Array 1 30945-33155 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPJN01000031.1 Gallibacterium anatis strain 21K2 contig000029, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================================================= ================== 30945 36 100.0 35 .................................... CAAGTACATTCTGATGGTTCACTTCACCCATACGA 31016 36 100.0 35 .................................... ATTGTCAACATAACAGAATTCCATAGTTACTCCTT 31087 36 100.0 36 .................................... TATTAAGAATTCGTAAATATCGTTAGGGTCGTGTCC 31159 36 100.0 36 .................................... AAAGGTAGTTATATGAGAATGCCCTTTGTGGTTGCC 31231 36 100.0 36 .................................... CTTTCCATCCTTTCACGTCTACCGCTTGTTGTATGC 31303 36 100.0 34 .................................... CCTACCGCGTGATGTAGGCGGTTCATCTCTGCGT 31373 36 100.0 33 .................................... GCGTAATGATAAGGGCGGTTTCTATATGTTGGT 31442 36 100.0 36 .................................... TCGTGCAAGCTGCGGATCATAGAATCTTTTTCTTCC 31514 36 100.0 35 .................................... GTACTTGCTCTGCTCGTTCTTTCTGTTTTATATCG 31585 36 100.0 33 .................................... CTTGCTAGCCATTATGTAATCACTCAAAGCAAT 31654 36 100.0 34 .................................... ATTGCGTCCATTAGTTACTGCAGGGTACAGGCGA 31724 36 100.0 34 .................................... CTACCTGATAACCTTTAGCAGGCCACCATTTCCT 31794 36 100.0 36 .................................... GAAAAATAAAATATATCATCCGCCAGCTTCTCAAAG 31866 36 100.0 37 .................................... TTAAAATAAATTTAAAAATTTTATTTTTTATTTTTGC 31939 36 100.0 35 .................................... ATGCATCCGCATCCTGTGGCTTTATCTATACCGAC 32010 36 100.0 35 .................................... AAATTTAAATTTATTTTTAAATTTTTTATTTTTAG 32081 36 100.0 37 .................................... ATTTTTATTATTTAAGAACTTCATAATTTTTTATTTT 32154 36 100.0 35 .................................... AAATTTTAAAAAATAATTTAAAATTTTTATTTTCT 32225 36 100.0 33 .................................... GATAACATATTGCTATACTTGGAATCATCAAAG 32294 36 97.2 36 ...................T................ TGGTTTAAGTCTCTCGGCTGCGTCATGTTCGTCTTC 32366 36 97.2 34 ...................T................ ATAGCATCTTATTCCTCCTTAACCAATGGCTGTT 32436 36 97.2 33 ...................T................ TATTCATACCCGTGAAAATCCTCAGCTGTACCG 32505 36 97.2 37 ...................T................ GATTAATGTAACTATTAGCGATCAATTCATCAATGAA 32578 36 97.2 35 ...................T................ AATAGGCTAGTTCCGCACTTACATCAGTTAAAAGT 32649 36 97.2 35 ...................T................ TTCACGTTCAGTAAACAGTATTTTAAACCCTCGAT 32720 36 97.2 35 ...................T................ CCGTCTTAGATTGGTTACTGAGTACCAGTAGCCGG 32791 36 97.2 38 ...................T................ CTCTTCGTATTCGCCCGCAATGGATAGCTCTCCCCAGA 32865 36 97.2 35 ...................T................ CCCACCAACCAGAATAGATTGGTTGGTGGGTGTCT 32936 36 97.2 35 ...................T................ ACTAACACCGCTGTGATACTGAAGTGCTATAATGA 33007 36 97.2 77 ...................T................ TTGCTCCATTTACAATATTCTGCCCCAATTCAAATAAGTTCTAACTGCCGTTTTATAAATTTTGTGGAACGCTTCTG 33120 36 86.1 0 ...............................ACTTT | ========== ====== ====== ====== ==================================== ============================================================================= ================== 31 36 98.6 37 GTTCTAACCTAGCCCTGTTCTAAAAGGGATTGAGAC # Left flank : AGAGGTTGCAAGATTGATTAAACAGGTGGATGACAGTGATGATTACCATATTGCATTGGAAAGTTTCTTTTTAAATCAACTTAGTATGTTGGCACCGGAGGAATAAAATGAAACAGTTCGTCATTGGTTATGACATTACAGATCCTAAACGGCTACAAAAGGTTTATAAACAAATGCAACATTTTGCGATTCCGTTACAATATAGTATTTTCTTGTTTGAAGGAACAAAGGAGCAGTTGCAGAAAGCTATTGCGCCAGTGATTGAAACAATTAATAATAAAAAGGACGACTTAAGAATTTATGAATTACCGAGTTATGGATTAAAAGAGCGAATCGGAAAAACAGTTTTGCCGGAGGGCATTGTGTTAACGGCGCTACCAACTAGACTATAATTTTGCTTAAATAATAATCATATTGGAGGTTAACTATGCAGTCATTTATACTTTTTGGCAAAGCCACTTTTAATTTATTGATTACTAATGTATTTTACGGTGTCGGGA # Right flank : TTATAAAAGACATTAATGATAATTTTTTAAGGAAATATCAAATTTGAAATTTTTCTATCTGTAGTAATGGTTATATATACTTAGCTTTGTTATTACGAAGTAATAATGAAATTAAATATTTAGTGTATAAATTTAGGAGAAATTTTATGAAAACAATTGCAATTATTTTAACTACTTTATTTGCGGTTACCGTTACTGCGCCTGTGTATGCCGGTTCTTGTGATTATTCTTGGCAAACTGCAAAAGACGGTTCCCGTTGCGGAGATCGTGCTGCAGACAGAAGACCGGGAGGCAGATAAAAGATAAAATGCATCTTTGATTATTTACTATAGTTATTATTTTCGCTTCGCCGGCATTTTGTTGGACGGGATATAATTATGATACCGGCTCTTATTTTGAAGTTGAACGTTATGATCATCAAGGATTGGGTGAAGGCCCGGTGGAATATTATGATTATAACAGCGGAGAATATAAATCAGGTTATTTAGATCTATTTCCCG # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTAACCTAGCCCTGTTCTAAAAGGGATTGAGAC # Alternate repeat : GTTCTAACCTAGCCCTGTTTTAAAAGGGATTGAGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //