Array 1 24322-26971 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACYOZ010000015.1 Klebsiella pneumoniae strain CFSAN059645 contig00015, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 24322 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 24383 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 24444 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 24505 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 24567 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 24628 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 24689 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 24750 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 24811 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 24872 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 24933 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 24994 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 25055 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 25116 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 25177 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 25238 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 25299 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 25360 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 25421 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 25482 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 25543 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 25604 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 25665 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 25726 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 25787 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 25848 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 25909 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 25970 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 26031 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 26092 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 26153 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 26214 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 26275 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 26336 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 26397 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 26458 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 26519 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 26580 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 26641 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 26702 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 26763 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 26824 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 26885 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 26943 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //