Array 1 45930-44291 **** Predicted by CRISPRDetect 2.4 *** >NZ_NNBH01000014.1 Klebsiella michiganensis strain CVUAS 10037.2 NODE_14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================================== ================== 45929 29 100.0 33 ............................. TCACGCCATGCCGACAGCCAGAGTGCATCAGAC 45867 29 100.0 33 ............................. ATTTACCGGTCAGAGGGCTTGCCAAAGCGCAGC 45805 29 100.0 32 ............................. ATGAGGGGGCGAATTATCAGGTGGTGTTAACT 45744 29 100.0 32 ............................. ACTCCGCCCGCCCAGGGAGAATTTTTTTCAGT 45683 29 100.0 32 ............................. CAATAAATAGTCAGTGATCCGCCTCCCTATCC 45622 29 100.0 32 ............................. GCGTTTTCTACTTTTTGAGTAGAGCCTGAGAT 45561 29 100.0 32 ............................. ATTTCGAGTATCTGCATCAATACGTTGGTCCG 45500 29 100.0 32 ............................. AAAGCTAACTCATCTAAGGCGAATGAATATCT 45439 29 100.0 32 ............................. CGAGCCATCTTTATTTTTAATCTTTGTGACCC 45378 29 100.0 32 ............................. CGAGCGAGGCCTCCATAGTTTGCGACACCTGC 45317 29 100.0 32 ............................. GCGGTCATTTCCGCGAGGCCATCAGCCAGTTT 45256 29 100.0 32 ............................. GTCTGCCAGCTGAGCCGGTACATCAGCATCAA 45195 29 100.0 32 ............................. CCAGAAAGACCGGCAATGCTGTAGTTAAAGCT 45134 29 100.0 32 ............................. AGCACCAGCCATAGCCTCACGCCCTCCTGGAT 45073 29 100.0 32 ............................. GATGCAGAAATCAAACTTTTTGACGGCCAGCA 45012 29 100.0 32 ............................. TGCGCCGTCTCGAAACGCTGCGCGTACAGGCA 44951 29 100.0 32 ............................. TACCCGGCACCTGATTGTTATCGTCATCGACC 44890 29 100.0 32 ............................. GTACGTACTTAACAAATCTGGTGAATTTGAGG 44829 29 100.0 32 ............................. TGAAAGAATTAACGCCGGGAGAAATGACGGCA 44768 29 100.0 32 ............................. TATCATGCGCATTCCTGATTCAGCTGTTCAGC 44707 29 100.0 32 ............................. GATGATAAGACGGAAGAACTCATTGCGCTCAT 44646 29 100.0 32 ............................. TAGTTTACGTTCGAATCCACGCGGCCTGAATT 44585 29 100.0 32 ............................. CAGAGTCGCGTATCACAAAGCAGGACGAAACG 44524 29 100.0 32 ............................. CGTCTGGGGAATATCATCAGCATTAATTTGGT 44463 29 100.0 53 ............................. CCTGCCGTTGACGTCAGACATCAGACATCAGACATCAGACATCAGACACTAGC 44381 29 96.6 33 ............................A GCTCCCGCTGGACGCTTCGACATGTTTGCGAAT 44319 29 86.2 0 ............TC.......G.T..... | ========== ====== ====== ====== ============================= ===================================================== ================== 27 29 99.4 33 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : TTGGTAAACAAGGTGTTGCGAAGCGTTGCGGACAGGTTCTGATTGCCACACAGGTCATTGAGCAAAGTCTGGATATCGATGTCGATGAAATGATCTCTGATTTAGCGCCAGTGGATTTGTTGATTCAGCGAGCCGGTCGTTTACAGCGCCATATCCGCGATCGTAATGGCTTATTGAAAGCTTCTGGAAGAGACGAACGTAACCCGCCAGAGCTGCTGATCTTCGCCCCAGAATGGGATGACGAACCGCAAGAGGATTGGTTCTCAAACGCTATGCGCAACAGCGCCTACGTCTACCCCGATCATGGGCGCCTGTGGCTAACCCAGCGTGTGCTGCGCGAACAAGGGGAAATTCGAATGCCGCAGTCAGCCCGATTGCTGATTGAGTCTGTCTATGGCGAAGAAGTTGATATGCCACCGGGGTTCGTGAAGACGGAGCAGTTGCAGGAGGGGAAATTCTACTGTGACCGGGCATTTGCTAAGCAAAACATTATCAACTTT # Right flank : GTTTTTTCCCATACGCGCTCCGCATTCAGGGAATGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTCATTATTTAGTGTGGCAAAGTCCAGTTCCAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGGGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCCGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 61812-60258 **** Predicted by CRISPRDetect 2.4 *** >NZ_NNBH01000002.1 Klebsiella michiganensis strain CVUAS 10037.2 NODE_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 61811 29 100.0 32 ............................. AACGACTGTCCCATGAGCTTTGCAAATTGCAG 61750 29 100.0 32 ............................. GGCGAGCGCGTAGTTACCGCCAGCACCTCGGC 61689 29 100.0 32 ............................. TCGTTATTCGTGAGCCGTCGGCCGAGGGTTGG 61628 29 100.0 32 ............................. CCGCTGCCGATGTAACCGCGCTTCTGTGCCAG 61567 29 100.0 32 ............................. CCGCTGCCGATGTAACCGCGCTTCTGTGCCAG 61506 29 100.0 32 ............................. CGCTTTGGCTTCATTGCGTTCTTTGTAGGGAA 61445 29 100.0 32 ............................. CGCGACGAGTGGGACGAAACGCCGCCGATCCA 61384 29 100.0 32 ............................. CGCGGGAGCCGACGTTATAGGCGAACGATACC 61323 29 100.0 32 ............................. GTTTTCAGGGATGTGCATTGAGTGAATGCATA 61262 29 100.0 32 ............................. ACCGAGGGTAATCATCGTTTAGCAGAACGTTA 61201 29 100.0 32 ............................. CTAGCAATACGAAAGGTGGAAACCTTTTGCGC 61140 29 100.0 32 ............................. GCGGATATAATAATGGCGATCATCCTGCAGGC 61079 29 100.0 32 ............................. GGAGAGGCAGTCGAAATTTATTAACGCAATGC 61018 29 100.0 32 ............................. GCAGTGACGCCCAGTCCAGCGTCACGGTATAG 60957 29 100.0 32 ............................. CAACCTGGACGCTGCAATGGATATTCACGCTG 60896 29 100.0 32 ............................. TTCTTTTGAGCAATACTACCTGAACCGTAAGG 60835 29 100.0 32 ............................. GGAGCATTTAAAAATCTGCTGCTGCACGCACC 60774 29 100.0 32 ............................. TTCTTTTGAGCAATACTACCTGAACCGTAAGG 60713 29 100.0 32 ............................. GGAGCATTTAAAAATCTGCTGCTGCACGCACC 60652 29 100.0 32 ............................. TTCTTTTGAGCAATACTACCTGAACCGTAAGG 60591 29 100.0 32 ............................. GGAGCATTTAAAAATCTGCTGCTGCACGCACC 60530 29 100.0 32 ............................. TGCGCGCGCTTCTTCTTCATCCGCTCCTTTGG 60469 29 100.0 32 ............................. GACTTATAGCCATCGCCCATGTCGAATACCCA 60408 29 100.0 32 ............................. GGGCGGCCGGTAGTCGTCCTTTCCAATAATGA 60347 29 96.6 32 .............T............... AACAGCCCACAAAACTTTTTGCATGGGGCCGC 60286 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================ ================== 26 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCATACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACTCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTGTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGTGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : CAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCTTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGATCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //