Array 1 87424-89829 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLCD01000007.1 Klebsiella pneumoniae strain k1279, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 87424 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 87485 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 87546 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 87607 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 87669 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 87730 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 87791 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 87852 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 87913 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 87974 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 88035 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 88096 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 88157 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 88218 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 88279 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 88340 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 88401 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 88462 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 88523 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 88584 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 88645 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 88706 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 88767 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 88828 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 88889 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 88950 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 89011 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 89072 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 89133 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 89194 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 89255 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 89316 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 89377 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 89438 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 89499 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 89560 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 89621 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 89682 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 89743 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 89801 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 40 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //