Array 1 998837-999232 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP063138.1 Francisella philomiragia strain 18844 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 998837 37 100.0 35 ..................................... CAAAATTATTAGTAACGTAATTATTAATAATGTCT 998909 37 100.0 34 ..................................... ATAAAAGTAGATATCAATTTGCACAAATCAAAGG 998980 37 100.0 35 ..................................... TGTTCGACATCTAAATAAATTTCTTTTTGCTCAAA 999052 37 100.0 34 ..................................... AGAATTGGTTTAGATCTTAAGGATTTGAGCGTGT 999123 37 100.0 36 ..................................... CGTTAAATTTTACCTAGCCCACAAGGGGCAAATAAT 999196 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 6 37 100.0 35 GTTTCAGTAGCTAGAATATTTGGTATACTACTGTTGG # Left flank : CTAATCATAGTAATAATGCTGAGTTTATATCTGAGCTAATAAACTATATCTATAGCAATAGCGATTATAAGAGCATTATAAATAATGATCTTGCTTTGGTTGGTTTCTCTGCTGGAGGATTAGCTACTTTGATAGCGACATCAGAGAATACTAGGGTCAAGCTTTGGATAGGATTAGACCCTGTAGATGTAGGCAATCTTGGCTCTCAAGCCGCCAAGAATATAAATTGCCCAACCTATATAATAGCTGCCTCAGCAAGCGCATGTAATGCCAATAATAACTACAAAGACTTCATAATAAGTCTAAAAGATAATACTCTTGTCAAAATTGATGGAGCTGTCCATGTCGATGCTGAATGGCCAACTAGTAGATTCGCTGAGTTGTTCTGTGGTAAATCCACCCAGCAAAAAAGAGAAAGATTTCATGATGATGTGTTGACGATTTTGGATAGAAGTTTTGAGAATAAAAGTTAAACATAAAACTCAAAAAGATATTAATAA # Right flank : GTCAAAATTTATGGGAAGTATTTATAAATTTAGGGTCTAGATAACTTTAGCACTAAATTTTCTTACTAAAGTACACATGATTTTATATAAATCATTATCTTTGTTATTCCACCTAAATTCACACTCTTTTAAATGTAAAACAAACTTATCATCACTTAATCCGTTAAATTTTGCAAGTCTTCTTTTAGAGAAAGACCAAAATGACTCTATACCATTAACATGGTTTTTACCACGAGCAAACTCATTGTGAGAGTGATAAATACGATAGTGATCATAACCGTTTAGAATAAGCCCATCATATGCTTTCCAGCCATCAGTATAGATTGTGCTGCTTTCGAGTATTTTGCCTTGTATTATAGGCATTAAGGACTCTTTAGAGCAGTTTGGTACAATAGAAACGTAGACTTTATTATGTTCATCGCGTTTTAAAACACCGAATACTGGTGTTTTACCAACTGCACCACGACCACGTTTACCTCGTACTCGTTTAGCTCCAAAAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTAGCTAGAATATTTGGTATACTACTGTTGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.30,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [81.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 1002511-1000018 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP063138.1 Francisella philomiragia strain 18844 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 1002510 37 100.0 36 ..................................... TGCCAAGTAACAATAATTCATTTTCATAATCTTTAC 1002437 37 100.0 34 ..................................... CAGGCAGAACAAGTAATTGAATTTCTTCCTTGAG 1002366 37 100.0 36 ..................................... GCAACCAGTCCCATAGATAACTTAGGATTTTCCATA 1002293 37 100.0 35 ..................................... GCTCCACTAGCGTTTGCACCGCCAGCATGAATTGT 1002221 37 100.0 36 ..................................... ACTGGTTGTATTTGATTATTTATTACTGGATAGAAC 1002148 37 100.0 36 ..................................... AGGAATAAGCCTCCATCGCCAATACGTAATGAAGTG 1002075 37 100.0 35 ..................................... GATGTCGAAGAGTTCGACATTGTCGAATCAAAAAA 1002003 37 100.0 35 ..................................... AGTTAGCTCCTGAATTAATTATTACTTGTCTTGAA 1001931 37 100.0 36 ..................................... GTGTTGTTATGTTTTGTTTCTCTCTGTTGTATGAAT 1001858 37 100.0 37 ..................................... GCGATCGTTTCAGCATCAGTCGCATTTGCTTGAATAC 1001784 37 100.0 36 ..................................... CCACCACCGCCTGAGTTCCTATAATTTCTGCCAAAA 1001711 37 100.0 35 ..................................... GTGATAGTGTCCTGTTGTGCGATTGCTTTTTGGAA 1001639 37 100.0 35 ..................................... TCAGACAACACAGATGCTATAACAAAAGGCGATCT 1001567 37 100.0 35 ..................................... AAAAAACCTTGTACAGCACCGCCGGAATGATCACA 1001495 37 100.0 36 ..................................... TGCATCTTATTCAATTCTTTTATGGCATTAATTCTG 1001422 37 100.0 35 ..................................... CTTTATCTCAGCGAATAAGCTATAACACAGCTAAA 1001350 37 100.0 35 ..................................... CAACAGTTGCGATCGTTGGAATTGGTGGGGTCGTT 1001278 37 100.0 34 ..................................... TAAAAACAAACAATTAAAGATAGATGCTTTTATG 1001207 37 100.0 35 ..................................... AAAAAAATAAAAAATAATTAAAGATTGGTATTGAC 1001135 37 100.0 35 ..................................... AATTTCGCCAAGTATTATCACAAACCCTTTCAATA 1001063 37 100.0 36 ..................................... TCAAGGTTTCTACCTTTTTTAATTGGCTCAAATGAG 1000990 37 100.0 35 ..................................... TTTATTTCTTAGTGTTTCTTTACTTCTCAAACTCT 1000918 37 100.0 35 ..................................... CTAGGGATGTTATTGGGATCATAACTAAGTACGTT 1000846 37 100.0 34 ..................................... GACACTGTTTTTTTTGTAACAGGTTCTGTACAAG 1000775 37 100.0 36 ..................................... ACTTGATTACTCGGAAGCTTTCCAATTTTTTAGTTT 1000702 37 100.0 35 ..................................... TTAGCGTGTAGCGTAGCACTTCCCACACCTAAACC 1000630 37 100.0 35 ..................................... CATCAAATCCAAATGTATGATTTTCTTCTTTTTTC 1000558 37 97.3 35 ...........G......................... TGTTTAAGCATTAATACATTCAAGCTTGGTAGAAA 1000486 37 100.0 35 ..................................... CCCTTTACTTGATACTATTATTAGAAATAATTCCT 1000414 37 100.0 35 ..................................... TCTAAAAATAAGTCAATAACAAGTTTTTCAAAATT 1000342 37 100.0 36 ..................................... AAAATGGAGAATCCTTTTCACTATATTTAGGAAAAA 1000269 37 100.0 34 ..................................... AAAACGATGAAGATTTTTTATATGGCGATGATAA 1000198 37 100.0 35 ..................................... TCAGATACTTGAGTAGCACCTACAATAGTACCATT 1000126 37 100.0 35 ..................................... TGGAAGGGCATGTTTTGCTATTCCCGTTATGTCAA 1000054 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 35 37 99.9 35 CCAACAGTAGTATACCAAATATTCTAGCTACTGAAAC # Left flank : TGTATACAATGCGAGTATCTTAATTTTTGTAATGATCGCTAAAATATAAAAGTTCGCCGAGTTCAGCCATCTTGTTAAAAGATCACCGAGCCTGTCGAGGTGCCAATATTGTAAAGTATAGGGAAAGCTAATCAGCAATACTCAGCTTGACTGGGTATCTCTATAATTATAAGATTCCCATTTTCATGGGAATTTCGATGTATTTATGATTAACTCATTCGCAATACCCAACTTGATTGGATATCTATCAAATCCATATTTACACAAACAAAAAAAGCCACTTATGTGGCAATTTTTGCTTTCAAATTAATCAGACGTGTCAGACAGAGGTCCGTTCAAAATACTTTTAAATGATTACAGAGCATTAAATATTTGGTACAAAATCTATTTTAGATACTTTTTCGCAAAATGTCTACTTTTTTTGACAAGTAGGGCATTTGCGAAAAAATACCAGTCAATAATTCTCCCAAAGCCTTATAAACACTAGGTTTATTTTGGCT # Right flank : TTAATAAATTTAGGGTCTAGATAACTTTAGCTTGTCAAAAATCATTGATGGAGCTATATTTTATCTATGTTTGGAAGGTATAAAAAACGTTCGCATATTTCAGATGCTAAAATTAGAGAGATTTTGAAGTGTTTCTGCTTGGATTTAACAGCGACAAATACGAGTAAAATAACTAATGTTAGCAGAGTAACAATTAACCGCTATTTTGATAGATTTCGTAAAATAATTCTATTATCTGATGAAAAATTCTTAGCATCTACTGGAGAGTTTGAACTAGATGAGTCTTATTTTGGAGCTAAACGAGTACGAGGTAAACGTGGTCGTGGTGCAGTTGGTAAAACACCAGTATTCGGTGTTTTAAAACGCGATGAACATAATAAAGTCTACGTTTCTATTGTACCAAACTGCTCTAAAGAGTCCTTAATGCCTATAATACAAGGCAAAATACTCGAAAGCAGCACAATCTATACTGATGGCTGGAAAGCATATGATGGGCTTAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAACAGTAGTATACCAAATATTCTAGCTACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.30,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //