Array 1 241422-240722 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGGW010000012.1 Klebsiella huaxiensis isolate SB6422, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 241421 29 96.6 32 .....T....................... CCAGTGTGAAAAATAACCCTCTGGCGTTATTA 241360 29 96.6 32 .....T....................... TGGAGACTTGTAATCGATGTCAAATTCCATAT 241299 29 96.6 32 .....T....................... GTTGAGGGGTTTTCAGCGGACCTGGCGCTCAA 241238 29 96.6 32 .....T....................... GCGGCGCGGCAGGCGTTCCAGATTTTCTGCGC 241177 29 96.6 32 .....T....................... CCAGTGGTGGTTGAAGGCGGTACGTCTCCATA 241116 29 100.0 32 ............................. TGTCCTGCCTGGGCCTGGTTGTCATCTGCACC 241055 29 100.0 32 ............................. ACAACTGATATCACCGAACTGGCGCAGCGTAT 240994 29 100.0 32 ............................. GTCGATATATTTGTGACCGGACAGGTATATGG 240933 29 100.0 32 ............................. TTGGCATTGGTGCTCGTCTGATTGATAACGAA 240872 29 100.0 32 ............................. TACAGGTCGCGCGCTGTATTGTTTCGCGCCTC 240811 29 100.0 32 ............................. AAGCCAGCTAAATCACGGAAGCGCGGCTTTGT 240750 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 12 29 98.6 32 ACGTTCCCCACGCGAGTGGGGATAAACCG # Left flank : GGCGAGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGTCTGGTCGGCGCGCTGGCAGAGAGTCATCGCCTGACGCTCAATACGCGCTATCAGGTTGATTATATTGAAACCCTTTATGGTCTGGTGCGCTCCCGGCTGGCGGTGGCGATTCTGCCTGCGCTTTATACCACCCATCTTCAGGATCCTGTTTTGAAGATTGCCCAGCTTCAGCAGCCTGCCTTAACGCGTACCGTTGCGCTGTTGCGCGGGCCACAGCCTTTGCCGCCGCTGATTGAAGCGTGTTTTGCTTTACTGTTAAGTTCACTGCGGGAAGTGAATCTGTAGAATGCCATGACCGCAGTTCATTTTGGTGAAATGCGAAAGAGCTAACGAAATACTTTATCGTATCTATTAAAATCAAAGGGTTATCTTTCTTTAATAAAATCAATTTGTTGCAAAAATGTCGGTAGATTGTTTTGTGTGAATAAATTTATTATAAAACAATAAGATATATTTAGT # Right flank : CAAATCAAACAAGGCGCCGTGTCGTCAGGGCGTTATTGCGCCATTCATCTCTTCCTGGCTGGCTTGCGTTGTCCGGTGACTTCCCGTAACCTGCCCGCTGAGAACGTTTTATCTCTCAATGACTCGGGGTGCCCTTCCTTGTGAAGGCTGAGAAAAACCCGTACCACCTGATCTGGATAATGCCAGCGTAGGGAAGTCAGAGACCGCAGGGTCGTCGCTTCTTCATCGCCTGGCGGGAGCAAACGATGTCTGACCTGCTAAACCCCGCTCATATTGCCCATCTGCGGCATCTTTTTCGCCGCCATTCCCCCCTTGTTCACTGCATGACTAACGACGTAGTGCAGACCTTTACCGCCAACGTTCTGCTGTCGATTGGCGCATCACCAGCGATGGTTATCGACCCCGATGAAGCCAGTCAGTTTGCCGCCATTGCCGACACGCTGCTGATTAACGTCGGCACGCTGACCGTAGAGCGCGCGATGGCGATGCGTGCGGCGGCG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACGTTCCCCACGCGAGTGGGGATAAACCG # Alternate repeat : ACGTTTCCCACGCGAGTGGGGATAAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGCGAGTGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 35728-34053 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGGW010000051.1 Klebsiella huaxiensis isolate SB6422, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 35727 29 100.0 32 ............................. ATGTTGGCTCTGCAGCAACAACCAGCTCACAG 35666 29 100.0 32 ............................. CCGTCACGCATCATAGAGTTTGCGGGCGGAAT 35605 29 100.0 32 ............................. GTGATAAAAGCGAGATGAATATGTGTAGTTAA 35544 29 100.0 32 ............................. GTGACTCGATGACCGCCCCAGCTGGATTAAGC 35483 29 100.0 32 ............................. CGTATGCGGCTTGATACCGGCTTTATCGGCCA 35422 29 100.0 32 ............................. CGAGAGGTCAAAACGAAACCAGCACCAGACCG 35361 29 100.0 32 ............................. CTCAGCGTTGTTTCGTCTGTGCTGATTGATGG 35300 29 100.0 32 ............................. GTAGCGGAATAACGCCACAGGCCAGGCTTAAT 35239 29 100.0 32 ............................. CATATTCCATAAAACCAACACGACTCCAGGCC 35178 29 100.0 32 ............................. TCCAAGATTCCTGCTACTGGGTACGGATCATC 35117 29 100.0 32 ............................. GGTGTAACAATGCTCGCCGCGAGCAATTCCTG 35056 29 100.0 32 ............................. CGCGCCAGCTTATCCCGTCTTGCCTCTCCCAC 34995 29 100.0 32 ............................. TTGATACATCAAAATTAACCCCGCTTTTTCCT 34934 29 100.0 32 ............................. CGCGCCAGCTTATCCCGTCTTGCCTCTCCCAC 34873 29 100.0 32 ............................. GCACTTGACCTCTGCAGAAGTGCGTTACTGCC 34812 29 100.0 32 ............................. TGCTATGCCAGTTCCCTCTTCGCTCTGCTGCA 34751 29 100.0 32 ............................. GTGAGATGGTTGGACTTGCGCAGGTTGCGTTA 34690 29 100.0 32 ............................. GTTACGCTGCTCAGTTAGATAGGCTTTACGCT 34629 29 100.0 32 ............................. CTGGTCACCGCATTACAGGGCGATACCGTTGA 34568 29 100.0 32 ............................. GGCTTGTCGTTATCGGCCAGCGCCGATTCTGT 34507 29 100.0 32 ............................. GGTATACAGCAGGCCAAATCTGCGATCATGGG 34446 29 100.0 32 ............................. CTCACCCGCGTTCGCTCGTTTAGTTTCCTGCG 34385 29 100.0 32 ............................. ACTGTTTTGCGGGTTTTCGGTTATCTGTTTAC 34324 29 100.0 32 ............................. CAGTCTGCGATCTCAACACGCTGAAACTGGAA 34263 29 100.0 32 ............................. GTGACATTCTGGCGGATAATCTGACCTGCATT 34202 29 100.0 32 ............................. CTGATGGCGTCAGCTAAGCCGGAGTTGCTGAA 34141 29 100.0 32 ............................. GGGAGGGTCATGTAATAGGGCCATTTCCATCA 34080 28 79.3 0 .............A.-..A...C..T..C | ========== ====== ====== ====== ============================= ================================ ================== 28 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTTGCTGCCGGAGAGATTGAACCGCCTCAGCCTGCGCCGGATATGCTGCCGCCAGCGATACCGGAGCCTGAATCACTGGGGGATAGCGGTCATCGGGGGCATGGTTAATGAGTATGGTGGTTGTGGTTACGGAAAATGTACCGCCGCGTCTGCGGGGCCGCCTTGCCGTCTGGTTACTGGAGATTCGAGCTGGTGTGTATGTCGGTGATATCTCAAAACGTGTACGGGAGATGATCTGGCAGCAAATTACACAACTGGCAGGCGTCGGAAACGCTGTGATGGCTTGGGCTACGAATACAGAGTCCGGTTTTGAATTCCAAACTTGGGGGGAAAATCGACGTATTCCGGTAGATTTGGATGGACTGCGATTGGTTTCTTTTCTTCCCGTTGAAAATCAGTAAGTTACACGTTCTTTAATAAAGAGGAATTGTTGATTATAAGTTGGTAGATTGTTTCTTGCTAAAAATTGTAATATAAAACAGATAGATATGTTTAGT # Right flank : GACTCATAACCCTCAATCTAATGGCTGTCGTGAATCTGTAAGTTCAATTCTTGAGCCAATTAGAAACGATCCTGGGATGAGATAAGCGTGTCGATAAAGGCTTTCTTATGCGGATATTTCAATACGTCATCGATATACATTATGCCTGTCTGAAATGTTGTAAAAGCCTCGGTGATATCCAGCGCGACTAATCCTCGTCCCTGGGCTTCCTGTTTCAGTTGCAGGGGAAGCGCCAGTAAACAGCAGTTTTGCTTCGCAAGCGCAATCGCGGTAGAAACCGAATACACCTCAAATCGAACCAGCTCAGGCGCGATAGTACATAGCAGGGGGTCATCGGTTCCTCCTTCTTCATATTCATGTTTCAGCACAATCCAGTTGTACTCATTGAGTTGCGCGGTACCGATGCGTAGGGCCCCGGTCAGAGGATGTTCTGGCGCGCAAAAAAGCATGAAACGAGTGGAAAATATAGGTAAATAATGAATAGAAGATATCCGCGCTTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 63197-62251 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGGW010000051.1 Klebsiella huaxiensis isolate SB6422, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 63196 29 100.0 33 ............................. AATACTCTCGCATCTATCCAGGAACTAGCCCGG 63134 29 89.7 32 T.TA......................... GGCGGTTTCGAGCTGAAATTGTGGCGTACTGG 63073 29 100.0 32 ............................. ACGCGGATCGTTATCGTTAGGCTTGAAATGGT 63012 29 100.0 32 ............................. ACACCGGTTCTGCGTCGAACGCCTCCTGGTAC 62951 29 100.0 32 ............................. CGCCTTAACCTACCCGCATATTAAGTGAATTC 62890 29 96.6 33 ............................T GGTTGATGCTGATGCTAACGATTTGCTGGTTGA 62828 29 100.0 32 ............................. GCAAAATCTCCGATGAGTACAACGATGTTCTG 62767 29 96.6 32 ............T................ GCCACGCATCGACGCCGTTGAGAGCTAAAAGA 62706 29 100.0 32 ............................. CGACACCTTTTACGATACGTATAAATTCACTC 62645 29 100.0 32 ............................. CTTGCTGAAGAGGGGAAATTAACGGCAGAAAC 62584 29 100.0 32 ............................. TTTTATAGGCGGTTGGATCTGACTCTGACTGG 62523 29 100.0 32 ............................. ATTGCTCGCCAACCAGTCAGTCAGCTTGCGCC 62462 29 100.0 32 ............................. TCACTGAACATGAAAGTGGCGCACCCGGTGCA 62401 29 100.0 32 ............................. TTTACCGAAATGGGCGGGCCTGGACGGGGCAA 62340 29 100.0 32 ............................. GCAGCACTTCTGTAGTTAGAGGGGACTGGAGG 62279 29 86.2 0 ...........AT.............A.T | ========== ====== ====== ====== ============================= ================================= ================== 16 29 98.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : ATGTATCCATTTGTATCATAATGATATGTAAGTCTTTTTATTTTTATGGTTTTTATTTCTATTGCTGTGTTTTTAATGTTTTGTTACATCAAAAATTAAATTAGAATAAATTTGTTGCCAACGTAAGTATTACTCAGCTAATTAATGTTCGATTTAATCATGCAGCGCATTTAACATATTTCTACGGTATTGCCTTAAATGTTTGAGTACAGTATGCCAATGTTTCTTCTGGAAGGAACATACTGACTTTGTGGGGAGCTCTTTGGTAGTTCGGAGTGTTTTTCATAACTATTGTTGTTATCCGATGATGTGCAGAAGTTTCAGCGCTGGTACAGAAATCACACCATTTTGGTAAACTTCAAGTGAATATAAGCCTCTGCTTTTTTATCATTTAAAATCATGTGGTTGTATGCTCTTTAATAATGCATATTTGTAATGATTACGTTGGTGGAATGTTGCCTCGTAAAAAAGAGTATTATAAACAAGGGAATATATTTAGA # Right flank : GCACGTGCCGACCATAAACTTATATAGCCTGGGATGGTGGGCTGAAAAATGAACAATAGATAAGATGTAGCTACCAGCGCCCGGACGCGCCGCCGCAACCCGATGACCCGCCGCCGCCGCGAAAACTATTGCGCGATGTACGGCTTGACCGAACGTTATTACGCCCCGATGAGCTGCCGTCTTTTTGCTCTTCCGACGTGTTTGATGTCCGGACTCTTTTCCTGAAGGCTTTTCCGGCGGCGGTCGGCGTCAGCATAAGAATCAAAAACACGATAAACGGCGTGGCGAAACCAAGCAGGGTGAATAGTTTCTCCCAGCCCGCCGCGTGGCCTGAAATGGGCAGCGCAAATGTAAGGACTATGGCTGTCAGACAAATTAGTCCCAGGGTTTTGAGGCCACCTTTTATGGCGATGCTCAGCAACACCACGGTCCAAATGAGCAGCGGCCAGCTCCATTGAGTTATTGCTCCGTCAACAAATATTAAGCATGGTTGATTATGA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //