Array 1 135112-132156 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP071097.1 Fusobacterium nucleatum subsp. animalis strain THCT7A2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =============================================== ================== 135111 37 100.0 41 ..................................... TCTTTGCTTTTTAAAATTAGGTACAGTCTTAAATAATTCTT 135033 37 100.0 39 ..................................... GATGTATATAATTTTTACTTGGATATATCTGTTAATATC 134957 37 100.0 40 ..................................... GATAAAGGTGGATAAAAGATGGTAGATGCTCCACCTTTTA 134880 37 100.0 38 ..................................... TATTGATTTCTATATTTTGCAAGTAAAGATATTTTTGT 134805 37 100.0 37 ..................................... TCTAAAATTTTTAACCTATTAAATAATACTTATATAT 134731 37 100.0 35 ..................................... TTAATAATTATTTCTTGGCTTGTGCAACCCTTGAA 134659 37 100.0 36 ..................................... GTCAATTAGACAACCGATGTGGAGTAAATCCCTTTA 134586 37 100.0 35 ..................................... TTTTATGTGTTAGCCAAGTACCATTTGTTTGGAAA 134514 37 100.0 38 ..................................... CTAGAACGAAAGTATCTCTGCAATATATTATGATCTAT 134439 37 100.0 37 ..................................... TATCTAATATTTCATCTGTTAGAGTTCTACAAAATTC 134365 37 100.0 37 ..................................... TGCTAAGGCAGTAAACTATACTGGGACAATGACACCT 134291 37 100.0 37 ..................................... AATCCATTATTAAATGATGTATTAGATACATTGGGCA 134217 37 100.0 36 ..................................... AAAAAAGAAAAATCAGAAATTCAAAAGAATAATAAA 134144 37 100.0 37 ..................................... TTTACCAGTGAATGGAGTAAAAAAGCCGTTGATCATA 134070 37 100.0 35 ..................................... ATATATAGCGATCTGATCCCTACTTCTACCTATCA 133998 37 100.0 38 ..................................... GAAGAATAAGATTATGAGACAAGTTTGGGGTAAAGTGC 133923 37 100.0 39 ..................................... GGTTCTCCCTTATACCCTTTATTTACTGCTTCCTGTAAA 133847 37 100.0 36 ..................................... ATTTTTCTGTTAATGCTGGAACGATAGAAATTATTA 133774 37 100.0 36 ..................................... GGGAGTTGTTGGATAATGGTAGTTATTGTTAAGATG 133701 37 100.0 36 ..................................... TCAGATACTACATCAGAAGAATAATTGCAAGCTTTA 133628 37 100.0 38 ..................................... TTTTCTATTATTGCTTTTTTAAGTAATTTGATTATTAA 133553 37 100.0 35 ..................................... TTTAAACTACTCACTTTTTTATTTTTGGTTTTTTG 133481 37 100.0 35 ..................................... TAAAACTTGCATTCTGAACATCTTAAAAACTTTTT 133409 37 100.0 41 ..................................... CTATTGCACCAGATACTACACCATCAACGTTACTTACCATT 133331 37 100.0 38 ..................................... CAGTCCCAGAAGAAACTAATCGAAGCTTTTTCTGAACC 133256 37 100.0 40 ..................................... ACTAATCGAAGCTTTTTCTGAACCAAAAGCAAAAGATTTT 133179 37 100.0 36 ..................................... CTATGGTTGGACAAGTTGGACAATTACTAACTTATG 133106 37 100.0 38 ..................................... CCCTGCATTCTAAACATCTTAAAAACCTTCTCAACAGA 133031 37 100.0 39 ..................................... TGCGCTTATTCAGATGAAGTTGTATCTGAAGAAGTTGCA 132955 37 100.0 36 ..................................... CTATGGTTGGACAAGTTGGACAATTACTAACTTATG 132882 37 100.0 41 ..................................... TAACATCAGCTTTTAAGCTAATTACATTTTTAGAATTAAAT 132804 37 100.0 38 ..................................... AGCTTTCCATTGTTCCTCTAATACTGTGTCTATTTTAA 132729 37 100.0 41 ..................................... CAAGGAATTAATTAAATATACATTACTGGGTTCATAATTAT 132651 37 100.0 37 ..................................... AAAATCTTAATTCAATGAAACAAATTGAAATAGATAA 132577 37 100.0 47 ..................................... AAAGAATGCTATAAATGAAAATTATCATTCTTTATTAAATTATTATA 132493 37 100.0 37 ..................................... TTCAGATATAACGTGCTTATGTAAGTCCCTGTGAACT 132419 37 100.0 37 ..................................... AAGTATAAGTCAAGTAGCTGTCTAATAAGCATTCTCT 132345 37 100.0 43 ..................................... CTGGGTCATTAGCTTTAAGTCCGTCTTTATTTTCTTCTATAAG 132265 37 100.0 36 ..................................... GAGGACCAAATTATATTTTATTTTCTTTCTATATAA 132192 37 94.6 0 ...................................CT | ========== ====== ====== ====== ===================================== =============================================== ================== 40 37 99.9 38 ATATTGAAGGTAATCCATTTATAATAAGGTTTAAAAC # Left flank : GGAGAAAGTATAATACTTTTTTCCAATGTACTAATAAAAAAAGTATTTTTTTTCCTTCCAATGGCTGTTCCTTGTGTTGAAATATATAAATCCATAGATATTCCCCCTCTATGTAAAAAATAAATAATAAAAATTAGAAATTATCATATATTATATATTAACATATATAATAAAAATAGAATAGAAAAAGTTAAAAAAAGAGAAATTTATTAAAAAGATAAAAATATATTTGCTTTTTTATAAATACATGATAAAATCAAAATAAGGATAAAGTAAAATTGTAGAAATAAGTATATATGGTTAATTATTTAACATTTTATTTTTTAATTTGTATTAAAAAATAAAATGCTTATTATTTTTTTAAAGATTAAAAAGTTATACTAGAATTTTAATATAAAAAAAGTGAAAATCTTTGAGGCGTGGAAAAATGATTAAATTTTGCTACCATATAAAAATTAATTCTTCCTATGATAAATACAATATCTATACCTTTGATTAGG # Right flank : TAAAAATTAATGTTACTCACGACTAAAGTCGAGAGCTTCATAAGATAGCTGAAAAAGTAAGTTATCTTCTAAGAAGTTTGATTCTGAAATCCTTATTCTTTTTGGCTAGTCCACGATAGCCACTACTAGATAAGACATTGTGTCTATACTGCTACTTTTTATCTGTATATTATATTTAAAAGAACAACTATACAGAACAGTGAGTATTTTACAAGGCTACTGTTTACTAGCCTTAACCTTATATATTCAATTTCTAATGTTCTAAGTATATTATTCACTAAAATTTGTAATTTTACTAATTTTAGTGCAACATTTTTCAATGTTGGTGTTATTCATACTCTACGAGTACAGGTCTTATACTTAAAAGTACGAGTGTTCTAACACACTTAATAAATAAGAGTTTTTCTATTATTTTTTTGCAAAAAATTGAAATATTGTTATATAATAAGGTATAAAGTTTTTAGGCATTTGTAAAAGTCTAAAAATATAAAATTATACTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATATTGAAGGTAATCCATTTATAATAAGGTTTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:78.38%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 527186-520755 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP071097.1 Fusobacterium nucleatum subsp. animalis strain THCT7A2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 527185 30 100.0 36 .............................. ACTTGGGAAAGTAAAAGAAGAGTACCAGGAACTATT 527119 30 100.0 36 .............................. AGATGAGGATAAAATTTATGGGAATACAAAAATTCA 527053 30 100.0 35 .............................. AGAGGTTAATTATGTTAATGAAGATATGTGGTAAG 526988 30 100.0 36 .............................. TAGACTAGTGCATCCACTAGTCTATTTTTTAAATCT 526922 30 100.0 35 .............................. CTGGTGTATTTTGACTATGATAAAAATGATAAAGA 526857 30 100.0 36 .............................. ACAAAATTTAGTCTACACTTGGAAATTAAGAATTTA 526791 30 100.0 37 .............................. TAATTGACTTTTATGTCTATATTATTTACAAGTTGCC 526724 30 100.0 36 .............................. TATCCTATTTCAGTACCTCTATGTCCTTTATTTGAC 526658 30 100.0 36 .............................. AACATCCCATTATAAGAATTTATTTCAGAAACCATA 526592 30 100.0 37 .............................. AATATTAGTTTGAATGTTACATTGATAGTTTTATAAA 526525 30 100.0 35 .............................. AAAAATGGGAATATAATAAAAGTTGGAAAAGACTA 526460 30 100.0 35 .............................. TAATCCTTCCTCCTATAATTTTTAATTTTTATGTT 526395 30 100.0 36 .............................. AGGAGAAGCATTAAAGAGAAAAGTAGCTACTTTAGA 526329 30 100.0 35 .............................. TTTGCTCCAACTAATTTTAAAGTATTTTTTCCTAA 526264 30 100.0 36 .............................. TTAAAACCAATGTTTCTTAATGGTTGAAAAGATAAA 526198 30 100.0 36 .............................. AAATAATTTCCACTTTCAAATTTCTCTTTTCTTTCA 526132 30 100.0 35 .............................. CTTCCTCTAAGTTTTTATGTAACAAACTTGTTACA 526067 30 100.0 36 .............................. CTTACGAATACATTATATAACGAAATATTCTTACCA 526001 30 100.0 36 .............................. AGAAAAATTAGATGCTGGTAATAATGATGAAGTTTT 525935 30 100.0 36 .............................. ATATCCTACACCTTATCTGATTGTTTTTGTATACAA 525869 30 100.0 37 .............................. GGAGTTAAAAGCCTTCTAGCTTGATTAGATTCACTAA 525802 30 100.0 38 .............................. TCAAATATACTCTTGGAATATAGTGTTGTTTCTCTTTT 525734 30 100.0 36 .............................. ACTTCCATTCTTAACTGTTCTATTTGCATTTTTGTT 525668 30 100.0 37 .............................. TTTAAAAAACTGAAAACTTTTGAACTTGAAACAACAT 525601 30 100.0 36 .............................. TTTAACATTTTTAAATTTTCTTCCAATGATAATTCG 525535 30 100.0 36 .............................. TCATCAAATAAAACTAGATTATTTCCATTTTTTAGA 525469 30 100.0 36 .............................. GCCAAAGTCTTAAAACTCAAAGAGAAGAAGCTCTAA 525403 30 100.0 35 .............................. AAAGAAAAAGAATGGGGAGAAGGTGCTATATATAA 525338 30 100.0 36 .............................. TATTTATCAAAGAGTTTATATTTATTTCCATCATAA 525272 30 100.0 36 .............................. TTTTTTCTCCTCTCAGCCGTTTTTTACGGCTTTTTT 525206 30 100.0 37 .............................. AACAATATGTATTATCCTTGTTTCTCTCCCCTCTATC 525139 30 100.0 36 .............................. TATATTAAATAAAATGTCAATAAAAAATTTATAATA 525073 30 100.0 36 .............................. ATTTTAAACATTTTTAATTTTAGAATAGATTGATTG 525007 30 100.0 35 .............................. TCTACTCTATAAGAAGATAATTTATATCTTTTTAT 524942 30 100.0 36 .............................. AAAATAAAATTAGCTGTTTTTTCAGTATTTAACACT 524876 30 100.0 36 .............................. TATAAATGAATTAATAAATAGTAATAGAGATAAATT 524810 30 100.0 37 .............................. GTGTGATAATATGCCTATAATAGAGAAGAATAAACAA 524743 30 100.0 36 .............................. AGCTAGTCTTTTTTTTATTGTAGCAGGAAAATTAAA 524677 30 100.0 36 .............................. TTTTAATAGAGAAACTAACAGTTATTTTAAACAAGA 524611 30 100.0 37 .............................. TTAAATATTATAGTCATAATTTTATTCCTCAAACAAA 524544 30 100.0 37 .............................. TATTAGATATAATAGAGTTAGACAAGAGGGTAACGTA 524477 30 100.0 35 .............................. AGTCAACACAATTGAGTTTACATTTAGAAGTTAAA 524412 30 100.0 36 .............................. CGTCAAATCTTTTATATATAAAAACTTTAAAATTTA 524346 30 100.0 36 .............................. GCCAAATTAATTAAGTCTTGTTTTTTCATATTTCTC 524280 30 100.0 38 .............................. ATATGTATTTTTACTCAAAAAAGTATTGACATTTTATA 524212 30 100.0 36 .............................. ATACAGAGGTTATGAAAGAGTAAACTGATGTATTTA 524146 30 100.0 36 .............................. GATGTTTATTTTATTGTCATTCTATGATTAGAGATG 524080 30 100.0 36 .............................. TTAAACAAGTTCTATCAGATAACTTATATAATTTTA 524014 30 100.0 38 .............................. ATATGTATTTTTACTCAAAAAAGTATTGACATTTTATA 523946 30 100.0 36 .............................. ATACAGAGGTTATGAAAGAGTAAACTGATGTATTTA 523880 30 100.0 36 .............................. GATGTTTATTTTATTGTCATTCTATGATTAGAGATG 523814 30 100.0 36 .............................. TTAAACAAGTTCTATCAGATAACTTATATAATTTTA 523748 30 100.0 34 .............................. TTCTTTTAATCTTCTCAACAACAACATTTATAAA 523684 30 100.0 39 .............................. ATCTCCTTTTTATTTTAGTCTTCACCTTTTCACTATTTT 523615 30 100.0 36 .............................. TAAAATATAGTATAATTAGTTAGCTTAAAAATTATG 523549 30 100.0 36 .............................. ACTTTGTAATCATTACAAATATTATTAATATTTCCA 523483 30 100.0 36 .............................. TAATATTGTTCAAGTAAAACTTCTTCAAATGCTTTT 523417 30 100.0 37 .............................. ATATATGGTGTATGAGTGTCTTTAAACTCCTTGCTTC 523350 30 100.0 35 .............................. GCATCTTGCAATGTCAATCCAAAAGCACTTATGTT 523285 30 100.0 35 .............................. ATGAAGAAGTGGAGATGTTATCGGCACTTGTTAAA 523220 30 100.0 36 .............................. TCTCCAATATTGGTTATGATATCTCCTAGATACTCA 523154 30 100.0 35 .............................. CTAGCATTGGAGTTATATATCAAACAAGGTAAAGA 523089 30 100.0 37 .............................. AATTTTCTAAAACTTTTAATTGCATGATAAACTTCCT 523022 30 100.0 37 .............................. TTTAATAATCTCCTTTTTAATTTGTTTATAGCCACCA 522955 30 100.0 37 .............................. CTGATTTATTAATAAAAGAAAAATTGAAAGAGTTGGA 522888 30 100.0 36 .............................. AAGTCATCAAATCTTTTCATATACTCGTCAAATTTA 522822 30 100.0 36 .............................. GTTTTGATATGCAAATGAAAGGAGTGTGATTTTTTA 522756 30 100.0 36 .............................. TATATTAAAGCACCTAATGCTTTTGAACTAGGAAAA 522690 30 100.0 36 .............................. AATGTGCAGGTTTACTTATATAAATAAAATTCTTAA 522624 30 100.0 37 .............................. AACAAGAGAACTTGGAAGAAGTACAAGATTTACAGCA 522557 30 100.0 36 .............................. ATTAAACATCCCTTTGACATTTTTATTTTTTCAAAT 522491 30 100.0 36 .............................. AAAGTAATGCCTTTTTCTTTTTTCTTGTGTATCTTA 522425 30 100.0 35 .............................. CATTGTCCTTTTAGATTAGCATGTACAGCAACACC 522360 30 100.0 36 .............................. ATTTAGCCTGGTTAAAATATGCTTCTTTTAATTCAA 522294 30 100.0 36 .............................. AAAGGAATTGCACTCAACATCAAGAATAGTAACTGA 522228 30 100.0 36 .............................. TTTATTTTTATTTCCCTTTTCTCTGTTTTCTTTGCT 522162 30 100.0 35 .............................. TTTTTAAGATTATTTAAAAGATTTTTTAATTCTTC 522097 30 100.0 36 .............................. AATGAAGAATATTTTTTACCAGAAGTTTTAGCAGTA 522031 30 100.0 35 .............................. CAATAGCAATGCTTTTATGGAAGTGATGAGATGAA 521966 30 100.0 36 .............................. AATCCATTGTTTCTATATCTTTTTCAGCCTGAGCAT 521900 30 100.0 35 .............................. TAAAAGCACCAGTAATAAAATCTGTAACTTTATTA 521835 30 100.0 36 .............................. AGGGCAAAACTGTGAAGATTTTAGAATGTACCCAAT 521769 30 100.0 35 .............................. AAAATGGGCTATTGAAAATAATGCGGATGCTTTCA 521704 30 100.0 36 .............................. AAAGAAAAGGATAAAGATTTAGAAGTAATTTATAAT 521638 30 100.0 35 .............................. AATTCAAAGTAGAATGATTGAGGACTATGCTGATA 521573 30 100.0 36 .............................. ATTTCATTTTCTAAGTTGTTTAGAGCTTCCACAAAC 521507 30 100.0 35 .............................. ATATTTGATGATATAGATGATGTTATTGATAAAGG 521442 30 100.0 34 .............................. GATACTAAGAAAGATATTTCTTTTTCTAATTCTT 521378 30 100.0 36 .............................. TATGACTGTTCTGAAGATTTAAAAAGAATAAAAGAA 521312 30 100.0 36 .............................. ATTGATTCAAGACTTCTTTATTGTCTTCAACTTTTA 521246 30 96.7 36 ............A................. ATTTCTTGTGTTACTTTGCTATCTTTTAAAATTCCA 521180 30 100.0 37 .............................. GGAAATATACTTGTTACAGTTCCATATCTAATCATTT 521113 30 100.0 34 .............................. TAAAATATTGTAATTTCTGTTCTTCTTGCATTTT 521049 30 100.0 38 .............................. TTATGAATTAATTGACAATTTAATTAATGAATATAGAA 520981 30 100.0 36 .............................. CCAAGTATGGAGAAGATATGCAAATCCAGTTTGGAT 520915 30 100.0 35 .............................. TTATATATCTTTACAAGCTTTTCTCTTCTATTTGG 520850 30 96.7 36 ........T..................... CTTATAGCATTATATGAAACCCTATAATTTTCTTTA 520784 30 76.7 0 ........T.....AA....A.....TTG. | ========== ====== ====== ====== ============================== ======================================= ================== 98 30 99.7 36 ATGAACTAAAAACTTGAAAAGTTTTGAAAT # Left flank : ATTTTCTTTAAAAAATTCATATTAATTTAGAAGATGAGAAAAATTGAAAAATATAAACTATAATTATGCTTGGGTATTTTATGATGTTTCAGAAAAGAGAGTAAATAAAGTTTTTAAAATATGCAAAAAATATTTATCTCATTTTCAAAAATCTGTTTTTCGTGGGGATATAACTCCCTCTAAATTAATTAGTTTAAGAAGTGAATTAAAAAGCATAATAGTTGAAAATGAAGATTTTGTTTGTATTTTAAAATCAATAAGTCCTGATGTTTTTGGAGAAGAAACTTTGGGAAATCCAACTCCAAATGGAGAAAATATATTTCTATAATTTAAAAATTTTCCCAAGCAATATTCTAAAAAACTATTTAAACTTTCCAAAATATGATTGTTTTAGAAAAATTAAGTAAAAAATAGAATTGCTTGGGAAAAACATATAAAAAATACTTGTAATATTGAAAAAAATAAGGTATTATAAATTTACAAAGCTTGAAAAAATAGAG # Right flank : TAAAAGGTATTTAGGAAAATATTAGGTAGATACAAAACAAAATTAAGGTAAATAATTTATGAATTGGTAAAAAAATAAAGAAAAACTGGTAAATTGAATGTATCAATTTTTCCTATGAAGAAGTAGTAAAAATGGAAAAATAACCAAACTCATTTAATTGGAGTCAAATATTATATAACATACTAGTATAGAAATAAAATATGTTAGAAAGAAAAGAATTATAGATTTGATAAAACAATTAAAAATTGTTGAAACAAGGAGGAAATTATGAAAAAATTTTCTATTCATGGAACAGAAGAGGGAAATACTACCTCAATTAAATTAGATGAAATTGCTATTTTAGCAGATCCAGATACCCTTTTAAAAATAGGGGAATTTATAATAAAAACTGCACATGTGATGAAAGGTTATGAGGTAGATTATAGTCAACTCCAAGATGAAGTTTCAGATTTTGATTATAAAAATAATACAGATATTATTATATATAATCAAGATTATGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGAACTAAAAACTTGAAAAGTTTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.00,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //