Array 1 46886-48348 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJWI01000011.1 Halolactibacillus halophilus strain NBRC 100868 sequence011, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 46886 36 100.0 35 .................................... TCTAGGTTTAAGTTCTCGATTTTAAATGTTCTCAT 46957 36 100.0 37 .................................... CTTCAAACCGTCTTAGATCTCTTAGTTGTTTTCTGTA 47030 36 100.0 36 .................................... ATCTAAACGTCTTATCTTAGCTAAGTTTAGTTTTCT 47102 36 100.0 34 .................................... CCCTTGCTGATTTACTCTCATAAATTCGTGAATG 47172 36 100.0 35 .................................... CGTTTTTGTACATCTCTATCATTGTTTTAATTTTG 47243 36 100.0 34 .................................... TAGTCCACGGCTCCCGCAATCAAATTCCCCGTCA 47313 36 100.0 35 .................................... CCCGTCCATTCTTGCTCCGATTGACCAGACACAAG 47384 36 100.0 34 .................................... AACGTCGCTAGTGATCTGATTTAATTTCACATAC 47454 36 100.0 34 .................................... TAGTTTCATTACAAAGTGTGCTCCCTCCAACATC 47524 36 100.0 35 .................................... ATTTTCAACATCTCCTCTGTTTTTGTTTTATTGCC 47595 36 100.0 38 .................................... AAGTCACTTCTTTTGTCATAAGTTTTCTCATTTGTTTC 47669 36 100.0 35 .................................... CTGCAAGGTAGTTTATATATCCCCTCATGTTGTCC 47740 36 100.0 35 .................................... GATCGATGTCGTTGCAACTATCTAATCTTGTTTTT 47811 36 100.0 38 .................................... TTGATTTTGTAAATGTCGCGATAGCCTACCGCACCTAA 47885 36 100.0 35 .................................... TTAACATGATTCCATCTCCTTTTAGTTTGCTAGGC 47956 36 100.0 39 .................................... ACCTAAGTAAAAGTCTTTTACCTCGTCAAAGGTCATAAC 48031 36 100.0 35 .................................... TGTAACACCCCGGTACAAAATACATGCTTGTGCGG 48102 36 100.0 34 .................................... TCCACTGCCTTAAGAGCTAGTGGCATGTTTCTGT 48172 36 100.0 35 .................................... ATGTTACTTCTTTCGACATAATTTTTCTCATTTGT 48243 36 100.0 35 .................................... CATCATCTTTTATCATGCCCACATCTTACAATCGT 48314 35 83.3 0 ...............T........-....GC.A..G | ========== ====== ====== ====== ==================================== ======================================= ================== 21 36 99.2 35 AATCGATACCTATACCCCGATTAAGGGGACGAGAAC # Left flank : ATAGCTTGTCTTGAAAACAAAAGTTCGGCTCCATTGAAACTCCCTCGTTATATTGAAATGGGGCGATAACAATGATGCTTCTTGTATGTTTTGACTTACCAAGAGAAACTAAGAAAGAACGTAGACAAGCGGCTAAGTATCGTAAGCGTTTAGTTGAACTAGGTTTTTCAATGAAGCAATTTAGTTTGTATGAAAGAGAAGTTAAACAACAAGCAACGAGAGAACGCGTAATAGAAGTTCTTAAAGAAGAACTACCAGATACAGGTGCTATTACTCTTTATTTATTGCCAGATGATGTAAATGATAATCAAATAACCATCTTGGGTGATAAAGCAGTTAATAAGACATTTCGTCAGCCACGATTAAGATTCTTTTAAAATTCGGTCAAAAAACGGGCAGAGACCATATAAAGTTAGCACCTCATGCCTGTTTTTTGACCGATAAATAAACTTGTGAAATATTGATTTATCAACGCTTTCAGCTTTTTTATCACAAGCTCC # Right flank : GCTGTTTTGATGATAATTTAAATCTCAATATTTCATGATCTATTTTGATTGAATCAATAATTTAAAAGGGGCTGTTAATTCAATTGACAACCATTTTCTCTTGGGATTGAAGTGATTGTCACAAACTATGGACTTAATGGTGGCACTTGCTATTGATTAGAAAAAAACTAAGTAGACCAAGTACTATCAGCACTTGCGTTTGATTGTACGAGTGGAGGTGGGCCTGCTAATAATTTTGGGGACAAATTTAATTGTTGACAGATAGACATTTATAAAACAAAATTTTTGAAAAAAAACCAAGAAAAACCTTATTAAATAGAGGTTTTTCTTGGTTCTTTTAGTTTTAAAAAAGCTGATAAGTTCTGGTTTGTTGTGTTTATAATTATATCATTAGTAGTTTAGGGTATTAAACATACGTATAAGTATGCTACTTTATAATGAAACGATAGTAGATATTTAAAAAACCTCAAAGACATCAGTGCTAAAGAGGTTTTGGTGTG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATCGATACCTATACCCCGATTAAGGGGACGAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.90,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //