Array 1 97695-96205 **** Predicted by CRISPRDetect 2.4 *** >NZ_JANB01000066.1 Fusobacterium sp. CM1 ctg7180000008772, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================================================ ================== 97694 36 100.0 43 .................................... TATTTATGGAATCTATGCAAGATACAATGAAATATCTTTGTGA 97615 36 100.0 38 .................................... TTAAAGTTGCAATTTCTGCAACTTTTAAATTATTTATA 97541 36 100.0 40 .................................... ATACATATATTTTTCTATACTATACAACTTTTTAATTAAA 97465 36 100.0 39 .................................... CATAAATTCCAAGAGCGTCCATATATACCACGCTCCTTT 97390 36 100.0 43 .................................... TATTCTTTTCCAAGAGTTTCTATTGTTTCTTTTAATTTACTTT 97311 36 100.0 38 .................................... AAAATATACAGCTCTTGCAACATCTTCTTTATTCCAGC 97237 36 100.0 37 .................................... TTGAGTATACATTGCATAAGATGTTGTATATTTTAAA 97164 36 100.0 39 .................................... ATCTATATCCTCATTATTATCCTTATTGTAATTAACCAA 97089 36 100.0 34 .................................... TTTAATACTCTTTAGTATTAAAAGAATTTCTTTT 97019 36 100.0 37 .................................... AGAAAACAAGGTAAATGTAAAGGAAATAGTAGAAAAA 96946 36 100.0 41 .................................... TAGATTTAGACTGGTATTCCCTTGGGTATTGGACAGTTCAC 96869 36 100.0 36 .................................... TTGTAAGGCTTTCTCTGTATCCTCATTGTCTAAAAC 96797 36 100.0 38 .................................... TTACCCCTCCTATTTTAATCATTAAGTATCATTATTTC 96723 36 100.0 37 .................................... TTTAAGACATCTATACAATTATAGATGTCTTTTTTAA 96650 36 100.0 42 .................................... CTAGGTAAAAATAAACCTCTTAACCATTCAGAAAACCATATG 96572 36 97.2 49 ...................................T TTTTAGTGATTGACGATAATGTTGATTCTTCCAGTATAAGTTGTGTCTA 96487 35 77.8 61 ........T...G......AC.-...G...A....T TAAAGATATAGTCTTCTATGAAAAGTAAATATCATAGAGGGCTATATTTATTTGAATAAAG C [96470] 96390 36 72.2 112 ........A.........TT.TA.A....TA..G.G TCATTTGAATTGCAAATTGATGTTGGAGAAAATTAAAGATTAAAAAAATAAAATTAAAGCAGGAACGAAAATTTTGAAAAAATTCTTTTGATATAGTATAACATTAAACAAA T [96386] 96241 35 83.3 0 ....-........C....T.A.........A....T | T,A [96228,96233] ========== ====== ====== ====== ==================================== ================================================================================================================ ================== 19 36 96.3 45 ATAAGAGAGAATATAACTCCGAGAGGAGACGGAAAC # Left flank : TGCAGATATATATAAGCCAGTTTTAATTAGGTGATATTATGGATAATTGGGATTTTTTAGATGAAGATTTTGAAAAGGAGATTTTTGAAGATAACTTTACTGTTATTATAATTTATGATATTATATCCAATAAAAGAAGAACACAATTATCTAAACTTCTGAGTGCATTTGGATTTAGAATTCAAAAATCAGCATTTGAATGTGTTTTAACAAGAGAAAAATATAAATTACTTATTGAAAAAATTGATAGATATGTAAAGCCTGAAGATTTAATAAGAATTTATAGATTAAATCAAAATGTAATAACTCAAATTTATGGAGAAAAATTAGAAAATGAAAATGAAATGTACTACTTTTTCTAATGAGAGTTAGACGATATATTAAAAATGGGAGGTTTAATATGATTTTTGATAAAATAAAATGTAAATTATTAAAATTTAAAAAATCATACGATAATAGCTCTATAAACTATTACAAACAAAAAGTTTTTTGAGTATAGG # Right flank : TCATTCTATTGACAAGAAATCAATATCTTTTTATAATATCAGTATGAAGAAATAGAATTCTGAAAAAAGATAAAAAGTGTAAAGATGTTATGATATTCTAATATTCAACTAAGAATTTCTCACAATTGAAATTTTTATAGAAAAAATAAAAACTATTTAAGGAGGGATTTTATGAAAAAAACACTATTTTCTATATTGCTTATAGGAATTTGTATGACTGGAGTAGCAAATGCAAAAGAAAAAAATCCAATTCTTTTAAAACAAGTATACAAAAAAGAAGAATTAATAACATTAGACAAACAAAAGGTAGCAGGAGGAAATGGAACTTTACATGGGAAATTTGCCTTTACTAGAGATATGGCTACTGAAGATGAAGCTATCAAAGAAATAGGATGGATGACATTAAATAAAGGGGAATCTATTGGTGTACACCCTCATAAAAATAATGAAGACACTTACATTATTGTTTCTGGAGAAGGTGTCTTTACAGATGGTTCTGG # Questionable array : NO Score: 2.61 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:-0.45, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAAGAGAGAATATAACTCCGAGAGGAGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.30,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [29-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 80279-78403 **** Predicted by CRISPRDetect 2.4 *** >NZ_JANB01000091.1 Fusobacterium sp. CM1 ctg7180000008816, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 80278 30 96.7 36 ......................T....... AAAAATTTTAAAAATACTCTATATTTTGATGTAAAT 80212 30 96.7 35 ......................T....... AATTCTGTAATGAACAATGGATATAGATATAACTA 80147 30 100.0 36 .............................. TGATAATAAGTATCATCTGTTGTCATAATTCTATTT 80081 30 100.0 37 .............................. TATATTGAAATGTATAGCTTATCAGAATTAGAAGAAA 80014 30 100.0 36 .............................. ATATTTAAGGAGGTTATATGTTTAGTTTATCAAATA 79948 30 100.0 38 .............................. TAATCCAGAAGCAAAAGAAAAGAAAAAAATAAATTCTA 79880 30 100.0 36 .............................. TCCTCATCCATTTGTGCTGCTAATTTTAATATTAAA 79814 30 100.0 35 .............................. TTTCTCTTTCCTCCTTTATTTTTTCTAGTTGTCTT 79749 30 100.0 35 .............................. GAAATATTAGCTTTTTGTAATTCTTCATACAAATC 79684 30 100.0 37 .............................. TACCAAACCCATCCATTGATTTTGTATCTCTACCTAT 79617 30 100.0 36 .............................. AATTACTGAAGATTTCAGTATTGATATTCTAGGTGA 79551 30 100.0 36 .............................. GAAATATCGTTGTATTGTCTGATGCTTTATTACCAA 79485 30 100.0 35 .............................. GCTTATGATATGGCTTGGTACTTGAATAAATCAAC 79420 30 100.0 36 .............................. TGAAAGAGAATATCAAGACTATATGGCACTTATAGA 79354 30 100.0 36 .............................. AGATATAGCCTTAAAAAATGGCTATACATTAGATTT 79288 30 100.0 36 .............................. GTACCACAAACACATAGAAATAAATAACTTAAAAAA 79222 30 100.0 35 .............................. GGATTTAATGAGAGATGATATTTATTCTACATTTA 79157 30 100.0 35 .............................. ACTTCTTCCTGCCATATTTTTTCACCTCCATAAAT 79092 30 100.0 36 .............................. CATTTTAATTAAAATGTCTAAACATAAACTATTCTT 79026 30 100.0 35 .............................. TAGGGGTTCTGAAAGAGGACAAAGAGAGGAGGATA 78961 30 100.0 36 .............................. AATAGAATTTAATTTTATATAAAATTTTTAATAGCT 78895 30 100.0 38 .............................. AGTAATAGAGAAAAAGCTGGAGATTGTTTTATAAATAG 78827 30 100.0 36 .............................. TCAATTTGCTAATGCTTTACCAAAGCATATAAACAC 78761 30 100.0 36 .............................. ATACAAGCTATTAAGTTGCTTGTATTCTTAAGAGGA 78695 30 100.0 36 .............................. GGAGAGAAACGGGGATAATACATATTGTTATAGGGA 78629 30 100.0 36 .............................. AGAGGTTATAATAAAAAATATGAAGTTTAGGTTCAA 78563 30 100.0 36 .............................. TCCTCAGCCGAATTTATCGGCTTTTTTAATTTTTTA 78497 30 100.0 35 .............................. TGTCCACTAGTTCATAATCTTCACTGTCCTCAAAT 78432 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 29 30 99.8 36 ATTTCAAAACTTTTCAAGTTTACAGTTCAT # Left flank : TTTAGAAAAATTTATGGAGGTATTTAA # Right flank : AGCTATTTTTTCAAGCTTTGTAAATTTATAATACCTTATTTTTTTCAATATTACAAGTATTTTTTATATGTTTTTCCCAAGCAATTCTATTTTTTACTTAATTTTTCTAAAACAATCATATTTTGGAAAGTTTAAATAGTTTTTTAGAATATTGCTTGGGAAAATTTTTAAATTATAGAAATATATTTTCTCCATTTGGAGTTGGATTTCCCAAGGTTTCTTCTCCAAAAACATCAGGACTTATTGATTTTAAAATACAGACAAAATCTTCATTTTCAACTACTATACTTTTCAATTCACTTCTTAAACTAATTAATTTAGAGGGAGTTATATCCCCACGAAAAACAGATTTTTGAAAATGAGATAAATATTTTTTGCATATTTTAAAAACTTTATTTACTCTCTTTTCTGAAACATCATAAAATACCCAAGCATAATTATAGTTTATATTTTTCAATTTTTCTCATCCCCTAAACTAATATGAATTTTTTAAAGAAAAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCAAAACTTTTCAAGTTTACAGTTCAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 46-1594 **** Predicted by CRISPRDetect 2.4 *** >NZ_JANB01000087.1 Fusobacterium sp. CM1 ctg7180000008828, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 46 30 100.0 36 .............................. ATTTAATATTAAGGTTATAAAAATTTATAATCTTAA 112 30 100.0 36 .............................. AGTATCTTCCTCATACTCTCTTATCCCTAAATCAAA 178 30 100.0 37 .............................. GAGAGCTTTAAAAGAATAATAGTGGAAGAAAAAAGGT 245 30 100.0 35 .............................. TAAATGGAGTATTAAAAAATATTTTAAAAAAGTAT 310 30 100.0 36 .............................. ATATATATAAACTATCATTATATTCATTTTTTATTT 376 30 100.0 36 .............................. TAAAATTCATAGTCTTCTTGAATTTTTCTCTTTATT 442 30 100.0 35 .............................. CAAAAAAGAATTTTTATTAATTGTAGTGATTTAGA 507 30 100.0 37 .............................. ATAGAAATGAGTTACTAGAATTATTCAATAATAGTTT 574 30 100.0 37 .............................. TGCCTATGAAAACTCAGAATTATTAGGAGAACAAGAA 641 30 100.0 37 .............................. AAAATATGTTTATCAATTTCTACTATAATTTTGAAAA 708 30 100.0 36 .............................. TACATCAGAAAATAAAAATTGTGGAGGTATTAAAAA 774 30 100.0 36 .............................. TAAAAAATGTAAATTAGGATTAATTTATGATTTTTA 840 30 100.0 35 .............................. TGCAATATGTATAAAAATATAGTATAATTATAGTA 905 30 100.0 36 .............................. ATCAATTAATTGAAAATAATCATCTTTTTCTTTTTG 971 30 100.0 37 .............................. ATGAAAGATTTTTTGCATTACCTGATCACATAAAAGA 1038 30 100.0 36 .............................. TAACTTCATCATTGGATACAGCAACAAATAATATAT 1104 30 100.0 36 .............................. GAATTAATCGGCTTTTTTATTTTTAATTTTTATGAA 1170 30 100.0 36 .............................. TATTATTTTTTATAGTTAAATAATTTTTTAATCGAC 1236 30 100.0 36 .............................. ATTTATATATGATTAAATTAGTCTATTAATTTTATC 1302 30 100.0 35 .............................. GAATCATTTAATAATAATTCAACTAGTTCAAAATC 1367 30 100.0 35 .............................. AAATATGTATATAAATTTCTACTATGATGTAGAAA 1433 30 100.0 36 .............................. TCCTCAGCCGAATTTTATCGGCTTTTTTATTTTTTA 1499 30 100.0 36 .............................. ATATTTTTTTTATTCTATTATACCTTCTTCAGAACC 1565 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 24 30 100.0 36 ATTTCAAAACTTTTCAAGTTTATAGTTCAT # Left flank : ATAGTTCATAATCGTCTTTTTTTAAAGCATTACAAGTTTTAAAAAA # Right flank : ATGATCCAGATCTTGTATTTTTTTTACTATATTTTATTTCAAAACTTTTCAAGTTTATAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCAAAACTTTTCAAGTTTATAGTTCAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 1 11947-12769 **** Predicted by CRISPRDetect 2.4 *** >NZ_JANB01000093.1 Fusobacterium sp. CM1 ctg7180000008832, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 11947 30 76.7 36 .CAA.....T....TT......T....... TAAAGAAAATTATAGGGTTTCATATAATGCTATAAG 12013 30 96.7 35 ......................T....... CCAAATAGAAGAGAAAAGCTTGTAAAGATATATAA 12078 30 93.3 36 .....................TT....... AAAAGAATTTAATAGAAAAAGTTTAGAGCAAATGCT 12144 30 90.0 36 ...C.................TT....... TAGAACAAATTGATTTTTTACCCATATTAAACATTG 12210 30 93.3 37 .....................TT....... TAGCTTTGCCGAGCATGATGTCCTTTTTTCTAATAAT 12277 30 100.0 36 .............................. TTATTTGATTTTCTTTATACTTTTCAGAAAGTTCCT 12343 30 100.0 38 .............................. AGAAGACAAGGAGACAGAAGATTATTTCTCTTCTAAAA 12411 30 100.0 36 .............................. TAAAAGCTATGTTAATATTAATTTGTTCACATAAAG 12477 30 100.0 36 .............................. ATCCTGGATTAACTCCTAGGAAATTTACAGCAGCTA 12543 30 100.0 36 .............................. TCAAGAAAGACTAATAGAAGAACAAAAAAAAGAAGC 12609 30 100.0 35 .............................. GCAGAATTATTTTATAAGATTGAGAGCAAACAACT 12674 30 96.7 36 ......................T....... GCAAACAAATCAACAAAATTTTCTCTATAATTTGCT 12740 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 13 30 95.9 36 ATTTCAAAACTTTTCAAGTTTACAGTTCAT # Left flank : ATCATAATCTTGATTATATATAATAATATCTGTATTATTTTTATAATCAAAATCTGAAACTTCATCTTGGAGTTGACTATAATCTACCTCATAACCTTTCATCACATGTGCAGTTTTTATTATAAATTCCCCTATTTTTAAAAGGGTATCTGGATCTGCTAAAATAGCAATTTCATCTAATTTAATTGAGGTAGTATTTCCCTCTTCTGTTCCATGAATAGAAAATTTTTTCATAATTTCCTCCTTGTTTCAACAATTTTTAATTGTTTTATCAAATCTACAATTCTTTTCTTTCTAACATATTTCATTTCTATACTAGTATGTTATATAATATTTGACTCCAATTAAATGAGTTTGGTTATTTTTCTCTTTTTACTACTTCTTCATAGGAAAAATTAATATATTCAACTTATCAGTTTTTCTTTATTTTTTTACAATTTATAAATTATTTACCTTAATTTTGTTTTGTATCTACCTAATATTTTCCTAAATACCTTTTA # Right flank : TGAAATATATGTAATAGAAAAAGTTTAGAGCAAAAAATTTTCTCTATAATTTC # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.96, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCAAAACTTTTCAAGTTTACAGTTCAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //