Array 1 72600-76348 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFWC01000004.1 Gallaecimonas pentaromativorans strain YA_1 contig4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 72600 28 100.0 32 ............................ TTAAAATCATCAATTGGTTTGTGAACTAACTC 72660 28 100.0 32 ............................ ATATGAGCGTATCGAGTTCAATGGGGGTGTTG 72720 28 100.0 32 ............................ ATGACGAGCTGCGGGTAAAAGTGCTCTACAAA 72780 28 100.0 32 ............................ TATACATTTCGGTATTGGAGGCGGGCATGAAG 72840 28 100.0 32 ............................ TACGAAAGGCTGGGCTACTCCGGCCGCCAGAG 72900 28 100.0 32 ............................ AGCGTGGGCAATGCAAAAACAGAGCAATACGC 72960 28 100.0 32 ............................ AACACCAACACCACCTGGCTTCCTACCGATAT 73020 28 100.0 32 ............................ TCCCTAAATTTCAGCGTGAATGAGCTAAGCAC 73080 28 100.0 32 ............................ TCCATCACGCTCTGGCTTGTTAGACCAAAGCC 73140 28 100.0 32 ............................ GTGGCGAGCTGGAGTTCATGGGGCCGCAGTCT 73200 28 100.0 32 ............................ ATGAGGCATGGAACAGCTGGTTTGTTCCTGGC 73260 28 100.0 32 ............................ TTAACGATTGATTTCGATTTCAGTAACTTCAC 73320 28 100.0 32 ............................ TTACTGTCGTTACACTGAAAAAATCATACGAT 73380 28 100.0 32 ............................ GATGCATACGAGCGCATAGCAGATGCAACGGC 73440 28 100.0 32 ............................ TGCTGAAAGACATTCAATACGGAAACTTTCCA 73500 28 100.0 32 ............................ AGCAGGTAGACCGACAAAATACAGAGACAGCT 73560 28 100.0 32 ............................ AAGAACAGCAAGCGGGATATACGGGCGCACCT 73620 28 100.0 32 ............................ GTGACGAGGCTGACGTACAAGCCACCCTCCGC 73680 28 100.0 32 ............................ TTCGGACAGTGGCCGCTTGAGGCCTCGGGCAA 73740 28 100.0 32 ............................ TGGTCAACCGCCCAAATTGCAAGCTCCCTCTC 73800 28 100.0 32 ............................ GCCAAGCAGCACCAAGACAGCGAAGCCGCTGA 73860 28 100.0 32 ............................ GTCTATCATGGCAAGCCCTTGGCGTCCTTAAC 73920 28 100.0 32 ............................ ATTCAGAACACCACCAAAAAGATCCTGCCTGA 73980 28 100.0 32 ............................ GGACGGCACCCTCATCAAGGATGGTGACAAAA 74040 28 100.0 32 ............................ TGCTCAACCACGCCGAAAACGGAGTACGTGAC 74100 28 100.0 32 ............................ ATGGGTGCCCGCCAATGACAGCCACTTTAGCC 74160 28 100.0 32 ............................ CTGAATTGGAGCAAGCAGCATGACCGCATTGG 74220 28 100.0 32 ............................ CTGGGAGACGAGTTGGCGGCATGGGCCCTGTA 74280 28 100.0 32 ............................ ACTATCACAGACAAGATAGCCGTCAGCGGTGG 74340 28 100.0 32 ............................ TTACGTTATCCGTGAAAAATATGAACAAGGTT 74400 28 100.0 32 ............................ TTGATGTCTGCACCGGCATCACCCAACTGCCT 74460 28 100.0 32 ............................ AAAGAATGATCGTTTTCATGCTGCCACCCCAT 74520 28 100.0 32 ............................ ATCCTGATGCGCAACTACCTGGAGGCCCACGG 74580 28 100.0 32 ............................ GGGCAAAGAGGAACGACCCATGAAATACGAAT 74640 28 100.0 32 ............................ TTACGTTATCCGTGAAAAATATGAACAAGGTT 74700 28 100.0 32 ............................ TTGATGTCTGCACCGGCATCACCCAACTGCCT 74760 28 100.0 32 ............................ AAAGAATGATCGTTTTCATGCTGCCACCCCAT 74820 28 100.0 32 ............................ ATCCTGATGCGCAACTACCTGGAGGCCCACGG 74880 28 100.0 32 ............................ GGTTCAAAATCGGGAAAGTCGCTTTGACGGAC 74940 28 100.0 32 ............................ TGGCGCCCCCACCAGGCCAGGTCACTCATCGG 75000 28 100.0 32 ............................ CCCATCAATGAGTCAGAACGTTGAGGCCATTC 75060 28 100.0 32 ............................ TGACAAAGAGGAACGACCCATGAAATACGAAT 75120 28 100.0 32 ............................ GAGATAATCAAAGCCGCCCTGGGCGCGCAACA 75180 28 100.0 32 ............................ AAACGCCCCCACCTCCATTACGCTTCCCGCGC 75240 28 100.0 32 ............................ GAAAAATACCAGGGCCGCGACGGGCGCTTATA 75300 28 100.0 32 ............................ TGTACCAGGCAACGGCCGATGCCATGCAAATG 75360 28 100.0 32 ............................ TTATCAATCTGGAGAAGCGTAGCTTTTTGGAC 75420 28 100.0 32 ............................ TTGTCACGGATGGCGGCCATGTCTTCGTTGCT 75480 28 100.0 32 ............................ ACGACCCCGCCGCCATTGCCATGCACGCAATG 75540 28 100.0 32 ............................ AACGCAGTAAAAGCCGAGTTCGTCCGCTCCAA 75600 28 100.0 33 ............................ ATTCTGAAAATGAGCGGGGAAGCATTCTGGGTT 75661 28 100.0 32 ............................ AGGGCAATTGAGCGACTACTGAGACCATGGGG 75721 28 100.0 32 ............................ CTGGGCTTTTTCTGTACCAGAATTGTCCCATT 75781 28 100.0 32 ............................ ACCGGTTTGCAGCGAGAACGCGCGCTGCTGCG 75841 28 100.0 32 ............................ TATAGCGCCGTGCGGGTGGTTGAGCCGCATGT 75901 28 100.0 32 ............................ GTATGCGCTGGCCAAAAAGGCCCAGGCCTATC 75961 28 100.0 32 ............................ AAAGCAGGGTGTTGCTGTCGTATTCCATCACG 76021 28 100.0 32 ............................ GTCCACGTCTTCGTGCCAGGGGTTGCGCATCA 76081 28 100.0 32 ............................ ATGATGAACTGCTAAATGCCGGTGCCTTCGGC 76141 28 100.0 32 ............................ AGCACCAGCATCAACGCACAGCACATGGTCAA 76201 28 100.0 32 ............................ GCCCCTGATTACCGCCTGGCGGCGCCTTATAA 76261 28 100.0 32 ............................ AGTACAAAAATATGAAGGGAATTTCATCAGAC 76321 28 89.3 0 ....................T.C...G. | ========== ====== ====== ====== ============================ ================================= ================== 63 28 99.8 32 CTTCACTGCCGCCCAGGCAGCTAAGAAA # Left flank : AAACCCTTGATGGGCTGATGGCCGAGCCATGGCTGTTGGGAATGCGCGACCATAGCGAGGTGGGTGCCATTGCGTTGGTACCTGACCATGCACGATACCGGCAGCTAAAACGGGTACAGGCCAAAAGCAGCCCAGAGCGGCTTCGCCGCCGCAGCATCAAATGCCTGGGTATCAGCGAACAAGAAGCCAAAGCGCGGATCCCCGACAGCGCCGCTAAATGGCTTAACTTGCCGTACTTGCAGCTGCAAAGTGGCAGTACCGGCCAGCGGTTTCGCCTGTTTTTGGAATTGGGGCCATTGCAAGAGGCGCCGCAGCCCGGCCTGTTTAACCGCTACGGCTTAAGCCCATCAGCCACCATCCCATGGTTTTGACCCTTTTTTAAAGGCTCTATAGGGGGCCTTTAAAAACAACACCTTACAGCGCAGCTCCACAAAAGGGTTGCGCTGTCTTTTTGCGCCATTGCTCTTTAACAATCAAAACGTTAGGTTGGATAGGCTCTA # Right flank : AGCGGCTCCAAATCTGACTTAATAGATTTAGTTTTTCTTTGGTGCCACATCAATTCTTTCAGCACTCTCTTCAATTCAGAGTGTTGGTTTCTATGGAGAAAAGATGTGCTTGTTGCTGACTCTTTTAAATAACTAAAAAATGGGTGGCACTATCGGAGATATTTGCCTTTGTCCAGCCGCTAAATTGACCAGGGTAAGAATTTAAAAGTTAAAAAAACTGCGATGTTAATTTAATGCTCGTTAGTCATTCTGGTTTTTTCACAACAACGAGCATGCTTAATATGAAAAAAACACTGTCATCCCTGTTATTGATCGCATCGGCGCTGTTTTCCGGCCCGTTGCTGGCGGCCAACTGCGTTTACGGTTGTCCTACCGGTAAATCGGGCCAGGTGATCGAGCGTTCCATCTATACCCTGCAAAATAACGCATCCACCAAGTTTGCCGATTGGGCGGCTTACCATGTCACCGCCAGCACCATTGACGGCCCAACCCGCACCCGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGCCCAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACTGCCGCCCAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //