Array 1 52-2982 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYDA01000061.1 Flavobacterium psychrophilum strain NO042, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 52 46 89.1 30 TGC.G...G..................................... AACCAAGTTCACAAGTACAAGACAAATTAT T,TC [56,61] 131 46 100.0 30 .............................................. AAAACAGAAGTGCAAATTAGCAAGGAAGTA 207 46 100.0 30 .............................................. TGGTTTGTTCCTTCGGATTTATGAGATGGT 283 46 100.0 30 .............................................. TAAAGAAGGTACTAACGTACCTGTGGGTTT 359 46 100.0 30 .............................................. ATATATTTGTACCATAAACAAACAAACTCA 435 46 100.0 30 .............................................. AAAATAAACCAAGCGTGTCAGACGATTTAG 511 46 100.0 30 .............................................. ATTGAATTAAAAATGCTTCAAGACACCGCT 587 46 100.0 30 .............................................. CCAAATGAATAACCAAACAACGTTGAACCT 663 46 100.0 30 .............................................. CTCACGCCTGAAGTTCTCATAGGCATTAAT 739 46 100.0 30 .............................................. TTACGAGCCAATTAACAGTAAAAAATACTA 815 46 100.0 29 .............................................. CCTCATTCCTGCTTCATCTGGATCCATAC 890 46 100.0 30 .............................................. AATATGCAACTTACGGATTGTTTCTTCGTC 966 46 100.0 30 .............................................. ATTTGAATTATTATTTCAATCTGAAAGAGT 1042 46 100.0 29 .............................................. AATTTTCTAGTTCCGTTAATGCCTCTTTC 1117 46 100.0 30 .............................................. ATAGTTTAAAAAAAATATTTGCAAAACCAA 1193 46 100.0 30 .............................................. GAAGCGGTGGTTATTCCAGAAGTAAAGCCT 1269 46 100.0 30 .............................................. ATGGAGAGAATTACAAACCACACAAACCAA 1345 46 100.0 30 .............................................. CAACGCCAGCAAGCACAACACCAGCACCAC 1421 46 100.0 29 .............................................. ACGTTCAGAATTTCACAACAGAATTGTTG 1496 46 100.0 30 .............................................. TGACAACGGGATAGAAGCAAATGTTTCTAA 1572 46 100.0 30 .............................................. GAACTTCTAAAAAAAGAAACAGAGTACATC 1648 46 100.0 30 .............................................. TCATTAACCGACACCGTTATATTTCCGCCA 1724 46 100.0 30 .............................................. TGTATGCTAAATACCAATCTGAGGGTTACA 1800 46 100.0 30 .............................................. TAGAGGCTAATGCGTGGCATGGTGCTACAG 1876 46 100.0 30 .............................................. TGACTGGGCAAAAGTAGCCGTAATAGACAC 1952 46 100.0 30 .............................................. TGATTTTCTTGAATATAGTATTTAGCACGT 2028 46 100.0 31 .............................................. GGAACCATATTTGTTATTAAATATGTATCAT 2105 46 100.0 30 .............................................. GCTAATATGTGGCTCCTTAATGGCACACGA 2181 46 100.0 30 .............................................. GCAAACCGAGTTAGAAATCGATTCGATGGT 2257 46 100.0 29 .............................................. TTTCATATGAATTGGGGCTGGTCAGGTAG 2332 46 100.0 29 .............................................. TTATTGTCACGCTTCACGTCTAATGTTTC 2407 46 100.0 30 .............................................. CTTCAAAAAAGATTGTACGAAGTACTATTG 2483 46 100.0 29 .............................................. CAAAATGGAATATAGCGTAGCCGAAATCA 2558 46 100.0 30 .............................................. ATTTATGCGTGAAATTAGATTGCCTGTTTT 2634 46 100.0 29 .............................................. ATAAACAAACTTACGATAACAATGGCTAT 2709 46 100.0 30 .............................................. TCAGTTGCTTCAATTGAATTGCCCAGCATT 2785 46 100.0 30 .............................................. CCATTGTCTTGTATCTCCTTATCATATTGC 2861 46 100.0 30 .............................................. AGGAGTCGATTTTATTGTTTTTGTGCCCAC 2937 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 39 46 99.7 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : CAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTTAACTTACACACTTT # Right flank : CATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATCACACCAATTTTGCCATGTTCGGGCAAACTATTTCTTATTCTTTTGGTGTGTACTTCGGCATTTTCTCTGCTGGCACAAAACCGCATATAGATCGAAAATTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTGGGCAGGTCAAAAAATACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //