584 29 100.0 32 ............................. CGTATAGCATGACCGACGAACAACTTGAGATT 15523 29 100.0 32 ............................. CACCGCTAACCGTGGTCAGCACCGTGATAGCA 15462 29 100.0 32 ............................. TGTGACGCCTTTGAGCGCACAGCGGAAATCAT 15401 29 100.0 32 ............................. CTCGCACCGGAGCAATCACCGCGAGCATGTTC 15340 29 100.0 32 ............................. ATGAATTGGTGGAGGTGTTAGAAGAGCTTGCC 15279 29 100.0 32 ............................. TGAGAAACACTACAAAAATGCCTTAGATGTGT 15218 29 100.0 32 ............................. ATGTGATCCGAGCGGGTGGGAGGCCCGCCTTT 15157 29 100.0 32 ............................. GCCACTTAAACCACCTTCGGCCATGGCACCTG 15096 29 100.0 32 ............................. ATATTATCGCTAGACAGCCTAAAGAACTTTGT 15035 29 100.0 32 ............................. CGCAGATGCGGGAGTGGTACATCAAGCTACTC 14974 29 100.0 32 ............................. CGATCCGGTGAAACACCGGTTAAATTAGCCAG 14913 29 100.0 32 ............................. TGGATCGTGTACGTCGCGGGCTCATCTGTTTG 14852 29 100.0 32 ............................. CATAAAGAAGGCGACTAGAACAACGATCAGAA 14791 29 100.0 32 ............................. AACGTTCAGGCGCTGTATATTGTTGTGATGAT 14730 29 100.0 32 ............................. AGATACCCAAAAGCCGGGCACGGGTAATACTG 14669 29 100.0 32 ............................. GGTGGCTTCTCTGTTATCACCACCGATCTTAT 14608 29 100.0 32 ............................. AGTTTGAAGCCGTGGCGGCTCGCGAAAAAGAC 14547 29 100.0 32 ............................. CGTACGGCCTCGCTCACAATAACAGCGCCTAT 14486 29 100.0 32 ............................. GAGAGATTGAAACTCGAGTTATTGCCGCTCAT 14425 29 100.0 32 ............................. CGTAGACGGCAGACAAACCGAGGGCGTCGAAG 14364 29 100.0 32 ............................. TTTGTTTGCAGGGTTCGACTCTGGATCATCTA 14303 29 100.0 32 ............................. TTACCCGCCCCGGCATTCCTTAGCGGCTTTCA 14242 29 100.0 32 ............................. TCTGCCGCCCCGGCTGGCTGGCCCTGTATTTG 14181 29 100.0 32 ............................. GTCAGATTCCAACTGAGGGTCAAGCTCAGGCG 14120 29 100.0 32 ............................. GTTTTGTATATCTCTTGCGGCTTTTGGGTTGT 14059 29 100.0 32 ............................. CCGTCATTGAGGCCTCGGGCGGTTTCGACCAG 13998 29 100.0 32 ............................. GTTTGGGAAATGGCCTACTTCCTCCCACCGTG 13937 29 100.0 32 ............................. CATTTAATCGGGCATTACGGGATTTAAAAACG 13876 29 100.0 32 ............................. GATAGCCACATAGGTTGAGGGGGTAGTTATTG 13815 29 100.0 32 ............................. CACGCCAAACAGCGCGGATATAAGCTGGACCG 13754 29 100.0 32 ............................. GGGCGTCAGTAATAGCGAGTTGCATTTCATCA 13693 29 96.6 32 ...............A............. CTACAGCATTCAGCCGAAACGCGACCAGCTAA 13632 29 89.7 0 ..................A.......AT. | A,T [13606,13609] ========== ====== ====== ====== ============================= ================================= ================== 48 29 99.7 32 CCGTTCCCCGCAGGCGCGGGGATTAACCG # Left flank : AACCTGCTGAAACGTATAATTCCATTAACCGAAGAGGTGCTGGCCGCAGGAGAAATTGCGCCTCCACCCCCGCCAGATGATGCTCAGCCGCCAGCGATTCCCGAGCCTGACAGTATTGGCGATACCGGTCACAGGAGTGGTTGAGTATGGCAATGCTGGTTGTTGTTACTGAGGCTATACCTCAACGCTTAAGGGGGCGTTTGGCTATCTGGCTACTAGAGGTTAGGGCTGGTGTTTATATTGGTGATGTTTCAAAGCGTGTGCGAGAAATGGTTTGGCATCAAGTGAACGCTATGGCGGCTGATGGCAACGTGGTCATGAGCTGGGCAACCAATACCGAATCCGGCTTTGACTTTGTTACTTATGGTGCAAACCGCCGAGAGCCTATCGAGCTAGAAGGTATGCGCTTAGTTCGCTTCTTGCCTGAAGGCCCGCCGCAATAAATCCGTAGAATTTTCACTATGAGATTTGCTCTTTAAAAACAAGTGTTTACAATTAGT # Right flank : GTGTCAGATGAAACTTTTGGCGCAGGGATCAGGATTCTATCGCCGGTCGCTCCTGTTTTGCAGGGCGAGTTCTTTGGCCTGTCAGTTGTTCGACTTCGTCTTTAAAGCGATCATTGCCTAGTACCAATCTTTTATTCACTGATTGTCGGATTTTATCGGTCAGCTCAGAATCTACATGATGACGAATTAATTGTGGCTCTAAATAACACTTCCACATACGCGCTCAAAATTGCTCACGTACAATACACTGGAGTCGCTCCTTGCCAAGCCGAAAAATAGAGTTCAATCACAACAGGTCGCTTGTGTTTGGCGCCTAAATGCTATGTTGGATAAAAACTAGCGTTTAACGGGGATTGCGAATAACATAAAGCTGGGTGGTTTCATAGTTTTCGCCTACTGTCCCCGGTTTGCACTGTATTAGGGTGTTATGTGGAATCGGAATATGTTGGGAAATATATTAGGGAGATTAGGCCATGAAAAATACCACCTTACTCATGTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCAGGCGCGGGGATTAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCGTTCCCCGCAGGCGCGGGGATCAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //