Array 1 603-203 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUDW01000006.1 Gemella cuniculi DSM 15828 H612DRAFT_scaffold00003.3_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================== ================== 602 36 100.0 30 .................................... CATTCCCCCAACCATTAAGCAACAATTGCT 536 36 100.0 30 .................................... ATGCAGTTTATGCTGACACTACAGAGCCTA 470 36 100.0 31 .................................... CATCAGCCAACAATAAGGTTTCTTCTTTTAA 403 36 100.0 29 .................................... TTTTAATATAGTGTTGCAAAGAATGTTTC 338 36 97.2 66 .........G.......................... AAATAATGATTTTTGTCCAGCTAGCTCTATGTTTGAGAGGTATGTAAATTTTTTGGTATTATATTA 236 34 83.3 0 .............A..........A.A-..-....T | ========== ====== ====== ====== ==================================== ================================================================== ================== 6 36 96.8 37 GTTTGAGAGATATGTAAATTTTGATTTCTACAAAAC # Left flank : GATACTTTGTCATTGTTAAAGTTAGGTGATTTTAAACTTCGAATTGAAGAAAATAATTATTTGGAAATGCTTATTAAATTTTTAAAAATTTTGGTGGAACTGTGTGGTATAAAAGTTATTTTTATAACGGAGTTGCATTCATTTTTCGAAGATAGTGAAATAGAAGTTTTATATAAAGAGGTATGTTTGAATAAAATTAATATTATAAATGTAGAACATCAACAGTTTGATAATAAAACAAATGATAGGTATAAAGAAATAGTTTATATTTTTGATAAAGAAAATTGTGAGATATAATCTTGATTTTTTTTAAAAGTAATTGTATAATATAAGTGTATTCAAAATTTACATATCAAAGTTCAAATAAAGATTTATCTATATTGCCTTCGGGCTTGGATCGTGATTAATTCGTTGTCTTCGGGCTTGGAATTATTGTCGATCTATTTTTTATATATAAAAATTCAAAATTTTTATCTTTTGAATCTCAGTTTATATTTGAG # Right flank : TTATAAAATAAATTTTATGTATAAAAGAATGTACATGAAATTTATTTTTTTAATTGATGAATTGCAAATAAAAGTGCAACACCTAACTCAATAAATTAATCTCGTGTAACAATGCTTCGAATGGTGTTGAAAAATTTAGACATTTTCTTGGTCTATTATTCAATTGGACTAAATTTTCAATTAGTTCAGTCAAATTAATATTA # Questionable array : NO Score: 2.65 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:-0.44, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGATATGTAAATTTTGATTTCTACAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.60,-1.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [88.3-85.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //