Array 1 183217-180567 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGTOS010000004.1 Klebsiella pneumoniae strain Kp40LS Kp40_c4_length_432192_cov_17.657521, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 183216 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 183155 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 183094 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 183033 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 182971 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 182910 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 182849 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 182788 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 182727 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 182666 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 182605 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 182544 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 182483 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 182422 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 182361 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 182300 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 182239 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 182178 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 182117 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 182056 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 181995 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 181934 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 181873 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 181812 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 181751 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 181690 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 181629 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 181568 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 181507 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 181446 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 181385 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 181324 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 181263 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 181202 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 181141 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 181080 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 181019 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 180958 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 180897 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 180836 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 180775 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 180714 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 180653 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 180595 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //