Array 1 4133-2652 **** Predicted by CRISPRDetect 2.4 *** >NZ_CACSHG010000004.1 Tenacibaculum maritimum strain JIP 10/97, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 4132 35 83.3 30 C..T..AAC.-......................... AATAAACCTTATCAAGATGGAACAAAAAGA 4067 36 100.0 30 .................................... CCTTCCTCAGAATCTAAAGTGATGACTACC 4001 36 100.0 30 .................................... CGTTCCTTATCAAATGGATGCCGTTACTAT 3935 36 97.2 30 ..............................A..... AATAGGAGTTTTAACAGATTTTAAGGAATA 3869 36 100.0 30 .................................... ATTATTGAGCTGGATGATGATATTCTAGAT 3803 36 100.0 30 .................................... ACAGAAGGTGCTCTTACGCCATTCAACTTA 3737 36 100.0 29 .................................... TAAATCCTCCAATTGAAGTTGGGGAAACA 3672 36 100.0 29 .................................... TTTGATTTTGAGGGGGTGTCTTTGAGAAT 3607 36 100.0 30 .................................... TCAGCTACATAAATTGTTTCGTTTCTTAAC 3541 36 100.0 30 .................................... TGTTTTATTAATGCTTCAATGACTTTGGTT 3475 36 100.0 29 .................................... AGAGTTTGTCCTGGAATAAGTTGATCTGT 3410 36 100.0 30 .................................... AAACCAATTCTTCACCAAAGCTCTCATATT 3344 36 100.0 30 .................................... GGAAAAATTGCTGCAACTTATAGCACTAAA 3278 36 97.2 30 ..C................................. GAAAAACGTAGAAAAGAGGGGTTTATTTAT 3212 36 100.0 30 .................................... AGAGCTAAAGTGATTAAAAAGCTGCAATCT 3146 36 100.0 30 .................................... TAGGGCAATTTTTAGGATTAACAGAGGTAG 3080 36 100.0 30 .................................... TCTTCTATGCTCTTATTAAATTCTTCTTCT 3014 36 100.0 30 .................................... CCTATAAACGATGTAGTTTTTATTCCTCTT 2948 36 100.0 30 .................................... TAAAAGATTGTCGCTTTCGACTTTTTCATA 2882 36 100.0 29 .................................... TTTACCGAAATGTTTTGACAAGCTAATAA 2817 36 100.0 29 .................................... AAAATGGAAAATTTAGCACATCATTAAGC 2752 36 100.0 29 .................................... CTGAAATTAAATACTTCTTAATGTATTGT 2687 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 99.0 30 GTTGTGGTTTGATAAAAGATTAGAGATAACGATATT # Left flank : GTACCGTTAAAAAATACTGTCAACCAATATGTAAACCCCAAAAACAATCACCATATATTAATTTATAAAAATGCCAAAGGAGTCATGGAAGAAGAAGTAGTTAGCTTTTGGGAAGCGGTAGAACGCAAAAAGCAAGAAATAGACGTGTTTAAAATGCCAAAAAAGGGGAAAGAAAAACTAGCAATACTCCAAAAAAATGATATGTTTGTACTTGGCTTAGACATAGAAACAGTTGAGGAAGCATGGCAAGATAACAGCCTGCTAAAAGAGCATTTATACAAAGTGCAAAAAATATCTAGCAAAGATTATAATTTTAGAAAACATTCAGATGCAAGACCAGACGAAGCCGCAAAAAAAGAATATATTCGTATTACTAGTTTAGGAGAAGGAAAAAAAGGATGGAAAACAATGAACCCTATTAAGGTAAAACTAAATAGCATAGGAAAAATAGTAAAAGCATAGTGCTTATAGCATTAACGTTCTTTGAAATATATAAACAT # Right flank : CGTTAGCGGCTTAGCGCTTGGTAACTATATAGTTAAGGTGTTGTATCGTATTGTAAAAATGCTTCTTATAAAGATAGAAAGGCTTTATTTGAAGCATTTTTTTATTCCTATTGTATATTTTTCTTTTTATCAATAAATTGGTGGCAACTTTTTGTTTGGAAGCAAAAAAATAGTTTTTTTAACTAACATAGGCTTCGTTATGTTGTGATAAAAAGTTAAAATTAGCGTGTAATAAGACCAATTTGCAGGCATCAGAAAAAGTTGAAACCACTTTAATAAATAAGGTATTAAAACAATTCTAGTTGTAAAACAGGAGGAGGAGACGCTTCTTGGGCGTTACCCCAAAAATTCATCATATTTCCGTACTGCTTGTCTGTAATTCTTAAAATACTTATTCTTCCATAAGGAGGCAATACAGATTGTATTCTTTTTTCATGTACATCAGCACGTTCACTGCTAGCACAATGCCTAATATATATAGAAAATTGCATCATGGTAAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATAAAAGATTAGAGATAACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAGAACACGATATT with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.77 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //