Array 1 120267-117193 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMDQ01000001.1 Flavobacterium sp. LC2016-13 Contig01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 120266 46 100.0 29 .............................................. CAACAACACGGTACGTTAAATACACAGGA 120191 46 100.0 30 .............................................. AACATAAATAAAGAAGAAAGATACGTGCTA 120115 46 100.0 30 .............................................. CAGTAACATATAACTAAAATGGCATACGTA 120039 46 100.0 29 .............................................. CGGGCAAATGAAGATCAAAGTTTCTTATA 119964 46 100.0 30 .............................................. AATTTCTATTTTGATTCATAAGAAAACTGG 119888 46 100.0 30 .............................................. TCTGCGATTCTTTGTGCGCTGGCATCGGCT 119812 46 100.0 30 .............................................. GAGGATCTATGTGAGGCATTTTCTTTCCGA 119736 46 100.0 30 .............................................. AACACAAAACAACTTAAATGTTTGGACTTA 119660 46 100.0 30 .............................................. ATGCCATTAGTTTTATTAACCAAGTCAACA 119584 46 100.0 30 .............................................. GGACGTCTGTTGCTATCCTGTCAGATTCAG 119508 46 100.0 29 .............................................. GTGTGCAGTTGATCCACTGCGAGGCGCTG 119433 46 100.0 30 .............................................. TCAAGCTTTGCATAGTTCAATATCGGTACT 119357 46 100.0 30 .............................................. TACTCTTATAAACTCTGAAACTTGCCATTG 119281 46 100.0 29 .............................................. CATGAAGCCGACATTGTTTTGGAACTTTA 119206 46 100.0 30 .............................................. CAGAAGAGGGGTTAATGCTTGCTCCTTATA 119130 46 100.0 29 .............................................. AATTTAGTGATTATAATTGGCGATTGTAA 119055 46 100.0 30 .............................................. TAATGCTAAAATAAAACCTTTCTATGTTAT 118979 46 100.0 30 .............................................. CTTCAAGGAGTTGATTCATTAAAGCAGTAC 118903 46 100.0 30 .............................................. AAAGGTCTAACAAAAGAAGACCACGGCCAA 118827 46 100.0 30 .............................................. TATATTGCTACATTAGCTCAGGCAGCACTT 118751 46 100.0 30 .............................................. GTTAGTATGGGAGATGAAAACAACCAAGCT 118675 46 100.0 29 .............................................. AACCGGAAGAAAATAAAGCAAATTCAAGT 118600 46 100.0 29 .............................................. AAGAATTACCTCCTGTTGAATTTTGGTAA 118525 46 100.0 30 .............................................. GGATTTGAAATGAGAGTAGATGGAAATGTT 118449 46 100.0 30 .............................................. GTTAATCCTGTTACATTAGATCCTGATATA 118373 46 100.0 30 .............................................. AAAGAATTAGTTTTAAAATTGAAACCAGCA 118297 46 100.0 30 .............................................. CAAAAATTAAATACTGAATTGACTAAAATA 118221 46 100.0 30 .............................................. TAAATAATATAGCACGAATTGGAAGATTCA 118145 46 100.0 30 .............................................. ATTCTATCTGAAATATCTTTTTCAATTACA 118069 46 100.0 29 .............................................. CTGTAAAAATTAAGGCTTCATTGAAATGT 117994 46 100.0 29 .............................................. GAGAACGGAGGTAAACTTGTCTATGGCCA 117919 46 100.0 29 .............................................. AGCTGTGAATAGAGCTGTGAATCGAGCTG 117844 46 100.0 30 .............................................. GACGAACCACTCATTGTATAAGCGGAATCA 117768 46 100.0 30 .............................................. TTTTTGATTCAATTTTTAATTCATCATTCA 117692 46 100.0 30 .............................................. CATGTGAATGGCAGTTTATAAGATCACCAG 117616 46 100.0 30 .............................................. AAATCTGAAGCTTTACTTATTTGCGAACAG 117540 46 100.0 29 .............................................. TACAGTTTACGCGACGTCTCCTACAGCTG 117465 46 100.0 30 .............................................. TTTCTCAAAATCTACTTTCATTATCTTTGG 117389 46 100.0 29 .............................................. TCTTCGTGAAAGATCTATTCACGGCTATA 117314 46 100.0 30 .............................................. ATTCACCCTGCAACTGATTTAATAATTTCA 117238 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 41 46 100.0 30 GTTGTGAATTGCTTTCAAAATTGTATTTTTACTTATAATTCCCAAC # Left flank : TTATCAGTAAAGGAAAAACTTATGAAGTAGATGAAATGTGTACTTATATCAGACACAAACGAATTTTTATTTGGCTGGTTTATGCTCTGGAAAAGAATTCTAAAAATGTTGTGAGCTTTAATGTTGGCAAACGAACTAATAAAACATTAAATCGTGTTCTGGATACTTTAAAATTATCAGAAGCGAAAAAGATATTTACCGACAGATTAAAAAACTATAGATATCTAATTGATGACAAATTACATTCAGTAAAACGCTTTGGTACAAATCATATTGAAAGGAAGAATCTAACACTAAGAACTCATCTCAAAAAATTGAATCGTCGAACAATTTGTTTTAGTAAAAGTCTAAAATTCTAGTTTCAATTTTAAAGATTTACTTTTGGATTTGAGTAATTAAATAGTAAGTTTATCCTAAATCCGAATCTTTAGTAAAAGGAACAAATCGTATTTTTACTTATAATTTCCAACATTTAAACAATGAACGCAAAGCTTCTGATC # Right flank : ATACCGCGAGTTAATCGTTTGATATGTTGTGAGTTATGAGTTGGTTTTGAAATGTAAAAATTGCCTTGTTTGAGTGCTGAGAAAGAGTTGGTTAAGTATTTTTTTAATCCTGTTTTTTAGAAAAGCTCTAATTGTTGAGATGGTTTCTCTGGTTCTACAGGTTTTTTGCCATAAAATAGTTCCATCATTCCAAATTGTTTATCGGTAATTTGCATCACACCAATTTTACCATGTTCAGGAAGACTGTTTTTTATTCTTTTAGAATGTACCTCGGCATTTTCTCGGCTCGCACAAAAGCGCATATAAATGGAAAATTGAAACATAGAAAAGCCATCATCTAATAATTTCTTACGAAATGTACTAGCAATTTTACGCTCTTTTCGCGTTTCAGTGGGCAGATCAAAAAAGACTAATATCCACAAACTTCTATATTGATTTAAACGTGTATAATGCTCGTCATACATAAACTGGGTATAAAATTCTTCTCGAACTTCCTTCAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTTACTTATAATTCCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTCCCAAC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.60,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //