Array 1 182475-179825 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHUF01000003.1 Klebsiella pneumoniae strain KP_063 NODE_3_length_350639_cov_13.9759, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 182474 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 182413 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 182352 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 182291 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 182229 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 182168 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 182107 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 182046 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 181985 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 181924 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 181863 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 181802 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 181741 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 181680 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 181619 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 181558 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 181497 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 181436 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 181375 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 181314 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 181253 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 181192 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 181131 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 181070 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 181009 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 180948 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 180887 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 180826 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 180765 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 180704 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 180643 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 180582 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 180521 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 180460 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 180399 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 180338 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 180277 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 180216 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 180155 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 180094 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 180033 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 179972 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 179911 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 179853 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //