Array 1 248246-251990 **** Predicted by CRISPRDetect 2.4 *** >NZ_UJHN01000005.1 Klebsiella pneumoniae strain EuSCAPE_UK040, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 248246 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 248305 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 248366 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 248427 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 248488 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 248549 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 248610 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 248671 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 248732 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 248793 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 248854 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 248915 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 248976 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 249037 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 249098 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 249159 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 249220 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 249281 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 249342 29 100.0 32 ............................. GACCTGTCATGACGGAAATAGCGGTTATAAAC 249403 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 249464 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 249525 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 249586 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 249647 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 249708 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 249769 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 249830 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 249891 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 249952 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 250013 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 250074 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 250135 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 250196 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 250257 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 250318 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 250379 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 250440 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 250501 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 250562 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 250623 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 250684 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 250745 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 250806 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 250867 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 250928 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 250989 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 251050 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 251111 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 251172 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 251233 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 251294 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 251355 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 251416 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 251477 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 251538 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 251599 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 251660 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 251721 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 251782 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 251843 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 251904 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 251962 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 62 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //