Array 1 3002604-3001234 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_012731.1 Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
   3002603	    28	 100.0	    33	............................	TTTTGCACAAGTATAAAAAGTGTAATAAAAATC	
   3002542	    28	 100.0	    33	............................	CACCACGATCTCTATCACCGACGCGCCGACTAC	
   3002481	    28	 100.0	    33	............................	TAGCGGTGGTGGCCATCGATAACCTTCACGCCC	
   3002420	    28	 100.0	    33	............................	CGCTGTATGCCCCCCATCCTTCGCAAGCACTAC	
   3002359	    28	 100.0	    33	............................	CGATGACAACTTTGCCTACTTCGCTGCGCTGGC	
   3002298	    28	 100.0	    33	............................	TGCGGGTGGATGACAATAACGCCTGGCGCGCCG	
   3002237	    28	 100.0	    33	............................	TTCTTCATTAAGCCAGGCAGAGCCGCCATGAAT	
   3002176	    28	 100.0	    33	............................	CCATTTCGATCTGGTCGTAGACGTCTTCGCGGT	
   3002115	    28	 100.0	    33	............................	TTCGATGGGGTCCGACTATATCCGGATAGTAAA	
   3002054	    28	 100.0	    33	............................	TCAGGGTGTCGAATTTCTTCTTTTTCCTGGTAT	
   3001993	    28	 100.0	    33	............................	CTCAGATATCGAAATAGCCTGGCGTCAGGCAAT	
   3001932	    28	 100.0	    33	............................	CAGATCAAAGCCTGGACTGAGCGTCTTAGTGCG	
   3001871	    28	 100.0	    33	............................	TCGCGAAATTCCCCGCTGCGACCTCTTATAAAT	
   3001810	    28	 100.0	    33	............................	CCAAGCTGGTGCACGCGGGCAATTCTGGCGGCA	
   3001749	    28	 100.0	    33	............................	TCAGCGGATCTGGCATACGTGCAAAAAATATCG	
   3001688	    28	 100.0	    33	............................	CCTGTTAAGGATGACGCGGGGAAATGGGTTATC	
   3001627	    28	 100.0	    33	............................	CAACCGGCACCGTGGCTGCAGGTGACGATTCCA	
   3001566	    28	 100.0	    33	............................	CACATCGATGAGGACTTTTTTAAGTCTAATCTG	
   3001505	    28	 100.0	    33	............................	TAATGGATCATCTATCACCCTGGCAAATATTTT	
   3001444	    28	 100.0	    33	............................	TGAAGGTGAGCGCCAAAAGGAGTGGAAGCATGC	
   3001383	    28	 100.0	    33	............................	CGGCTGCGTTATCCGGCAGCACGAACTGGACCT	
   3001322	    28	 100.0	    33	............................	TGACCTTAGAGGCTTCACTCAGTGCCACTTTTT	
   3001261	    28	 100.0	     0	............................	|                                	
==========	======	======	======	============================	=================================	==================
        23	    28	 100.0	    33	GTCTTCCCCACGCACGTGGGGGTGTTTC	                                 	       

# Left flank :   TTTACAAAGAACGGCTCTGTATTGATTTGGCATTTTCACTCTCGAGGGAAATGGCGGGCCGCTACGATAAACACAAAGTCTCTGAGGCATTCAGAAAGCGAGTGATAGCCCTGGATTTGCTCAACCTGATTGCGGCCGATATCAATGAGCTGATGGGAGGGAAAGGTGCTCGTCGTACTGGCAAATGATCTGCCGCCAGCGGTGCGTGGACGAATGAAGCTGTGGTTTGTCGAACCACGGCCAAATGTTTTTGTCTCAGGCGTCAAAGATTCGGTCGCGCAAACCGTTGTTGATTACCTGTTGCAGTACACGCCTGTGGAATCAGGCCTGATGCTGTTTCGCAGTATTCCTCAACCGCCTGGTTATGAAATTCGCTACAAGGGTGAGGTCAGAAAGCCGATTATTGATCTCAGTGGGTTACAGCTGATTATTGAAACCCTAAAACTGTCGTAATACGTGGATATTGTGGTTAAACTCTCGCTCTTTCACAATATGTTGGT
# Right flank :  TTGTGAGGGGTCTACCAGCATTGGCGTACTGGAGTCTTCCCTACACATGTGGGACTTAGCAATAAGCGGAATACTCGTATTAGAATAAATATTTTATAGCCAGCGAAACTTAAAATAATTTTTAGCTAATGAAACTGTCGTTTGGGAGAGGTAGGAATATTTTATTGCGAAAGAGAAGGGAACTGTTTAAAGCAATAACGGCGAATGATTCTTATAAAATGAAGGATAGGGAATTCATATGTTTCGACTTTACCAGTCACATGATTTAATACGCCAATTAAATCCTGAAGACTTTCAATATATTTTGACACCAGCAGGTTCGCTAAGAGAAGCGTGTATAAATTACGACCTCTCCTGTGAGGCGAATGGTCACAGCCTCGCTTTTGGCTTACCGAAGGAAATATACAACTCATCTCCACATAAAAGGCCATATGAACGAAGGCAACGTAGCTATGCAGATCCTATCTATGATGAGGTAGAGCACAGGTTACAAATTGGCT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTTCCCCACGCACGTGGGGGTGTTTC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-10.80,-11.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [46.7-63.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.14   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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