Array 1 327299-327987 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR733721.1 Halomonas sp. 153 isolate Halomonas sp. 153, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 327299 28 100.0 32 ............................ GCCAACGCCGCGCAGTCGGAGGTAAAGGGCCA 327359 28 100.0 32 ............................ GCCCAGAACAACCGTGCCGAACTCGACGTCTT 327419 28 100.0 32 ............................ TGAATGAACTCACAATGCCTGGAACCTATTTT 327479 28 100.0 32 ............................ AATAACGAGTTCACCTGGAAAGAAGTCAACGG 327539 28 100.0 32 ............................ GTAAATCGCTGGGCATGTTCTGCAGCGTGTAC 327599 28 100.0 32 ............................ AAGTGCCGTAACGGGCACGGTAAGCACAGGCG 327659 28 100.0 32 ............................ TTATCCGCTGGCTCTTGGGGGAGAAGAAGCGC 327719 28 100.0 32 ............................ AGCACGAGATCGCGCACTGTTTGGGTATCCGG 327779 28 100.0 32 ............................ GTGCCAAACGTCGTCAGCCGATAGGCAAACCC 327839 28 89.3 32 ..T........TG............... TGGCGGCCTGACTGCATTTGCACGCTGCCCGC 327899 28 89.3 33 ..T........TG............... ATTCTGATGGATGCTTGGCACCCTTGCTTAGGT 327960 28 89.3 0 ...T........T........C...... | ========== ====== ====== ====== ============================ ================================= ================== 12 28 97.3 32 GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : CACGGCTGGGGCAATTGATGGGCGCTGACTGGCTAACCGGCATGCGTGATCACACCCAAGTCAGCGAGGTGCTTGCCGTGCCCGCCAATTCTCAGCACTTCAACGTGGCGCGCAAGCAGTTCAATACGGGCAGCCCAAGCCGTGCCAAACGCTATGCCAAGCGGCATGACATTTCGGAAGATGAAGCGCAGCAGATTTATGCCAAGCTAGCGGCGCGGCGCATTGAGCTACCCTTCGTGCAAATAAACAGCCGCTCCACCCAGCAGCGCTTTAGCCTGTTTATTGAACACGGCAAGCCTCAGGAAAAACCGGTGGCGGGTTCGTTTAATCACTATGGCTTAAGCCCTGACGCCACAGTGCCGTGGTTTTGACCCTTTTTTCTAACATGAAAATAGGCGACCAATAATCAATCACTTAGCGGTGTCGCTCGAAAAAGGGTGATACCGCTTTTTTTGGCTAAAGCTCTTTAACAATCAGCACATTAATTTTGATATGCTCTA # Right flank : AGCTCCAAAAAACTCAAGGTAATGCGGGATATTGAGTTTATTGCTGGCTCAGTATCGTACTTCATCCCTGAATAGCTGAACCTTTTATTAATTAAAATTGATAGCATAGGAGCATTCTTTAAAAGGAATTTCCACTTATGCACTCGTTGAATAAAGCCATTGTTCTCGCCGCCGCGATTACTCTGGCGCCTCCTATACTGGGTCAGCCAGTGAAGGCAGGAACCGAGGCCTATAACAATGGTGATTACGCCACCGCTCTGAAGTATTTGGAGCCGTTGGCTGAACAAGGCGATGCCGACGCGCAGTACACTCTTGGCGTCATGTACGACCTCGGCGAGGGAGTCACCCAGAACGCCTCAACAGCCGCCGAGTGGTACCGAAAAGCCGCCGAACAGGGCGATGCCGACGCGCAGCTAAGTCTTGGCCTCATGTATGAATACGGCGAAGGAGTTCCCCAGAGCACCTCAACGGCCGCTGAGTGGTATCGCTGGGCCGCTGAG # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 2461983-2462430 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR733721.1 Halomonas sp. 153 isolate Halomonas sp. 153, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2461983 28 96.4 32 ........T................... CGGTGCAGATTCAAGCCGAAAGCCGAGCAGGC 2462043 28 96.4 32 ........T................... CGCTCGATGGCGGGCTAGGGAGTTAAACGTAT 2462103 28 96.4 32 ........T................... AAATGCTACCCGTGCGCAGCATGACCACCTGG 2462163 28 100.0 32 ............................ CGCGGCGAATTGTGGGACACGTTTATCGATGC 2462223 28 100.0 32 ............................ ATGGTACGCAGTGAGTCTTTTACCCATAGCGG 2462283 28 100.0 32 ............................ CGCGAGAGGAGGTGAATAAATCGATCCGGTTG 2462343 28 100.0 32 ............................ TTGGAGACGATTGTTAAACAGCAGCCAGTTTC 2462403 28 92.9 0 ........................T.T. | ========== ====== ====== ====== ============================ ================================ ================== 8 28 97.8 32 GTGAACCGCCGCATAGGCAGCTGAAAAT # Left flank : GAAATTAAGAGAAGATTGGCCCGTGGCAAAAAGCGGGCTGAAAAACGTGGTGAGACGTTCATGCCTATTAGCGTTGTATCAGATCGTTTGGTTGATCACTGCCACGTAATTCCTATTGATAGCCGCTCGTCAGGCCAACGCTTTCCGCTGTATGTCCAGCTTGAGGCACTCAGCGAAGAAAGCAAGCATGATAGCTACAATAGCTACGGCTTGGCTACACAACACTCGCATACTGGCTCTGTTCCAAATCTTAAACATATTACCTAAATATTTATAGAATATATATTGTATTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAATATATATTGTATTACTTATCAATGTCTTATCTCTTATACGCCAAGAAGGGTATTTTTACCATTTTGTGTTTATCTCGTTGATATCTATATTTTAAGTACTAACTACGTCTA # Right flank : TAGGACTGGAAGCCAGCAACGGTAATGATACACACCGCCGCAATGGCAGTAATTGTTCTAAAACCTCCAATTTTACTTGGAGGTTTTTTTATAGTGAGCCTGGGATAGCGCGCAGCGCCCAATGAGGGGGTCATGAGGGTGTCCTCTGTGGGATTGAGGGCGGATGGTAGGGCTGTCGTAAGAACTTTTCCTACAACCATCGCTCGCCATGACATCTCCAGCAATGACACCTTCCGCCACCTAGGATTGATGCCTACTATGACCTTTTTGCAACTTCATGTCTCGCTTTTCCGAGTAAATGAAAAATGTTTTTACCGCCCCCTGTGGCGCCCTTCAGTACTTAATTCAACGCAAGAAATGAGGCATGGATCTTAAATAAATACACAGGAGGTGCGCTCAGTTTCTGCGGCAAAAAAGCAGATAATCTTAATGTATATTTATGACGTGATTTTATTACAGAAGCAAACGTTCGTTTTATTTTATGTCATCTAAAAATGGAA # Questionable array : NO Score: 3.13 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAACCGCCGCATAGGCAGCTGAAAAT # Alternate repeat : GTGAACCGTCGCATAGGCAGCTGAAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.80,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //