Array 1 1068-3596 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADCNY010000029.1 Klebsiella pneumoniae strain KCJ3K687 NODE_29_length_79202_cov_7.149478, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1068 29 100.0 33 ............................. GCCCGCGCGAACCTGGGGCTGGGAGATTCAGCG 1130 29 100.0 33 ............................. TTGGCGGTCGACGGTGGCGAACTGCCTGATCAG 1192 29 100.0 32 ............................. GGGGGGAAATCAAGGTCAAAGTTGAGCTGGAT 1253 29 100.0 32 ............................. CCTCGATCATTCTTGCCAGTTGGGAGTCGGAC 1314 29 100.0 32 ............................. CACCTCGCCTATAAATCGTACCAGCCTGACAG 1375 29 100.0 32 ............................. TCGTAGCTAATAAATTCGTTGCTCATTTGAAA 1436 29 100.0 32 ............................. GCATCGCTCGCCTCGTTCGGTGCTAACGCTGG 1497 29 100.0 32 ............................. CGGCTGCGCTGTTGCACATAGCCGCTCAACCT 1558 29 100.0 32 ............................. CGGCCGCGTTCTCCCCTGTGGGAGGGGTGGGG 1619 29 100.0 32 ............................. GAATTTATTGGGAGGTGATAGCTCTGGCAGGT 1680 29 100.0 32 ............................. GGTATGCAGGGCACACGCCAAAATAATTTTGC 1741 29 100.0 32 ............................. ATACGCAGTCATTAATCGCGGGTGTTACGCAA 1802 29 100.0 32 ............................. CCTGCTGTCATTTCCTTCGGCACTACCGGCGC 1863 29 100.0 32 ............................. TTACACAAGAGAAGCACTGACAACCATTCACA 1924 29 100.0 32 ............................. CCTAAATTGCCAATTTTCCTTGAGCGCTGGTA 1985 29 100.0 32 ............................. AATACCGGCGGCAGGGATTTACGCCCGAGCAG 2046 29 100.0 32 ............................. CGCACGGTGCATTCACGCCCGCGCGCCTGTTT 2107 29 100.0 32 ............................. GTGACGCGCTGCAGTTTGCCAAAACCCTGCCA 2168 29 100.0 32 ............................. ATTTTGCGTACGCTCTCCCACAGCTGATCGTG 2229 29 100.0 32 ............................. TTTCCGGCAGCGTAGCCAACCCGGCCAACCGT 2290 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 2351 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 2412 29 96.6 32 A............................ GGTTTATAGAGGCTGAGGTATTCACAATGCGC 2473 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 2534 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTACACCTGGAA 2595 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 2656 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 2717 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 2778 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 2839 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 2900 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 2961 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 3022 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 3083 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 3144 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 3205 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 3266 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 3327 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 3388 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 3449 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 3510 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 3568 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 42 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGTG # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTCTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCTTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //