Array 1 72453-84753 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPJN01000003.1 Halanaerobium sp. DL-01 Ga0256366_103, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 72453 37 100.0 35 ..................................... TATGTCATCTCCAGATAATCTAACTTTAGCTCCAT 72525 37 100.0 35 ..................................... GCTAATATTCCTGATGAATCTAAAGTCGCTATAAA 72597 37 100.0 36 ..................................... TCTGCTAATTCTGTTAATGTTGCATACGCCATTTAT 72670 37 100.0 34 ..................................... ATCACCTTTTGTAATATCTCCACACCAACAATTT 72741 37 100.0 35 ..................................... AATGCTACCAAACATATTACTAACAGTTGTGCCAT 72813 37 100.0 35 ..................................... ACCATAAGTGTTAACCACAGAAGATAATACATCTA 72885 37 100.0 34 ..................................... TAGTGTGCTTAACATTATAGAAATGCAGGAAAAA 72956 37 100.0 36 ..................................... TTGCCTATACCTTTAACCTCTGATAACTCTGATAGG 73029 37 100.0 39 ..................................... ATTAGAATCTAGCACCACCTTTTATTCTTATACTATCGA 73105 37 100.0 34 ..................................... TCACATAACTCTTCAAAAAAGTTAATCACATTCA 73176 37 100.0 34 ..................................... AATCCACAGTGGAATGAAAAGCAAGTTGAGAATG 73247 37 100.0 33 ..................................... GCAGAAGAAATACTGGGAAGACTTCAGAGTGGG 73317 37 100.0 36 ..................................... AGATGGAATGAAAACTGTTTTTGTAGCGGGTGTGGG 73390 37 100.0 36 ..................................... TGATGTAGCCTCAAATATTAATTCCTGTGATTTGTG 73463 37 100.0 35 ..................................... TGTTACATACTGGCTAACCTCTGTGCCATCGATTG 73535 37 100.0 36 ..................................... AGCCATTGTTCCCTGAAAACCTTGGAAAGCATTTTG 73608 37 100.0 34 ..................................... TTTACGGTTGGAAGCCGGGTGCTGCACACACTTG 73679 37 100.0 35 ..................................... AAGTGCATTATTGCCGGAGCATAAGCTGTTCCGTT 73751 37 100.0 35 ..................................... CACATTTTTTCGCACATTTTAATATGTTCCATCGG 73823 37 100.0 36 ..................................... TATGCAATGTCTTTTGGCCTATTCCTTTAACACTTG 73896 37 100.0 34 ..................................... ATCCCAACTATATCCACTATCCCCACCAACTGTG 73967 37 100.0 34 ..................................... GCCTAAGCAGATGGAAGAAAAAATAGATTATTAT 74038 37 100.0 35 ..................................... CAGATAACAAGACTGTTGGAATCTATGCTCATACA 74110 37 100.0 36 ..................................... TCTTGCATTTCAGCCATATATTCTTTGCTTTGTCCT 74183 37 100.0 36 ..................................... TTTTTGCTTTCTGATTGACTTTTGACTAATCTCATC 74256 37 100.0 35 ..................................... ACCTACTTAATATTAATAAGATAATCTAATATAAT 74328 37 100.0 37 ..................................... CCCCTTGAATTACCTGCAATGTTCATAAGAATGTTAA 74402 37 100.0 36 ..................................... TGAAAAAGTCTCTAATAACTGGATCATTAATTTTAT 74475 37 100.0 35 ..................................... ATTCATATCAAAATGATAATCTTTTTCGCCATAAT 74547 37 100.0 36 ..................................... ATCCAGAGTTATGCGACTTCCGGGAACCTATAATAA 74620 37 100.0 33 ..................................... TATCTTATTATGGTCTATTTGTCCGCTGACCTG 74690 37 100.0 36 ..................................... CGCCAAAGTTTTTCAAATAGAAGATTGCTCCCGTGG 74763 37 100.0 34 ..................................... AACCCAATTCGAGAAAATTCTTTCCTCTGCTCTT 74834 37 100.0 34 ..................................... TTTTGAAATAGAGATTATTAACTATTAAGATTAA 74905 37 100.0 35 ..................................... TATAAATTTCATTAATATCATTAGCCTGGACAAAA 74977 37 100.0 35 ..................................... TTTATGCTCTCGGTGATGAATTTACTGAACAACGG 75049 37 100.0 36 ..................................... TATCCTTCTTTCTATTTCAATTGAGATTTTTTCAAG 75122 37 100.0 34 ..................................... ACACGACCAATATCATATAAAATCAATTTCCCAC 75193 37 100.0 34 ..................................... TTCTTTCTTCATAAAATAATCATCTATAGCTTGT 75264 37 100.0 34 ..................................... AACATTAACTTGCTTGTATTCTTCATACTTTGGA 75335 37 100.0 34 ..................................... AGAACCATGAACAAGGGTATATCAGACGCACAGC 75406 37 100.0 36 ..................................... TGCCAACGGTCTGTGCCTGCCAAGCACCACCATTTA 75479 37 100.0 34 ..................................... TGCAGGCACTTGCTGGAGTTAACAGCTGATACCA 75550 37 100.0 35 ..................................... CTCCTAAGTTAAAGAACTCATATAATCCAAATTCT 75622 37 100.0 34 ..................................... TGCCCGGGCTAAACGTTTTTCCACAATCTTATTG 75693 37 100.0 35 ..................................... CACCCACAAGTTGGTGGCCAACAGGTGCAGGCGTG 75765 37 100.0 33 ..................................... AACAAGGTGCTAGAAATGGATATCAGAGGTCAA 75835 37 100.0 34 ..................................... AGATGACAAAAAAACAAAAAACTATGATGGAGAA 75906 37 100.0 34 ..................................... CTACCTGGCAGGAATACCACGGGAGCAATCTTTT 75977 37 100.0 34 ..................................... TACATCTACTGCATCTACTGCATTTTGTCGTTGC 76048 37 100.0 35 ..................................... TTGGCTGCATTAAAACTTTTTGTGCCGGCTTTGAA 76120 37 100.0 34 ..................................... GAATCTATGCGCACACAAAAGCTACTGCTATAGT 76191 37 100.0 34 ..................................... TTCTAGTTTTAACCAGCCTCGCCTAAATCCTTTT 76262 37 100.0 34 ..................................... GAATCTATGCGCACACAAAAGCTACTGCTATAGT 76333 37 100.0 34 ..................................... TTCTAGTTTTAACCAGCCTCGCCTAAATCCTTTT 76404 37 100.0 34 ..................................... ATGCCATGCTTCTCTAATCTCATTTAATTCTTTA 76475 37 100.0 34 ..................................... TATTGGATGCTACAAGTTGACAATTATGTGTTTG 76546 37 100.0 35 ..................................... TACTGTATTTGTGTTATCTAAATCAGCATTAACCA 76618 37 100.0 33 ..................................... CATTTTTATATCCCCCTTTAATTTTCAACTGGA 76688 37 100.0 36 ..................................... TTATCAGATGAATTTGTTAAGCAGCTCAAACTAGAA 76761 37 100.0 33 ..................................... AAGTCAAAATTGGAGCAGAAACAACTGGCTTAA 76831 37 100.0 34 ..................................... AGCCAGTAGAAGTTGAGGTGATATAATGCCAAAA 76902 37 100.0 36 ..................................... ATTAAAAGTGTAAAAGTTATCTAGTTATCCTTATTA 76975 37 100.0 34 ..................................... TGTTCAATTAATCTTGACATATATCTTTGAGCAG 77046 37 100.0 35 ..................................... AAACAGCTACTCAAAAGCAGATAGCAACTATTAAT 77118 37 100.0 36 ..................................... TGATGTTCGGCTCCCGCTTCTCCGGCTAATAATCCG 77191 37 100.0 35 ..................................... TTGTATAAAAGTTAGTATTAAAATAATCAATTTGC 77263 37 100.0 34 ..................................... ATCAATCTTGCCAAAATCAGTTGTTATTTCATTG 77334 37 100.0 35 ..................................... CTGTTTAATTTTAGGTAATTTATCATATAAATTAT 77406 37 100.0 35 ..................................... AACAAAATTTAAGTCTTTACTGTAATACACACCCT 77478 37 100.0 34 ..................................... TTTATTGGTAGTTTTGCAGGAATGCTGATATTAG 77549 37 100.0 34 ..................................... AACAATACGGCCTGTTTTATACTTAATATCCATA 77620 37 100.0 35 ..................................... AGAAAGGACAACCTGTTAGAGTAGAGGATGATAAA 77692 37 100.0 36 ..................................... TTCTTTTAACACAGCTGCGCAAACTAAACGAGCACA 77765 37 100.0 36 ..................................... TCGTCTAGTTTTACTGGCAATTTGCATATTTTCTCA 77838 37 100.0 35 ..................................... ATCATAGCACCCTTTTGGTAAATGACCGTTTTTAG 77910 37 100.0 35 ..................................... AAGATAGTGTGCAGACCGACCCGATGCAGCAGGCT 77982 37 100.0 34 ..................................... ATGACAAAAAATTACGAAGAAGTCCAGGACAGAA 78053 37 100.0 34 ..................................... TGCAGCTTCATTTATTTTAACTGGGTGCGATGAA 78124 37 100.0 34 ..................................... AATCAGCAGTCAAATCAGTATTAGACGAACGGAA 78195 37 100.0 35 ..................................... CAATAGGCTCTTCTATCCCTGTTCCATTTATTAAC 78267 37 100.0 34 ..................................... TTTTGTCAGGGACACACTAATTCCTAAATTAAAA 78338 37 100.0 36 ..................................... ATTTGTTACATAACCTCTGTAACCTATCGTTCTTTT 78411 37 100.0 35 ..................................... TTTTTACATTAAGATTAGATACGGCATAATCTAAG 78483 37 100.0 35 ..................................... ATCTATTCCCACCTCTCCAGGTTGTGAATATTCTT 78555 37 100.0 36 ..................................... TCACTGATCTCCATAGCAGCGGAAAATAATGACCAG 78628 37 100.0 33 ..................................... ATATGTTCTTTACTCTCCATTTTTAGCTTGCCA 78698 37 100.0 35 ..................................... AAAGCCTAAACTACACTCTTTCTTATTGCCGTTTA 78770 37 100.0 36 ..................................... AACTCATATAAAGCCCTAATCGCTGTTACTAATAGA 78843 37 100.0 34 ..................................... TTGCGAGCTTTTCTCCTGCCGTAAGAAGCATTAA 78914 37 100.0 34 ..................................... ATCTCTGCAGCAAAGGTATGTTTTTCACTGCGAG 78985 37 100.0 34 ..................................... AGTATCCGATACCTATGTTCGGGATATGGAGAAA 79056 37 100.0 34 ..................................... ATATAGTTGGGATAGCAAAAAACAAGAGGTTGGG 79127 37 100.0 33 ..................................... TGTAGATGGTATTTTGGATGTTACATCTACTAA 79197 37 100.0 36 ..................................... AAAAGATGCTACAGCCGAATTGAGAAAAGTATATAA 79270 37 100.0 35 ..................................... TCCTAAAAACCATCCATCTATTTTATCCTCCATGG 79342 37 100.0 34 ..................................... TTAATAATTGTCTTTCTGCCACTTCCGGATCATT 79413 37 100.0 34 ..................................... CACCTGTAGTTGCAGAATAACCAAATGTGCTAGA 79484 37 100.0 33 ..................................... CATATTAATGGATGTTCGCAAATGATACCTGAA 79554 37 100.0 35 ..................................... GGTTATTGCGTTGATAACAACCTTAAAAAGCCAAA 79626 37 100.0 34 ..................................... AGTTTCTTTTTTGATTAAGTCATACGGCTGTTTG 79697 37 100.0 35 ..................................... ACCTTGATTAATTCCCATATTAGTGAGATTATTAA 79769 37 100.0 33 ..................................... AACGGCACAACAGAGCTTGGTAGGCAGGAGAGG 79839 37 100.0 34 ..................................... AGATTATAGTTGGGCATATTAAAGGAAGGTGATT 79910 37 100.0 34 ..................................... TACCGGATTTATCGACAAATCCACTAACTCCTCT 79981 37 100.0 34 ..................................... GGAAACTACAATTACAGAAGTTGTGAGGATATAA 80052 37 100.0 34 ..................................... CTTATAATGCCAAAATGATTGCAACTGTAACGGG 80123 37 100.0 35 ..................................... AAATAATGATAATGAAAATATTTATAGTCCTTCTC 80195 37 100.0 34 ..................................... AAATCTATTTTTTGTCTGCTGATCAAGATCAGGA 80266 37 100.0 36 ..................................... AACCCAACTGTAGAATTGATATCAACACCAAGCTGA 80339 37 100.0 35 ..................................... TTTGATTCCATTTGAAATAGAAGTCTTACCATCTG 80411 37 100.0 34 ..................................... AATATCTAAATCCTTATCCTGCATAATTTTTTTA 80482 37 100.0 35 ..................................... TACCTGATTTATCGACAAATCCACTAACTCCTCTG 80554 37 100.0 34 ..................................... CCTGCTCTCAAGCATATCAACCGCCTTACTCAGT 80625 37 100.0 34 ..................................... TGCTCCATCTGGTCCTGATCTCTACCATTATTAT 80696 37 100.0 34 ..................................... TCGCCGTGTGCTAAATGGTCCGATAAGTACCAAT 80767 37 100.0 35 ..................................... CTCTACTCTATGTTGATCGTCAACTACACACTTAA 80839 37 100.0 34 ..................................... TAATAAACGATCTGTTCTATCTAAAAAGATTGAG 80910 37 100.0 33 ..................................... TGAAATCGGAGAAAGATATCCGACTACCCTGGA 80980 37 100.0 39 ..................................... AATTTTTTCTATAAGATTATTAACTTCTTTATCGGTCAT 81056 37 100.0 35 ..................................... GTGGTATTGCTATTGTTATAAACTTCTCTGCTGCC 81128 37 100.0 34 ..................................... GACCTCGTCCTCTTCATTTCCCCTGGCAAAATCA 81199 37 100.0 35 ..................................... ACCCAGTTTTTAATTTGTTTAATATTTTCCATTAT 81271 37 100.0 36 ..................................... TATAACTTTAGATTTTCTTGTAGGATTAGCTTCAAT 81344 37 100.0 36 ..................................... CTAATTGTTGTAATATTGTTCCGATCACAGGCTCAA 81417 37 100.0 34 ..................................... CAGACCATCTGGAGTTTTTGCCTCAAATATTTTT 81488 37 100.0 35 ..................................... TTTATCATTTAAAAAATTTTGATCGTCAAATAAAG 81560 37 100.0 35 ..................................... TTATATCACGTATCTCTGTAAAATCAGAAGTTTTA 81632 37 100.0 34 ..................................... AAGCTGGGCCTGTATCTTTTTACGGTTCTCATTA 81703 37 100.0 35 ..................................... AGTATGCTCTTACAGGTAAAAATAGACTTACAGAC 81775 37 100.0 35 ..................................... AGTTAAGTGCTACTCAACTGGATCTGGTTGCACAA 81847 37 100.0 34 ..................................... CAATCTCCTTGTACTCTTTTAGCTGCATATTTAA 81918 37 100.0 35 ..................................... AGTGAAGAAAGGAAGGTTATATATAAAGAAATGAT 81990 37 100.0 35 ..................................... CCATACCTTCCTGGGTCTTTACCTTCAAGTATAAA 82062 37 100.0 34 ..................................... ACATGTAGGGCGGTTAACTATTTCAATCTCTTTA 82133 37 100.0 35 ..................................... CTTCCATAGACCAATTTTTTGGCGGATTCAAAAGA 82205 37 100.0 35 ..................................... AAATTTATTAGCTGGTTTAACCGCTTTACAATTAA 82277 37 100.0 36 ..................................... ACCGCTACCTTTTTCCCCTTTAAACTCCCATTTAAT 82350 37 100.0 34 ..................................... ATACCTATCTGGTTCCCATCTGCGGCCAGCACTA 82421 37 100.0 34 ..................................... CTTATAACGCAAAAATGATTGCAACTGTGACCGG 82492 37 100.0 34 ..................................... CCAGTACCACTGAAAACCATCATCCACACCTTTT 82563 37 100.0 35 ..................................... AAGTATGGTAATCTTTTCCCTGAGCTTTCCGGCGC 82635 37 100.0 37 ..................................... CACTCTGGGATTATTATCGTAGAAAATACCTGATTTA 82709 37 100.0 35 ..................................... TAGCTTCGAGCTTGCTAATCAAGAAGGCAGGATAG 82781 37 100.0 35 ..................................... AAGCTAGCAACGCTGGACAAACAGGACAAAGTGGT 82853 37 100.0 34 ..................................... CTCTTTTTTGTCGTTTTCATCTACTTTTTCCTTA 82924 37 100.0 35 ..................................... CTGCTGGCTGGCTGGTATTACGTTAACTGTCTGTG 82996 37 100.0 34 ..................................... CTGCTGGAATAGTCTATATAATCAGTCAATGACA 83067 37 100.0 36 ..................................... TTTTACTAAATTCGGATTGTTTGCAATTTCTTTGAA 83140 37 100.0 35 ..................................... AAAATAAAGGCCTTCGTGGTTTTCCTCCACTCTAA 83212 37 100.0 34 ..................................... TTTATTTTTTATTTCAGTAATTGTCAATTCTTTT 83283 37 100.0 35 ..................................... TGCAGTATCATGATTGACAGTAACCTGATTGTTAA 83355 37 100.0 37 ..................................... ATCCTTGTGCCTGCCGGTATGTTTCTTTCACAACCAT 83429 37 100.0 38 ..................................... ACCCCTAAATACAATAAAATAATTTCAGACCATAATAA 83504 37 100.0 34 ..................................... TACAACGCAATGTATGAAGAATTAGATATGGGAT 83575 37 100.0 35 ..................................... CGGATAAATTATGGAAATTAAACAGAACTTCTAGA 83647 37 100.0 35 ..................................... TTGACACAATGGAAGAATTAACTGACAAGCCTGCT 83719 37 100.0 35 ..................................... TAAAATTATATTATCGCAACAAACTTGATAATGTA 83791 37 100.0 34 ..................................... GCCTAAACAGATGGAAAGCTGGTCGCTAGCAATG 83862 37 100.0 34 ..................................... CTTTATTATACACCATAAACCCCAAATTATCAAG 83933 37 100.0 34 ..................................... AATCAAGTAGTGATGAAGGTTTAAACTGGATAAC 84004 37 100.0 34 ..................................... TATCATATCTACCGCTTTCGATAGCTGCTGCAGG 84075 37 100.0 34 ..................................... GGGCAATATTATGTAGATGGACTTAATGAAGAAG 84146 37 100.0 35 ..................................... GGATCTTAAAGCTAATTCTTGCTGATCTTTGCAAT 84218 37 100.0 35 ..................................... AGCTAATTTTATGCCTTCATCGATTAATTTTTGTA 84290 37 100.0 33 ..................................... ATTTCTAATTAATTCTCTTTTAATATATCCAGC 84360 37 100.0 35 ..................................... AGCTAATTTTATGCCTTCATCGATTAATTTTTGTA 84432 37 100.0 33 ..................................... ATTTCTAATTAATTCTCTTTTAATATATCCAGC 84502 37 100.0 35 ..................................... AAATGATGGAAATTAACAAAAAATTAGCAGCTATG 84574 37 100.0 35 ..................................... AAATTGAGTAACAATAGTATTAGTAACTATATCAA 84646 37 100.0 34 ..................................... TCAGTATGATCAAGATGGATTATTCAGAGGAAGA 84717 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 172 37 100.0 35 ATTGCAGTCCCCTTCATTGGGGACTGAGAATTGAAAC # Left flank : TTATTTATCAGTAAAGGTGTGATAAAATTGATGTATGTTCTGGCATACGATATTTCAACTGAAAATGCTAAAGGTAGAAAAAGGTTGAGAAAAGTTGCTGAAACCTGTGAAAATTATGGACAAAGGGTTCAAAAATCAGTTTTTGAATTTCAATTAGATGATAAAAAATTTCTAATGATGAGAAATGAAGTATTGGAGTTAATGAACAAGAAAAAAGATAATATTAGGATCTATAAAATAATTGCTCCAAAAGATAATTATGTGGAAGAACATGGGAACTTTAAGTCTGTAGATTATGATAATGATACACTGTTAATTTAATTTGCGAAAGAGGAGTGTTTGTTAAATTACTGCCTCTCTCGCAAAAGATTATAAATACTAATGTAAGAAGCATTTAAAGGAGATGAGGTAAAATGATTTTATTTTTTGTGGAGGTGATAATAGATATTCGCAAAAAAACCTTTATGAATCTTAATTTAACAGGGCTAATTTAGCCTGCT # Right flank : CTAAATTTTGGCGAAGTGTTATAAGCAAATTAATTATTGCAGTCCCCTTCATTGGGGACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGAATTGCAGTCCCCTTCATTGGGGACTGAGAATTGAAACTAAATTTTGGCGAAGTGTTATAAGCAAATTAATTATTGCAGTCCCCTTCATTGGGGACTGAGAATTGAAACTTCCTGATCAGCTTGCTTCTGGACCTGTTTGCTTATTGATTGCAGTCCCCTTCATTGGGGACTGAGAATTGAAACCACCGTGAGTGGATAACTAAGAAAGATTTAAAGGAATTGCAGTCCCCTTCATTGGGGACTGAGAATTGAAACTTTAAGTTCCTTATAATATACTCAGGATTTCTGCATTGCAGTCCCCTTCATTGGGGACTGAGAATTGAAACTACAGCTTTTGCAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAGTCCCCTTCATTGGGGACTGAGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.60,-12.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 2 84912-86390 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPJN01000003.1 Halanaerobium sp. DL-01 Ga0256366_103, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 84912 37 100.0 34 ..................................... TAAATTTTGGCGAAGTGTTATAAGCAAATTAATT 84983 37 100.0 38 ..................................... TTCCTGATCAGCTTGCTTCTGGACCTGTTTGCTTATTG 85058 37 100.0 35 ..................................... CACCGTGAGTGGATAACTAAGAAAGATTTAAAGGA 85130 37 100.0 34 ..................................... TTTAAGTTCCTTATAATATACTCAGGATTTCTGC 85201 37 100.0 34 ..................................... TACAGCTTTTGCAATCCCATTTAATCATTATTTA 85272 37 100.0 35 ..................................... TGCTAATGAGGATATAACACATTTTGGCTGGATAG 85344 37 100.0 34 ..................................... TAAATTTTGGCGAAGTGTTATAAGCAAATTAATT 85415 37 100.0 38 ..................................... TTCCTGATCAGCTTGCTTCTGGACCTGTTTGCTTATTG 85490 37 100.0 35 ..................................... CACCGTGAGTGGATAACTAAGAAAGATTTAAAGGA 85562 37 100.0 34 ..................................... TTTAAGTTCCTTATAATATACTCAGGATTTCTGC 85633 37 100.0 34 ..................................... TACAGCTTTTGCAATCCCATTTAATCATTATTTA 85704 37 100.0 35 ..................................... TGCTAATGAGGATATAACACATTTTGGCTGGATAG 85776 37 100.0 35 ..................................... AGCCTTTTTTGTGATTGCCGAATAATCGGGCTTAT 85848 37 100.0 36 ..................................... TGCATCAGTTAAATCATCACGTCTTATAACTGGCAA 85921 37 100.0 37 ..................................... CCAGCCTGTGAGATGTATAACTCCTCCAACTCATCAC 85995 37 100.0 35 ..................................... CTAACTTGCCGGCTGATTTAATGTACAAAACTTTG 86067 37 100.0 35 ..................................... CTAACTTGCCGGCTGATTTAATGTACAAAACTTTG 86139 37 100.0 35 ..................................... CTAACTTGCCGGCTGATTTAATGTACAAAACTTTG 86211 37 100.0 34 ..................................... TGGCAGTGAGCTGGAGCTATCTTTAACGGCTGAT 86282 37 100.0 34 ..................................... AAGCTAGCAACGCTGGGCAAACAGGGCAAAATGG 86353 37 81.1 0 .....................TTA.....CAA....T | T [86373] ========== ====== ====== ====== ===================================== ====================================== ================== 21 37 99.1 35 ATTGCAGTCCCCTTCATTGGGGACTGAGAATTGAAAC # Left flank : TTCATCGATTAATTTTTGTAATTGCAGTCCCCTTCATTGGGGACTGAGAATTGAAACATTTCTAATTAATTCTCTTTTAATATATCCAGCATTGCAGTCCCCTTCATTGGGGACTGAGAATTGAAACAAATGATGGAAATTAACAAAAAATTAGCAGCTATGATTGCAGTCCCCTTCATTGGGGACTGAGAATTGAAACAAATTGAGTAACAATAGTATTAGTAACTATATCAAATTGCAGTCCCCTTCATTGGGGACTGAGAATTGAAACTCAGTATGATCAAGATGGATTATTCAGAGGAAGAATTGCAGTCCCCTTCATTGGGGACTGAGAATTGAAACTAAATTTTGGCGAAGTGTTATAAGCAAATTAATTATTGCAGTCCCCTTCATTGGGGACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGA # Right flank : TATTTCAGTAAGCAGGATATACTTTTCACCAGTAAATATTTAAAAGAACAGGGTATTCTCATACCCTGAAATTAATTATTGTTCATTATCAATTTTTTTATCTAAGTCTTTGAATAAAACATATAATGCTCTGGCAACTGTAATTCCATCAATTGGATTCATAACTGAAGTAAGTTTTTCTCTGTTGTAGGCTTCATTTTCAGGTTCGATTAGATGACATCCTGCTTCATAATCTGGCATACAGGCAAAAAAGCCCAGTGATGTTTTTCCGAAAATAACAGTAATACTAGAAAGGCTTTCGACTCTAATCTCAAAATAACTGCCATAATTTTTAAATTCAATTATCCTCCCCAGCCATTTCTGTTTCTGATAATAACAATTAAAAGTCATATTAAACAGCTCCCTAAGTATAGGAGATTTTTTCATTAACTTTTTTGAAAATATCGTCTGTAATAATAGATTTTTTGCTTTTGAAACTCTCAAGTAAAGCAACATAACAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAGTCCCCTTCATTGGGGACTGAGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.60,-12.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [5.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA //