Array 1 14781-17090 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTDO01000014.1 Acinetobacter rathckeae strain EC24 flattened_line_25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 14781 28 100.0 32 ............................ TGAAGAATGCAAAACCATCTGATAGGTCATGC 14841 28 100.0 32 ............................ GTAAAAGTATTTTTTCTGTACGGCGTTAATAC 14901 28 100.0 32 ............................ ACGCAAATACAATGCGGTTTGCGTTTGACAAT 14961 28 100.0 32 ............................ AAGACTCCAAAAAACATCATCATTATTGATGA 15021 28 100.0 32 ............................ CAGATCGTTACTAAACAAGACTCTTTGCTGAT 15081 28 100.0 32 ............................ TGACTCTGCAACGGCCACAAATGGCGGTACAA 15141 28 100.0 32 ............................ GCTAACACCGCTTGTTAAGTCAATCGCAGTGC 15201 28 100.0 32 ............................ TGCTGATCTTTATTAGATGATTTTTCTTTGGT 15261 28 100.0 32 ............................ TGTAGTCAAGTCAGGCGAACTAGAAACAACCA 15321 28 100.0 32 ............................ AAAAAGATAATGTGAATTTATTTCCCAACATG 15381 28 100.0 32 ............................ TTGTGTGAAGTGTGGTAGTCCTTACTCTCAAG 15441 28 100.0 32 ............................ TAGCGTTGCATTTGCATCTAAGTGCATATCAT 15501 28 100.0 32 ............................ GATGCAGAAAATTGTAAGTACAGCAGAGCAAC 15561 28 100.0 33 ............................ CAGCAAAAAAACCAGCTGTTTCTGCATCTTTAG 15622 28 100.0 32 ............................ TTATGTAATAAGTGACAAATAATAATAAAATA 15682 28 100.0 32 ............................ ATAATCACACGCACGTAATTCACGGTAATCAA 15742 28 100.0 32 ............................ CCAATCATCTTGTAAGTGCAGTCGCCCCATGC 15802 28 100.0 32 ............................ AATGACACACATATAGATACTGCTTTACGCCA 15862 28 100.0 32 ............................ TAGTAGCGAATTTATTTCGTTCAATGTATGAG 15922 28 100.0 32 ............................ CGCACAAGTGAACATCACGGGTACATCGAGTA 15982 28 100.0 32 ............................ AGATGGCATTTCCTGCAAAAATTGCACGATTA 16042 28 100.0 32 ............................ ACACCAAGCAACAGTATCACCCCTGATTTTCC 16102 28 100.0 32 ............................ TTGTCAAAACCAAAGATAGGCGTACCATCAGC 16162 28 100.0 32 ............................ TCCTTAGCCAAAAAACCTTTTTCCCTCAATTC 16222 28 100.0 32 ............................ AGAGTTGAATACTGGTTATAAAGCTTATGCAG 16282 28 100.0 32 ............................ GTCAGCTCTTTCTGCCATTTTTGTATATTCTG 16342 28 100.0 32 ............................ AAAAACCGTAAGTCGGCTTACTGTCTGCAATA 16402 28 100.0 32 ............................ TCTCCGCTGTGAGTGCTTTTTTTGCATAGTCT 16462 28 100.0 32 ............................ TAGAAAGCGTGGTAGTAGCTGGTCTATCTCTG 16522 28 100.0 32 ............................ CTGCCTGAGTCATAGCACTAACGCCGTGTGAA 16582 28 100.0 32 ............................ CAAAAGAAAGCCCCGCAGAGTGCAGGGCTAGA 16642 28 100.0 32 ............................ TGTACCACTTTGCCCTAAAATTAGTGTTGCTA 16702 28 100.0 33 ............................ TGCCTATTTTCATACATGGGGCTGCGTTTACTT 16763 28 100.0 32 ............................ ATGCCATTTACCCTCTACCATCAGTTTAATTT 16823 28 100.0 32 ............................ TTAAAATTGCAGATCAGGTATTAAATCCAAAA 16883 28 100.0 32 ............................ CAAGGCTTAAAGCGTTGTTTGTAACAGTCTTT 16943 28 100.0 32 ............................ CCTCACGCATCAATTGCATTTTTAAGTCATGT 17003 28 100.0 32 ............................ CTGTGTCTTTTTACTTAATTGATTCGTAGCTG 17063 28 96.4 0 ...........................A | ========== ====== ====== ====== ============================ ================================= ================== 39 28 99.9 32 GTTACCCATCGCATAGATGGTTTAGAAG # Left flank : GGCGTTGGGCAAAAGCACTCTATAAAACTCTTGCGAGAGGTTTTAATTTTGAGTTTAGTCGTGATGAAGGAAAACAGTCGCATGACTCTATACAAGATATTGCCAACAACTACCTCGATCACGGCAACTATATTGCTTATGGTTATGCGGCTGTTACCCTACACGGCATGGGTATTAGCTTTGCACTTCCTATGCTTCATGGTAAAACACGTCGTGGCGGTTTAGTGTTTGATATTGCAGACTTAGTGAAAGATGCTTTAGTGATGCCACAAGCATTTGTCTCTGCACAATTAGGGCAGAATCAAAAAGAATTTCGTATGCAACTGATTGAAACCTGCCAAGATAACGATGTTTTAGACTATATGTTTGGCTTCATTTCAGAGCTATGTAATAAAGTTAAGTAATTTCAACAAGTTACTAGAAAGCACTAAGATTGATGTATTTTTATTCTTTAATAGCTTATATTATTGATTCCTCTGTTTTTTATTTAAAAAAATAGA # Right flank : ACTCTCATCTCTCCAACAGCTAAAGATAAAGTACGTAATGATAGGGATTAATAAAAAAAGGCACCCTAAGGTGCCTTTTTTATAACAATGCTATAACTTATAGTTCTTCATTTAGAGCTTGACTAAATGCTTGATCTACTTCGCTAAAGTCATTATGTAACTCAACTTCTGCCGCTTCAGATTCTTGACGACGACGTTCTAAGTGGTACGCAAGACCTGTACCTGCAGGAATCAAACGACCTACAACTACGTTTTCTTTCAGACCACGTAAGTCATCTTCTTTACCAGTTACAGCCGCTTCCGTTAACACACGTGTTGTTTCTTGGAACGATGCTGCAGAGATAAATGAATCTGTTGAAAGTGATGCTTTCGTAATACCCATGAGCTGACGCTCAAACTTCGCAGGGAACTTGTCTTGTGCCAACGCTGCTTGGTTTTCTTGAACCATGCGAATGTAGTCAACTTGTTCACCTTTAATAAAGCTTGTATCACCACCATCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACCCATCGCATAGATGGTTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTTGCCATCGCATAGATGGTTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.20,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //