Array 1 247783-248605 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_UJCT01000003.1 Klebsiella pneumoniae strain EuSCAPE_LU004, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
    247783	    29	 100.0	    32	.............................	ACCGGCTCGCGGAAAACGCGGATCAGGCTGGC 	
    247844	    29	 100.0	    32	.............................	TCAACGCGCTGGTGCAGGCAAAAAAACTACAG 	
    247905	    29	 100.0	    32	.............................	ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 	
    247966	    29	 100.0	    32	.............................	GCGCCGGAATCCAGACCGAGATCAACCGCGAC 	
    248027	    29	 100.0	    33	.............................	CGAGTCATTTCCCCGAGTCAAAAGCAGTAAAAA	
    248089	    29	 100.0	    32	.............................	CGTGACGCGCGACGATATTTTAGCCGCGCATC 	
    248150	    29	 100.0	    32	.............................	GAAGCTAACGAAGAAATGAAAGTTGCGGCGGG 	
    248211	    29	 100.0	    32	.............................	AAATACTCGCGCAGGTGTTCAGGCTGCTCTCT 	
    248272	    29	 100.0	    32	.............................	AATTAAATACGGCAGAAACACTGGCCGCAGGA 	
    248333	    29	 100.0	    32	.............................	GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 	
    248394	    29	  93.1	    32	.....T............A..........	GCGGCGTCAGGTGTGTGGCAGAAAATTATTGG 	
    248455	    29	  96.6	    32	.......T.....................	TCTGACTGTCGAGGCATGATCTGCCCTCCGAT 	
    248516	    29	  96.6	    32	A............................	ACTGATATCACCGAACTGGCTCGGGCCATGAA 	
    248577	    29	  75.9	     0	...........ATTC...A......G..C	|                                	
==========	======	======	======	=============================	=================================	==================
        14	    29	  97.3	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                 	       

# Left flank :   GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAATCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT
# Right flank :  CGTCCACTAACGTTATCGATCCTGAGGGTGGGTACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT

# Questionable array : NO	 Score: 6.12
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-11] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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