Array 1 1019473-1031294 **** Predicted by CRISPRDetect 2.4 *** >NC_009718.1 Fervidobacterium nodosum Rt17-B1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================ ================== 1019473 30 100.0 37 .............................. GAAGAACAACTTAAGCAGTTTTTCACCAGATAGCAGG 1019540 30 100.0 38 .............................. AATTGAAATCCAGACGGATAACCCTTAGATTTGACCCA 1019608 30 100.0 35 .............................. CGTGCATATGGTGTTGATTCGAGAAAGATTTTTGC 1019673 30 100.0 37 .............................. GTGGATGTGGCTTATCTTCGTCAAATGGATGTTTTTC 1019740 30 100.0 35 .............................. TTGACAAACACAAGCTTGAGGCACCATACTATTTA 1019805 30 100.0 36 .............................. GAAGTTGCTCAAGTTCACCCTGATAATTTTTGAATA 1019871 30 100.0 35 .............................. GCAAAATGCACTGTTTTTTACACACGCGCTTCGAC 1019936 30 100.0 39 .............................. GAAGCAATACTGATTTTTCAATTACTGGCTCTTTAGCCG 1020005 30 100.0 37 .............................. ATGGCAATAGGTAATCAGCTCTACAACTGGAACCTCG 1020072 30 100.0 35 .............................. AAGTATGAAGACGAAGACGCTGGTTAATGGTGTTG 1020137 30 100.0 35 .............................. TTATACCCGCCGTTGTAGTTCTTTTGGTATCCTTG 1020202 30 100.0 37 .............................. CCAATCATCGGACACGCAGATGGAATAGTCTTCGTAG 1020269 30 100.0 38 .............................. TGAGCTTGCAAGACTCACAGCCCAAGCAAACAATACAC 1020337 30 100.0 38 .............................. TACCACCAAACGCGGTATACGTCTTGGTCTAAAAATTT 1020405 30 100.0 35 .............................. GGTGCTATCTTTTTAAATCCATACAGCAATTTTGC 1020470 30 100.0 37 .............................. ATTTTTACCTCCTTCAGAACCTCTGTTTCTGATTCTG 1020537 30 100.0 35 .............................. TATTTTTCTAAAAACTGCAACAAAGCACCAACTTC 1020602 30 100.0 35 .............................. CCAGCTCATATTCTTGTTCTTCATCGGCTCTCTGA 1020667 30 100.0 37 .............................. GCTGGTTCGTGAAGTTTGCCATTAACAATGGTTCTTT 1020734 30 100.0 35 .............................. GTGCTCACCATGGTAATTCTCCTCGGGGTGACACC 1020799 30 100.0 34 .............................. TAATAAAATTCTAAGCCAAAATCTGTGTTGTTGT 1020863 30 100.0 37 .............................. AGAGGCTTGACGAACTTCTTACTTCTGATACTAAACA 1020930 30 100.0 34 .............................. CAAAAAAAGCTAATTGACAAAAACAGAAGTTGTG 1020994 30 100.0 35 .............................. GAAGCATCGTCTATGAGCTTGAAACACTTTCGTTG 1021059 30 100.0 36 .............................. AATCTATAGCAAACCACATAGAATCGCAGCCGTAAT 1021125 30 100.0 35 .............................. CGCAGCTTCTCTTCTCTTGTCTTGAGTGCCTGTGT 1021190 30 100.0 35 .............................. CAGGTGTGTCTTAACTCAAACTCTTCGTCGTTTGA 1021255 30 100.0 39 .............................. TTCGAAACACTTTTGGTGCTACTTGCTCTGTTGGACAAC 1021324 30 100.0 35 .............................. TTCTGCAAGTAAAAGTTTAGAAGTTGCTCAAGTTC 1021389 30 100.0 37 .............................. TCGATAGCGTAGGCTTGGCTGCAGGTGGTGGGATTGA 1021456 30 100.0 35 .............................. ATTTTAGTATTGAACTCATGAGGTTAGAAGGTGAG 1021521 30 100.0 38 .............................. CCAACGCTAACGCGAGTTGCCCCTCCCCGCGTTTGAAT 1021589 30 100.0 36 .............................. GGATTGCTGACGTGCTCACAAAAGGTGCTTTTTCTG 1021655 30 100.0 34 .............................. AAAGCTCTAACAGAACTCTATAAAGCAGCTACAA 1021719 30 100.0 38 .............................. CATGCAGAAAGGAGAGTGAGGGGAATGAGATTGCCAGA 1021787 30 100.0 35 .............................. AAAAAAATTTACATCAGCGTAATCAAATTTTGTGA 1021852 30 100.0 38 .............................. CAACTGTAGCTGGTGGTCTAAAGGTTTGGCGTTCATTG 1021920 30 100.0 36 .............................. TTCTGCTTATGGTGCAGAGTATTTTGATGGGGTATC 1021986 30 100.0 38 .............................. AGAAAAGAAAATTCGTTAAGCCAGCCAGGAGGCTGGGA 1022054 30 100.0 35 .............................. CAGAGAGAAAAGTATTTCAAAGGAGGTGTTTGTAT 1022119 30 100.0 36 .............................. ACGACGTCAACACCAGAGAATGAAAGAAGAATCATT 1022185 30 100.0 35 .............................. TATGAAGCTGGTGAAAATTCATTGTTAACTTTACG 1022250 30 100.0 37 .............................. TACGGTTCTCTCGTGATATCCAAGACGATAAAAACTG 1022317 30 100.0 38 .............................. AGTTGTGTTGCTTCAAAATCTCAACTAGTCTGTCTTCA 1022385 30 100.0 36 .............................. ATTGTTTCGCTGGGGGAGGGGTCCCAGCACACGCTG 1022451 30 100.0 37 .............................. CGCACAAGTTCAGTACTTCATCTCGCGTCATGTATTC 1022518 30 100.0 36 .............................. TGGATATTTTTGTGTCTGGCTTGGCTGCACTCTTTG 1022584 30 100.0 38 .............................. TTCTCCCATCGTATGTTTTCAGAGAGAGGATATGCTTA 1022652 30 100.0 35 .............................. TTAAATTGGAAGACAAGCAAAACATCCTTTTTAAA 1022717 30 100.0 39 .............................. AAAAGACAAATAAAGCCAAGCGTCGAGCCATACTTTCTG 1022786 30 100.0 35 .............................. GATGTTCGCTGGGGGAGGGGTCCCAGCGTATGCTG 1022851 30 100.0 35 .............................. TTGTCAATATATATAAGTGCATCAAACCCACGAAG 1022916 30 100.0 36 .............................. ACTTTCGGGGTATATATCCCAGTATGCACCTACACT 1022982 30 100.0 36 .............................. ATTGTTTTGGGATTTTCAAGTGTGTTTTTTGCTGTG 1023048 30 100.0 36 .............................. GAACAAAACCAATGTCAACGAATCTCGCAATTTTCA 1023114 30 100.0 37 .............................. TTTAATCAAACCCACGATCAAACCCACGCAGTATCTG 1023181 30 100.0 34 .............................. GTGGATGCGTACAACGTTTTGATTGCGAATGGCT 1023245 30 100.0 34 .............................. GAAATAATATCGACTGAAACGCCATGCATTGTAG 1023309 30 100.0 35 .............................. CAACGATTGTTACGCCTATGATGATTGCTGCGACG 1023374 30 100.0 37 .............................. TTAAGCCGGCCAGGAGGCTTGGAGACAGAGTCTCCGG 1023441 30 100.0 36 .............................. TGGTAATAAAATGTTTTGTTAATGTCGGACGTCTTA 1023507 30 100.0 35 .............................. CCCATGCTAGCGAATTTGAGCCGTATATGGTTGAA 1023572 30 100.0 37 .............................. GTATCAGACGAAACAGATAACCAGCAAGCAGTACTTG 1023639 30 100.0 35 .............................. GACAGCAGTATTTCTAACAACTTGAAGCGATATAC 1023704 30 100.0 39 .............................. TGGATGAGTACTGGAAATTCCAGTGCGATATGCCAGAAG 1023773 30 100.0 34 .............................. AGAATGTTCACATCGTCTTGCTCTTTCTGGAAAA 1023837 30 100.0 36 .............................. CTCTTTCTGGAAAAATTCTTTATACAGCCAATGTCT 1023903 30 100.0 35 .............................. TCCAGAAAGTCTAACACTTTCGAAATTTCATTTTC 1023968 30 100.0 37 .............................. GTCTTTGGGACCGGGGGTATTCTTTGTATTCGAAATA 1024035 30 100.0 37 .............................. TCGATAGCGTAGGCTTGGCTGCAGGTGGTGGGATTGA 1024102 30 100.0 37 .............................. GGGAACCACTCCGCAAGAAATTCAGCAGTTCCCCAAC 1024169 30 100.0 37 .............................. GCGTTTTGCAAGGTGCGATTGGTACTGTACTTTCTGT 1024236 30 100.0 35 .............................. AAAGATATACATTTTTTTTGTGACTTGTGGGACGA 1024301 30 100.0 35 .............................. TTCGACGAGGTGCGAAGAGAAATCGAGCTCCGGAA 1024366 30 100.0 38 .............................. ATGGAACGAATAATGGAATATAAGGGTCACGTATATTT 1024434 30 100.0 37 .............................. TTATGTGTGTCACATTTGGCTAGGTATATCAAACATA 1024501 30 100.0 34 .............................. TTGACTTTGTTACAACTACTGGTATTTTCGAAAA 1024565 30 100.0 37 .............................. CCATCTTCACCTAGTTTAACAATCTCAACAGACATCT 1024632 30 100.0 44 .............................. ACTACTTCTGTTCTGCCAAAGTATTGCGGATAGCGCCTTTCCAA 1024706 30 100.0 35 .............................. CAAAAAAGGGTAGAATTCACTATCACGTGATTCTG 1024771 30 100.0 38 .............................. CTTGATAATTCCTTTATCCCGGGCAGTTCATGATAACC 1024839 30 100.0 35 .............................. GTTGTTTTCGCTGGGGGAGGGGTCCCGCTGGGAGG 1024904 30 100.0 38 .............................. TAAAGTGGTTCAAAACAATGTCTATGAACTAATTCATG 1024972 30 100.0 36 .............................. CGTATTCTGGAGCTAGCTATCAGGGAAGTACAAACA 1025038 30 100.0 36 .............................. TAGGGTTGAATAATTGAATAATTGAGTAATTGCCCA 1025104 30 100.0 35 .............................. TTTTTTTGCCACTGGTAAAGGCTTTTCAACTAGCT 1025169 30 100.0 37 .............................. CCCTCTTTTCTATTTCTTCATTCGCTCCCAACTTTAC 1025236 30 100.0 37 .............................. GATTTGTGATGTTTATTGTTAATTCCATACTTGCAAT 1025303 30 100.0 36 .............................. GGCGATCGAGTTCCTCCGACGACAAGTCGGAAAGTA 1025369 30 100.0 37 .............................. AAGTGAAGATGAAAAAGTAAATATTTTTTGCTCTGCC 1025436 30 100.0 36 .............................. GCGAAAGATTCTACTATCACGGTGACTTTTACGCGT 1025502 30 100.0 35 .............................. GTGGGACGACTGATAACTTGAATAGTCGTGCCATA 1025567 30 100.0 37 .............................. ATAATCCAATTAACAATAAATGCGGACCAGAACGCTG 1025634 30 100.0 37 .............................. GTGAATACTGCAGTTGATTTGTCAGCGCTCTTTTCCC 1025701 30 100.0 37 .............................. CTTTGCGAAAATGTTACAAAAATTGAGTTTCAATCCC 1025768 30 100.0 34 .............................. CATATGCGATTCTTAGATTTGTGATGTTTATTGT 1025832 30 100.0 36 .............................. TTTTGCTTTTGTTAAAAAAAAGAAAAGAAAAGAAAA 1025898 30 100.0 36 .............................. GAGATAAGTATTGTTGGGGTGTGCTTCGTTGGTCGT 1025964 30 100.0 37 .............................. GCTTGATTCAAACCATTAGAAATAGTATTAGAAATAT 1026031 30 100.0 36 .............................. TATTGAATGGTTGTGACTACCAAGGCACGACCAACG 1026097 30 100.0 35 .............................. TATTGTGTCATTTGACGAATGGAAGTGATATTTTG 1026162 30 100.0 40 .............................. AGAAAATGAAGTTCGTAAAGCCAGCCAGGAGGCTTGGAGA 1026232 30 100.0 37 .............................. AAAGAAAAAATATAAGAAAAATGGAGGTGTGAATATA 1026299 30 100.0 37 .............................. CTTCTATATCGTCGAAGGTAAAAACTCTGTGTACAGA 1026366 30 100.0 35 .............................. ATTCCATACTTGCAATTGTCTGGAGAATGGGGGAA 1026431 30 100.0 40 .............................. TAACCGAATCCCCCTTTGGTTGTGGGACAAAGGATATCCT 1026501 30 100.0 36 .............................. TCATATTTTTTGATAAATTCAACCAAACTAGAAACC 1026567 30 100.0 37 .............................. TTCAAGTAATCGTCGTCCCACAAGTCAAAAAAAACTA 1026634 30 100.0 37 .............................. AGTATTGTTCCACGCTATCACGAGATTCCCCATATTA 1026701 30 100.0 35 .............................. TAGCGAACAACCCGAATGTTTTACAACGTATTTCA 1026766 30 100.0 36 .............................. GAAATATCACACTCAAAAATGTCAATACTTGTACCG 1026832 30 100.0 37 .............................. ATTGGGTGGTGGTTTGAATGATTACATACGCTATTCT 1026899 30 100.0 37 .............................. CTTTGCGCAAATGTTACAAAAATTGAGTTTTAATCCC 1026966 30 100.0 34 .............................. TTGGAGTAAAAGGTCACCAAAAATTGAAGTTACA 1027030 30 100.0 37 .............................. TCTACAATTTTCTCAATATTCCAACTATCAACAACAT 1027097 30 100.0 37 .............................. CTTCATCGATGAATACAATACCGTCACGCAATTTCTT 1027164 30 100.0 38 .............................. ATTCAATCAACTTAACCATACATATATCAACCTCACAT 1027232 30 100.0 35 .............................. GTATACCATATATTTTCACTTTTTGCATTGCGTTT 1027297 30 100.0 36 .............................. ATCTTTTCGGCTCTACTGTCGATCTTTCGGGGTATA 1027363 30 100.0 35 .............................. TATGTGGAATAAAAGAACGCCGGCAATTGAAGTTT 1027428 30 100.0 36 .............................. CGTATGACTCAAATACTGGTTCATGGAATACTGGCA 1027494 30 100.0 37 .............................. CAACGTATTTCGTAGCTCACGAGTTCTCTCAAAATCA 1027561 30 100.0 38 .............................. CTTTTTCGATGAACTCTCTGTACTCTAAGACTTTCTCA 1027629 30 100.0 37 .............................. TCCTTTGTCAATATCCAATATAATGCCATACATACTA 1027696 30 100.0 37 .............................. TTCGGTTAGGTGTACATAACATAATTAGGCAATCCTA 1027763 30 100.0 37 .............................. CAGGTTGTAACAAAAGCGTTTCACAAACGAAATGAAA 1027830 30 100.0 36 .............................. CTGGTGCAGCTGCACTTTCTACTTGGGCAAAGTTCG 1027896 30 100.0 35 .............................. TTTACATTATAGAAAGGGGGTGAATGTGAATGAAT 1027961 30 100.0 36 .............................. TTTTGAACGTTTTTAAATGCGCGATACGTCTGTTTT 1028027 30 100.0 36 .............................. CTTTGCGAAAATGTTACGAAAAAAGGCTTCAATCCC 1028093 30 100.0 34 .............................. TTGAAGGGGTTAATTCTGCGTGGAGGATTTATAC 1028157 30 100.0 36 .............................. TTTGATTTACCAAACCTCTATTTCTCATATTTCTTT 1028223 30 100.0 36 .............................. ATAGCAAGCTTTCTTCTTTGCAGAATGATATTGCAG 1028289 30 100.0 38 .............................. TTAAGAAATACCGACGCTTGTATTTCGACCACAAAAGA 1028357 30 100.0 37 .............................. TAAAGCCAGCCAGGAGGCTCGGAGACAGAGTCTCCGG 1028424 30 100.0 36 .............................. TCAAAAGCAAGGAAAGAGAAATTCAAGTGCAGGAAA 1028490 30 100.0 35 .............................. AAAAGGAGGAAAAAAACATGAGGTATATTGCAAAT 1028555 30 100.0 35 .............................. CAATAAAGTCAACAAGGAAACCAAGAAGGAAATCA 1028620 30 100.0 38 .............................. TAATGTTCCTTTTTTTAAAGATGAAGAGGGTAAACTAA 1028688 30 100.0 37 .............................. ATTCATAAGTGAGCAATTCAAATGTAACAAAATGTAA 1028755 30 100.0 37 .............................. ATGGACAAAAACAAAGGTTGTGTTATACTTGTAGTAG 1028822 30 100.0 36 .............................. TGGTATTGGCTTTTACTGGTAAGCCTGGAGCAGGCA 1028888 30 100.0 36 .............................. ATTCGATACTTGCGGTCGTTTGGAAGATGGGGGAAG 1028954 30 100.0 35 .............................. TGGATGTTTTTGTTTCGGGGCTTGCTGCTCTCTTT 1029019 30 100.0 35 .............................. TGTTTGTTTTGAACTCAATACTTGCAATTGTATGG 1029084 30 100.0 36 .............................. CAGATATGGTGAACATGGGCTACAATCTCGATTATA 1029150 30 100.0 37 .............................. GACGCTAACTCTTTTATTCCAGGGACCTCGTGGTACC 1029217 30 100.0 36 .............................. GTATTAAGAAGAGAAAATTTATTACCCCTCTAATTG 1029283 30 100.0 35 .............................. ACAGCTATTAGGGAACCACTCCGCTACGAACTCAG 1029348 30 100.0 34 .............................. GAGACATCGTACGATTTTTTAGGAAGAATTTTCG 1029412 30 100.0 34 .............................. TCAGCACTTTTTAACCAGGTACAAAGTGCTATCA 1029476 30 100.0 35 .............................. ACAAACAAGACAAAGGAAGTGGTGAAAGCAAATCA 1029541 30 100.0 39 .............................. GGCTGTCTTGACCGCTGGGGACCCCCTCCCAGCATACGC 1029610 30 100.0 37 .............................. GGTGTGCCAAATTCGGTTAGGTGTACATAACATAATA 1029677 30 100.0 34 .............................. ATACTAAACATAACCTGTTTTAACTTACGAATAT 1029741 30 100.0 37 .............................. AATTCTATTTCCGGATCTCCTTTACTCCACCTCAAAA 1029808 30 100.0 34 .............................. TACCACCACCAGCGGTATACGTCGCTACTTAAAA 1029872 30 100.0 36 .............................. CCAACTTGCGACATCATTTGTATGCCAAGAGTATCG 1029938 30 100.0 37 .............................. GACAAAGAAAAGGCGTTGAACGTGGCTTTGAACAAAC 1030005 30 96.7 35 ......................G....... TTCCATCTATAATAGCTAAATCTAATATATACACC 1030070 30 100.0 38 .............................. GGTGTGCCAAATTTGCTTAGGTGCGACTAGGCAAATGT 1030138 30 100.0 37 .............................. TTAATTTGTCTAATTCCTCGGGTGTTATCCCAAGGAG 1030205 30 100.0 37 .............................. TGATGAAGAGGTGGCTAAAGAACTGTTGAATTTTTTG 1030272 30 100.0 35 .............................. GTTGCTTTCGCTGGGGGAGGGGTCCCAGCGTATGC 1030337 30 100.0 37 .............................. GACCAAGACGTATACCACACATGGTGGCCTAACGTCA 1030404 30 100.0 37 .............................. GGTGTGCCAAATTCACTTATGCGCGACTAGGCAAATG 1030471 30 100.0 37 .............................. GGGAATATTTTTGGTTTACGAGTCGTTGGTACTTTTG 1030538 30 100.0 38 .............................. TTGGAATATCTCTTGGTACTTTGAGCTCTCCGATAACG 1030606 30 100.0 37 .............................. TTCATAAACGTAAATGCTCCACTATCTATTAGAAAGA 1030673 30 100.0 38 .............................. CAGCAAGTTCATTGACAAATTCAAAAACTGTAGTATAC 1030741 30 100.0 34 .............................. TTTCTTCACTTCGAGTACTTCTCCAGAAATTCAC 1030805 30 100.0 35 .............................. TGGATATGTTGCTCGAAAAACTTTCTATGATCACA 1030870 30 100.0 37 .............................. GAAATTTCACTACATCAATTTCTTCTTCGTAGGCCAA 1030937 30 100.0 35 .............................. TTGGGTGTTCTACAATCGCTATGGAATGGCAATTG 1031002 30 100.0 36 .............................. GAGCAATCAGACGCGGTGACGGTGAGCTCTCGCTAG 1031068 30 100.0 36 .............................. CAAACAAAGAGAAGTAACAGATGAATTACTTCAAAA 1031134 30 100.0 36 .............................. ATGGTTTATGAAGAAATTGATACAGAGGAATTTCTC 1031200 30 100.0 35 .............................. GCAAGTTTTTTAAAAAGTCTTACAACGGTAGTGAC 1031265 30 70.0 0 .T.....TTC.C..C..A.C.....A.... | ========== ====== ====== ====== ============================== ============================================ ================== 179 30 99.8 36 GCTTTTAGCATACCTATTAGGGATTGAAAC # Left flank : AAATATAACACCAATATCAGATTTTTCGATTATAGAAAACAAGCCAAATTTTGTGGATGTTTTTGTAATGTGCGATGATATTTCAGAAGAAGGTTTTAAAAGATTTTGTGACATAATAAAATTAAAAGATTATTATGAAAAACGAGAAAAGTACTTAGAAATAAAGCCAATAATAAGCAATTACACAATTTCAGTACCGATAGAATACCATTCATCTTTTGTTGAACAATTTGGACTTTATGTTATTCCACGTGAAATAGTAAATGATTACTACAATTATGAAACTGGGTTTAAAAGGCACAAGAAATCTTATGATATAATATGAATAATATGATATAATATAAACACAAGCATAAAATTCGTCGACCATCAATCATGCAAAAATAACTGGAGATCGACGAAAAAGAGAAGTAAGAAAATTAAAAGGTTTTGGAAGTTGATTAACAAAATAGTAAAAAACAATAAAAATCCAAAACCTTTTAAAAATCAATACCAAGCGG # Right flank : CAAGATATAGATTACTTCTCCTGCATCATTTGGAAGTTTTTATTTTATCTTAAAAATTGAATTTTCTTAATTGAAAAAAAGAAATCTGTTTTATCTATGAAGAATTGAAACAATGGTTTTATCCAAGATGTTTGGAATTATGCTATAGTTATTCATAATTGTTTTTAGAGGTGGTTGAAAAATTGGATGTAGGCGGAACACTAATTTGGTATTACATGATTTGTAAAAGAGAGGTTTGGTTAATGACACATGAAATAGTACCAGACCAACATAATGAGAACATAGAGCTCGGACGATTTATTCACGAGTTTTATTATAGACGGGATAAAAAAGAGATTAGATTTGGTAATGTTGTTTTTGATGTGCTCTATGAGAAAGGTAATCGACTCATAATAGGAGAAACGAAGAAATCTTCTAAGTTTTCTGAAGCATCTAAATGGCAGTTGATTTATTATCTAAAAGTTTTAAAAGATGCAGGTATAAGTGCTGAAGGTGTATTG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTTAGCATACCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 2 1506355-1507353 **** Predicted by CRISPRDetect 2.4 *** >NC_009718.1 Fervidobacterium nodosum Rt17-B1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================= ================== 1506355 30 100.0 35 .............................. AAAGATTTTTCGTTCCCTGTTGAAGTATGCTACTC 1506420 30 100.0 36 .............................. TTGCCAACGCTAATTTGTTATCACCATTCTTGAGTG 1506486 30 100.0 34 .............................. ATATCCGAAAGTTTTTGTAGCAGCTCGTCTGTCA 1506550 30 100.0 40 .............................. ACTTCCCTTTGTTCGCGAGAAACTTCTTCAAGAACTTCAA 1506620 30 100.0 43 .............................. CAAAGTATCTTCTTTACCAACCATACCCAACACCTCCTCTTAG 1506693 30 100.0 41 .............................. GCCCTGGAGGCTTTGATGAGCTTGTCAATCTCTTCGGGTGT 1506764 30 100.0 39 .............................. CCTAAACCGGCCCCGCTTGTCTGCGGTCCAATCTATTTC 1506833 30 100.0 45 .............................. TTCTTTGACGATCTGAATCAGTTCCTCTGTGATAATAGAAAGTTT 1506908 30 100.0 41 .............................. TTGTTTGTTCCAATGAAAAGTAAACATCGACGACGTCTTCG 1506979 30 100.0 36 .............................. AAAGTTCTGAACTCTCCCTTCCCAACGTTAATGTAA 1507045 30 100.0 42 .............................. TTGTACCCCCCCTTTAACAAGCTTCTTACTTCCTTTAAAAAA 1507117 30 100.0 38 .............................. TTTAAAATTGCCTCATTTATAATTTTGTCTGGAACTGC 1507185 30 100.0 39 .............................. TCACTCAATAGTTTCTGTCTCCTAATATCCTACGAAACT 1507254 29 80.0 41 .........A.A.....-.AAA........ AATAAAGATCTGGTCAAAGACCAGGCAAAATGCTAAAAAGG 1507324 29 80.0 0 ..........-......C........TGTT | G [1507337] ========== ====== ====== ====== ============================== ============================================= ================== 15 30 97.3 39 GTTTTAGAAGTGACTATGAGGGATGGAAAC # Left flank : AAATAACGTGGAAAATACAGAGAACTGACACTGCATTTCGAATCAATATGATATTCATTTTGCAATATAATAGCAATTGATAATTAATATCTCATCTGTAACACTAATTGAGATGATCGACAGTAATTCTAAAAACTTTTTATAGCATATGTTAGCAAAAAAAAAAGAACAACAACCAACACTAAGTAATATAAAAGAGACATTATAGACACTCAAAAGTTACATACATCTTAATTTATATGGTAGCAACATTAACATATAGCTCGCTGAAAATTGGCAACTAGCGTCAAAACACGCTAAATGAACTTATGGTATGTAACAAATTTGTTAAGTTGAATTCTTGCTACTAATCTTCTCACCTAGAACTCAAGACTTCTTTCTTGAAGAAACACTCGCAACTTCTTTATCTATGCTCTAACTTCACAGATCAGACGAATTTTACAAATGTAACTATCAATTTTAACATAAAATGTTGTATATTATATATGAGGGATGGACGA # Right flank : TTTTCTCAAGAGGGGTTTTTCTAACTAATCATGTTGTGATAGAAAGAATGTTTGGTAGTTAAGTTCTTTTGTTTTTTTGATATAATTGTCTTAGACAGGAGTGTTTGTTTTGGGGTGAGAAGACTTGAAAAAGCTCGGAAGTTATAAGTTTTATTCTCAACTTGTCATTTTCTATCATCCAGCGAAGACGGTTGGAAGTTTTTTGAATCTTCCAGATGTGTATATGTCAAGGAGTGGTACGAGATCATCAAGACCCGGGCTCTTGGAAGAAAAGGGCTCGCAAGTTCTTGTTGCCTTTCTTTCTACAAAGAATTATTCGGGTATAAGATTTAATTTGATAGACTGTTGTCCTTTGGCAAACGAGAGAATTTACGGAAACGAAAATTATATAATGAAATTCCATGGTGTTTCAGTCTTTAGGCTACCAGTTTTCTATATCAATAATTTAAAGCGAGAGAAGAAGATTGTCTTCGTTGCTGGTTGTTCCATTGATTTAGAGC # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTGACTATGAGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //