Array 1 2066988-2067616 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE137149.1 Escherichia sp. KTE96 acHaU-supercont1.4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2066988 28 100.0 32 ............................ ACACGCAGGAAGAGATCCGCGAGGCTATCAAC 2067048 28 100.0 32 ............................ CTGCGCAACATCCACGCCGCGCCCGGTGATGG 2067108 28 100.0 32 ............................ ACGAGGTGACCTGGAATAACGCCGCAGTAAAA 2067168 28 100.0 32 ............................ TTGACCGTGCGCGGGTTCAGAACGCCGTCGTC 2067228 28 100.0 32 ............................ GCAGTCGCAGCGGCAGAGTAATTGCGCGTTTC 2067288 28 100.0 32 ............................ AGCAGTTCAATCGCTGGCTCAGGCGTCTGAAT 2067348 28 96.4 32 ................A........... AGGAGCATTTGCGGCAAGGCCTGGTTGTTGCT 2067408 28 100.0 32 ............................ ACGACGCTGTCGCGCTGGCGTCGGCGTGGAAC 2067468 28 100.0 32 ............................ AAAGTTAAAATCATAACTCAGGTTTTGAGGGA 2067528 28 100.0 32 ............................ AGCATCTGCATGGTGCCCGTGGTCTTAACAAG 2067588 28 89.3 0 ..C.................T...C... | C [2067611] ========== ====== ====== ====== ============================ ================================ ================== 11 28 98.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GTTCACTGCCGTACAGGCAGCTTAGAAATGGTGAAAAACTTTCCCCTCGGCCTGCCAGTAGTTCACTGCCGTACAGGCAGCTTAGAAATCAACCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : ATACGATGATGGCAGAAATTTAGCTGCGTTATGGCGCTCTCAACTCCGAACCATTAGCTGTGACACACAATAACAATTGTGATAATTGCGACGAGAATCAATTTCTCACACAGAAATCAATGCTGTACTAATCCTAACTCCTTCAAATAAAAATAATCACAGGATGTGTTTATGTCTTCAAATTACCTTACTCCTTCTGATCTCAAAACCATTCTCCACTCCAGGCGTGCCAATATTTATTATCTGGAAAAATGCCGGGTGCAGGTGAATGGTGGGCGAGTGGAGTATGTCACCAGTGAAGGCAAGGAGTCGTATTACTGGAATATCCCCATTGCGAATACCACGGCGTTGATGTTGGGGATGGGAACGTCCGTTACCCAGGCGGCGATGCGTGAATTTGCCCATGCTGGAGTGATGGTTGGTTTTTGTGGTACGGATGGCACGCCGCTGTATTCGGCAAATGAAGTTGATGTTGATGTCTCCTGGCTCAGTCCGCAAAG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 2081905-2082893 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE137149.1 Escherichia sp. KTE96 acHaU-supercont1.4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2081905 28 100.0 32 ............................ TCGCAGGGCTTGCGGGACCACCCACGAAATAT 2081965 28 100.0 32 ............................ GCAAAGGGTTTTCGACCATTACCCAGATAATT 2082025 28 100.0 32 ............................ GGAGACGATATCCGTAGCCGCAGACACAGCAG 2082085 28 100.0 32 ............................ GATGTGGTGAGAAAGTTGCTCCGCCAGAGCGT 2082145 28 100.0 32 ............................ AGAGGGCGCGGTCGCGCCCTTAAGGTCAAAAG 2082205 28 100.0 32 ............................ CTGGGTTATCTCCACGCTCGCCCGGTTAACTA 2082265 28 100.0 32 ............................ TGAAAATAACTTCTGATATTGTTGGCGATGGT 2082325 28 100.0 32 ............................ TTGGGCCATTGCGATAGACGCTGCCGGTATTG 2082385 28 100.0 32 ............................ GCAATAAACCGTTTGCAACACCAGAATGGTGC 2082445 28 100.0 32 ............................ CGTAGGGACGCCGTAACCGCCGATTACATAGT 2082505 28 100.0 32 ............................ TGTACCTGCGCTTGTTGCAGCGGGTGCTACGG 2082565 28 100.0 32 ............................ ATAGTGCGCAACGTGCGGGAGTCCATACAGAT 2082625 28 100.0 32 ............................ CCCAGATAGTTGATAACTTCGTCGCTGTCAGC 2082685 28 100.0 33 ............................ CCAGCCAGCATGATTCCGCGCGTTAATGTTGGA 2082746 28 100.0 32 ............................ TGACGTAATAAATGCAATGCAAATGCTCGCTT 2082806 28 96.4 32 ...........C................ TCGCTCCGCCAGTGCAACTGGTAGTAGAGTGC 2082866 28 89.3 0 ....................T..TT... | ========== ====== ====== ====== ============================ ================================= ================== 17 28 99.2 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGTGTTTTTTATTCATGGCGGATCAATGCAAAAAAAGCCCGTACTTTCGCACGAGCTCTTCTTTAAAGATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTGCCTGACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAACGGTCAAGAAGAATTTATAGAGATTGATTCGTTTGGTTACGCAATGAACATGCTGTTTGCGTGACGGAGATTATGACCGTATGTGTTCTGTTTAATTGTTTATCAAAAACTATGCAGAAAATATGAGATTGAAGAAGTAACAAATCGACCCTTTTTTTAGGTTGAAATGTAACTCATTGATTTTGTTTATTGCTATTTTGAAGTCTGGAAAAAGGGGTTGAATCTGCGATTTTGTAAGTTTTAACAGTAAATCAATCGGATAGTCTGCTATTATACCA # Right flank : AATCCATACCCAATATTTATTTTCTTCCTTAATCCCGGGCGCAAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCGTCAGGCGGCAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAGGATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGTGCAGTAACCACGTGACCGTTTTCTAACTCTACGCGGAACATGGTGTTAGGTAACGTTTCAAGAACAGTACCTTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCGTAATTTGAACCGGCAAGATAATGCCGAAGTTCTGTAAATAAGTAAAGATTTGCGCGCTAAATCGCAACAAACAGGTTTGGCACATAACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAACGGTGAGATAAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //