Array 1 61244-60339 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBEL010000013.1 Filibacter limicola strain DSM 13886 Ga0244518_13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 61243 32 100.0 35 ................................ TGTCATTGGCGATTACAAGGAGGAAGCGGGCGCAT 61176 32 100.0 33 ................................ ATGGATTTCAGCTTTAGAGGATCATCAACGCCG 61111 32 100.0 33 ................................ TCTATGACTCTCGTGCAGAAGTTGAGGATGAAA 61046 32 100.0 36 ................................ TTAAGTTCGAGCGCCTAGTATACATGGCGTTAAACC 60978 32 100.0 36 ................................ TTTCCGGCGATAATCGTACCTTTTAACTCGTTGCTC 60910 32 100.0 35 ................................ TGAACTCCGATTCGACGCGAGGGTCTTTGCTTATG 60843 32 100.0 35 ................................ GTTATGATCAACTCATCAAACTTAAAACTATCGTC 60776 32 100.0 35 ................................ CTCCTAATCCATAATCCAGCCTTTTCAACGAGCCA 60709 32 100.0 34 ................................ GACATCGACGATATCCCACTCGTAAATCTCACGA 60643 32 100.0 38 ................................ AAGTTTCTCCCTTACATACTTCAATGTATTTAACTCCG 60573 32 100.0 36 ................................ ATTCTATCTTCATGTTCTTTAATAAGTCTAATAGAC 60505 32 100.0 35 ................................ TAAATTCCATACTCCCACTCGTCAGATTGAGTCGT 60438 32 100.0 36 ................................ AGATTTAGTTGATCCGTTGCATTTTATAGTCGGTAT 60370 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 14 32 100.0 35 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : CCTCACCCGAATCCAACAACTAAAAATAGAATAAGTACAAAGATATACATTTTATGTAAGGTGAATAGTAACCAAGGGAGAAGTCTGCTCAAAATAGCGATATCCTACGCTGCAAAATGAAAAAAGCATTTATGGGACCACAAAAGATGATAGATTTACAAAATCAAAATACGTGATCATGAATTCTAGCTAAATTCACGATTTCTCGTACATGCGTGAATAATTCAGGTATAATCTAGTGGGACTTAAACCCTTTAAAGTATTGGATTTTGAATTCTCATTTGTCATGCAAATTCGCTCTGTCCCGAGTCCTGTGGTAGCGAATTAGTTAAGTGCGAGTGTGAAGCTCTCATACTTTCTCTAGGGGATTCGCACCAATAAATAAGGGTTTTAGGAGTTAAAACTAATGCAGTGAAGTATTTATATTCATTTTATGGGTGAAAAATAGATATTAATTACATAAAACACCTTTTTCTGGGGAGTATTTGTTCTTTTTTGCT # Right flank : ACAAATGCAGAACGTACAATGCACAACGGTGAAGTCGCACTCTACATGAGTGCGACTCTTGTTTTTTTTAGATGAGTAGATCATCTAAGATTGGCGAAAAAATTTTAATGCTGCAGTTACGCTGCATTGATAGCACGTACGACGATTGTCTTCTTACGTTATATGAGGCTAGCCGTAAGTTCCCAAGAGGTAGAAGGCAATCGATAATTGGCAATATTTTCTATGTGTGTTAGGATAAGTAGAGGATTTTCGGTTTACCGAAGCTCTTTTGACTTTTCTGGAATTGATGGGAACAATATTGGTGGAAGAATCATTTTAATAGAGGGTCAAATCAAACTGTTATTGGAAAGTATTCCTTGTGATTTACCAGCTTTTTTGAGAAATCCATTCCTTTTATCTGATGCTTCTTGACAATTGAACTAATGAAAGCCCTTTCATAATATAGGGTAAAAGGACTTTCATGTCTGGGATTTGAGTGGAAAACATACAACAACAAGGAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 114877-111032 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBEL010000001.1 Filibacter limicola strain DSM 13886 Ga0244518_01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 114876 32 100.0 34 ................................ ACCAACCGCCAAGCTGAAAAATGAGCTGTTTAAA 114810 32 100.0 35 ................................ GCGAGTGTAGAAGGGGATATTCCTAATACTTCGCG 114743 32 100.0 34 ................................ TGACCAAGCCGTGATGACGCGTTGATTCTCTTCA 114677 32 100.0 35 ................................ ACACGCCCACCCATCTTTATCGCGATCCATTTTAC 114610 32 100.0 36 ................................ TATCACTCCTTGTTAAGTTAAATTGATGACTGCTCC 114542 32 100.0 34 ................................ CTTCTATTAAAGAGCGATAGTTTCATAGGCGCCT 114476 32 100.0 35 ................................ CTTAACACGCTTTGGGCTAGCTGCGATGGACGGCG 114409 32 100.0 36 ................................ AGTCCTAGACTACCCTTACGCAACGCATGCTGAATC 114341 32 100.0 36 ................................ AAGTTCCGCCGATGGAGGGCAAGCCATCCACCTGGA 114273 32 100.0 37 ................................ TACTTTGTTGTTTTTACACTGCCACTCGTCATTAGCA 114204 32 100.0 35 ................................ AGGTGCACACACTGTAAGCATGAGTACGTAGCTTA 114137 32 100.0 35 ................................ CAAGCAGGAGTATGTAAAGATCACGAAAGAGCTAA 114070 32 100.0 35 ................................ CCTAGACGGAACTCTCTGTGGAACGAATCATAAGT 114003 32 100.0 34 ................................ TAAACGGCGTTGAGTATCATCTTTCATACCTTTT 113937 32 100.0 35 ................................ ATCAAATCGCCAAAATGACTTGCCGCACTAACTAT 113870 32 100.0 37 ................................ CAGGCGTCGTGTAGTTGTACATATACATGTAAAACAA 113801 32 100.0 34 ................................ TGATAAGCCTTGGTCGCATTGAAATACTTAATGT 113735 32 100.0 33 ................................ TCGTAATGTCATTCCGCTAGACTCATATTCTTT 113670 32 100.0 36 ................................ ATCACCATCCACAACCCTAGTCGTCGTATATTCGCC 113602 32 100.0 35 ................................ GTCCTCATGACAGCACTCGTCAACAAACGCTTTGC 113535 32 100.0 35 ................................ CGGATATAGAGTTTTTAATGGGATTATTTTTCCGA 113468 32 100.0 36 ................................ TCTTTGTTGTATCGCTCGATAACTTTTACTGCAGGT 113400 32 100.0 36 ................................ TTAACGACGTATTCATCTGATTCACGCAAATGCCAC 113332 32 100.0 34 ................................ AAGGCATAATAAAAAGCCACACCCGTAATGGATG 113266 32 100.0 35 ................................ ATTTGCAAGTTGGATGATGAAGATGAAGTTGACGA 113199 32 100.0 36 ................................ ACCCCTTTACCATTGCACCTGGTCGGCATAGACTTT 113131 32 100.0 33 ................................ ATGAACGCCTAACCATCCCGCAATTTGTCGGTA 113066 32 100.0 37 ................................ AGCGCGATGCGACTCAAATTGTTTCAGCTGATATTAG 112997 32 100.0 35 ................................ GGAAACGTGTTAAAAGGTGTGTTCAAATATGCCAA 112930 32 100.0 36 ................................ GTCGGCGACGTACTGATTGATATCGTTGATCGGGAA 112862 32 100.0 35 ................................ AATTAGCGTCCGTCTGCAAACGGGCGTTTTTATTT 112795 32 100.0 34 ................................ ACTTGCGGCTGTCCAGCTGCTACACGTATGCGAG 112729 32 100.0 33 ................................ GAATCGTTGAATCTTTCACGCCATGTTTTGTTG 112664 32 100.0 36 ................................ TGTGAGGACTGCGCGAAAGAACTTGCTGCAAGGTTG 112596 32 100.0 38 ................................ CGGAAGGCACGCCTCCAGTGGTAGTGCTTAAAGGTGTA 112526 32 100.0 36 ................................ AGTTGGAAACACGTATTTTAGAACTTGAGGGTGTGC 112458 32 100.0 33 ................................ AGTTGCAGGAGCGTATTCGGTCGAGGGGCAATA 112393 32 100.0 34 ................................ CTTGTCCCTCATACGGGGGTCACAGAGGAATAAG 112327 32 100.0 34 ................................ CGACTTTGCGGCAGGACTGGACACTCAAATCTTT 112261 32 100.0 34 ................................ ACAATGGACCAAATCGTACAAGCCTATTTTGATA 112195 32 100.0 35 ................................ TGATCACCTCGCAATGAGAAAACGACAGGAAATGC 112128 32 100.0 35 ................................ AGCGTCATCAATGAACCGCCTGACGTCTTTATCTC 112061 32 100.0 35 ................................ AGCTTTTAAATGTGAAGCCCCTGGATACATAAGCG 111994 32 100.0 34 ................................ GGTTGTCGAAACCTTTCGAGGTCAAGGTATTGTG 111928 32 100.0 35 ................................ AAGATTTTTCTTGCGTATTTCCTCAGTTGTTTGAT 111861 32 100.0 34 ................................ GGTCCAGTTCGCGATTGCGTTCCGATTAATCCGG 111795 32 100.0 36 ................................ CTGTCTATGGTTTTTTGGTCAAAGCGGGCAGTAGAA 111727 32 100.0 36 ................................ TCCGCCTGTTTAAGAAGCGTGTTGACCTTCGTCGTC 111659 32 100.0 35 ................................ GACAAAAAGTATCCGAGCAATACACCTTGGTTTGT 111592 32 100.0 34 ................................ CGAATCCTTTAAACATCGAAGTGATTTTTGTGAA 111526 32 100.0 33 ................................ AACATGGGCGGCTTGTTGCGCGGAGATACTGCT 111461 32 100.0 34 ................................ GAAAGAAATCATGATTGATGTGAATCAATTTAGT 111395 32 100.0 35 ................................ TACAACTACTTAATATAACAGAAAGATTACCAATG 111328 32 96.9 34 ...A............................ AACGGGATGAAATTGCCGAAAGCGGCTCCGTTCA 111262 32 100.0 35 ................................ TCAGGTGGATTAGATATTAACTCAGCTTCTTTTTC 111195 32 100.0 34 ................................ CGTTATATCACTTAGGTGGTATCGTTGTATTTGG 111129 32 87.5 34 ..........ATA......T............ CGTCACTTTTGACCTTGTCGCTGATTGGGAAGAT 111063 32 75.0 0 A.........ATA.......AG.....T...G | ========== ====== ====== ====== ================================ ====================================== ================== 58 32 99.3 35 GTCGCACTCTTCGTGAGTGCGTGGATTGAAAT # Left flank : TTGATGCATATCCACCATTTTTGTGGAAGTAGGTGACCGATAATTTTAGTGTTAATTACGTACGATGTGAGTACAATATCAGATGGTGGGAAAAGAAGACTAAGAAAAGTAGCGAAAAAGTGTGAGGATTTTGGTGTACGCGTTCAAAACTCAGTCTTCGAATGTATTGTTGATGCAACTCAGTTAAAAATACTAGAAATTGAACTAAAAAAAATAATTAATCCGGCTGTCGATAGTTTGAGATTTTATAAACTAGGAAACAATTATAAAAATAAAGTGAAGCATGTAGGCGCAAAAGAAAGTTTAAATGTCGAAGGGCCATTAATCTTCTAGTGCGAACCTGAAGCACACATGAAAACCCTAGGAGACTCGCACCAGAAATGATTGAAAAACATTCGAAGATTGGGTAATATTAGTAGAGTAAGTAAGTGGATAAGTATCTAATGATCTATTTTTACTATAAATTTGCTGAAATTAAGTTTTTTTAGTACTTTTTCGCA # Right flank : TTTGAATCTTCCCATTAAACCTACTTCCAACCCACCCTCTTTTCATTTCCGAAACCGAATTATATCCAAAAAATGAAACCTAGATGTATAATAGAACGTATAGTATATAGACGAAATTATAATAATGACACTGTCCAGCTTTCCCGTTGCTTACTAGGTCCCGGGTCTTAGACAGTTTTCCATCTACGGACTGTTTAGAATGTTAACCGGACTGTACATAATGGATAGAAGAGATCTGCAAGGGGTTGGGTGCAATGGGAAGAACGATATATATTGTACTAACCGATACGGGGACATTGTTGTCTAGGGCGATTGGATTGTACACACGGGAAGATTTGAATCATGCGTCGATTGCGTTTGATGAGCAGCTGACGGAGATGTACAGTTTCGGCAGAAAGCAGCGGCATAATCCATTTGTTGGTGGCTTCGTGAAGGAAGAGGCTGCTGAAGGGATATTTCGGGATGCAGATTGTGCGATTTTCAGCTGTGAAGTTAGTGAT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTTCGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTTCGTGAGTGCGTGGGTTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 10446-12008 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBEL010000008.1 Filibacter limicola strain DSM 13886 Ga0244518_08, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 10446 32 100.0 34 ................................ GGTCATGATGAATCCAGGTCAATCATACGCAATC 10512 32 100.0 35 ................................ ATGTCGTCCTCTCCTTTCTATTTAGTAGATGGTTG 10579 32 100.0 33 ................................ ACGCTCACCCGGGACCAACGGCATCAAATCTTT 10644 32 100.0 34 ................................ GCCAAATCCCGTCATCCACGCCACCAATGATCGG 10710 32 100.0 35 ................................ GGTCCGTATAAAGGTATTGGCGGTAGTCCAAGTAC 10777 32 100.0 35 ................................ GAATATGTGCGGAAATTATCGCCATACGATTCGTC 10844 32 100.0 34 ................................ TAGTTCTCTGGCAGTCATTTGTTGGGCTAGAATT 10910 32 100.0 34 ................................ TGGCTAACATCCAGGCAGCAGGAACAGGTCTAAC 10976 32 100.0 37 ................................ CTCTTTCGTTCTGTCACGGTCGATAGCTCCCGGTGCA 11045 32 100.0 36 ................................ TAGAATGTCGCCACCTGACCACCCTGCATGTTGTAA 11113 32 100.0 35 ................................ GTCATCGGCAACATCCACCTGTTCAAATTGATTTG 11180 32 100.0 35 ................................ CGTAGATATCCCCCTTCGACATTTTAACAATCCGG 11247 32 100.0 35 ................................ AAAAAGTAAAACCTACAAATCGAGGGCTAAAGAAG 11314 32 100.0 36 ................................ AATTAGGATGCGGGCAGTATATTTCGTCATCCGTCG 11382 32 100.0 33 ................................ ATCGCGTTGTAGTGTTGGAGCTGATGTTGCATT 11447 32 100.0 34 ................................ CGAACAAATCCATGATGCGAGTGATTGAAAAGTA 11513 32 100.0 34 ................................ TTGATGGGACCAATCGGATGGGTAACGGCCGGAA 11579 32 100.0 34 ................................ TCCTTCTTTTGAAAGGATACGTTGACCTGTAAGT 11645 32 100.0 34 ................................ TGAGGATGACCTATCAGGTTTAAACGTGTCAATG 11711 32 100.0 34 ................................ TTGCGCGAGGAAGCCCCGTTGAATCCGCGAACGT 11777 32 100.0 34 ................................ AGCCATGTCATTACCTCCGCTATTCGCGTATTTT 11843 32 100.0 35 ................................ GATCACCAATTTGGCGTTGACGATGTATGGGAAGG 11910 32 100.0 35 ................................ ATAAGGTGTCATCGGTATTACCTCCGTTGTTGTGA 11977 32 93.8 0 .....G........................G. | ========== ====== ====== ====== ================================ ===================================== ================== 24 32 99.7 35 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : TATGAAGCATATGTTTTTTATACACCAGTATTCGCCAAACGAACAGGTGTGCACGAAGAGGGCTTGGAAGTATTTCGGGATTTTCTTGTGGATATGTGGGATTTAGATCATTCTGCAGCGCGTGGACGTATGGCTTGCAGGGGCTTTATGTATTTGCGCGTGATAGCAAATTTGGTAATGCACCATCGTATCAGCTGTTTGATAAATTGGATATCAAAAAAGTATCTGAACAAGTCGCCAGTTCGTATAAAGATTATGAGGTAGCAATTGTGAGGAATTGCCAGAAGGCGTTGCACATTGCATAAAGTAGTCACGTTTTAATCTGGCTTTTTAGTGCGAACCTCTAGCGCACATGGAAACCCCGGAGCATTCGCACCACAATTCGTTTGAATAATCACTAGAAATGGTATAAAATAGATTTAATACCACTAATAATAAGTTTATTAACTGTTAAGATGTATAAAAGACTGTTTAATGGAGAAATTTATCATCTTTTCGCA # Right flank : TCTGCACGCTTTATGTAACTGTGCGAGGTGTAAGGGAATAATTTTAAGTAGTGAAAACGCGTAAACTGTACACGACTTGTTCTTGTAATAATTCAATGACTGTATTTTAATAGATGCACGTCTAATTGGTGATAATAGTGTTTGCTAAATTACAACCAGATGTCAATTTGATGTCATGGAGGGATATGGGTTTAACTTTTGCCAACTATTCGTTATGCTACAATCTAAGCTCAAGGAATAAAGAGCGACAGATTTGAAAGGGGTTTACATGATATGAAGTTTAAAAAAGTCCTACTTCCGTTTATAGCAGGTGCGCTAGCATTAAGTTTGGCTGCTTGCGGTGAAGAAGATAAAGCGGCAACAGATAAAACACCTCAAGGAGAAACAAAGCAAGAAGCGACTAAGGAACAAAAAGCATCTGCAAAAGAGATGCAAACGAAACTAACCGAACAGCAAGTGGACAACAACAAGGTAGTGGCTGTTGTAAATGATGAAGAACT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //