Array 1 248686-248108 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNBW010000001.1 Klebsiella michiganensis strain 1001254B_151014_G7 NODE_1_length_550893_cov_30.7876, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 248685 29 100.0 32 ............................. CATTTCACCGGTATCAAGGTCGGCAGTGTGGC 248624 29 100.0 32 ............................. AGTTGTTCAGTGTATTGCTCAACTTCAACAGC 248563 29 100.0 32 ............................. TAGAGACCCAGGCTCAGGCCGCTATTGCAACG 248502 29 100.0 32 ............................. GCACGCACCATTTCTCCATTAAAAATCATTCC 248441 29 100.0 32 ............................. AACGTAAACGGGCTGGGCTTTACTGAGCGGAT 248380 29 100.0 32 ............................. GAACCATTCATTATTCCGCCGCTTGTAGGTAA 248319 29 100.0 32 ............................. TCGCGACAGATTGGGGCGACCTGGTATTTTGC 248258 29 96.6 32 ............T................ CAATGGTAACAAGTGATCCGAGCGCAATCATC 248197 29 96.6 32 .............T............... GACTCACGAAACGCTTGGTTGATGTCTGAATG 248136 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 10 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AACATGCGCTGGTTAAAGCGAAAGTAGCCGTGACCGTTTTCCCGCCTTCCCCTGACGTTGCCTCTTTTAGCGGAATAACGGCGTTATTTCCCTTTATTCAACAGCCAACCCCATTACAGCAAAAAGCGCTTGAGCTGGATATTGATAAACAAGGTCCGCAATTATTTATTCTTGAAGATGTGACTGGTGCTGGAAAAACAGAGGCTGCGCTTATTTTGACACATCGCCTGATGGCTACGGGAAAGGCGCAGGGGCTCTATTTTGGTCTGCCGACGATGGCGACGGCGAATGCCATGTTCGATCGTATGTCGGAGAGCTGGCTGGCGTTGTATCAACCCGGTTCACGGCCAAGCCTGGTGCTGGCGCATAGCGCACGTGGATTAATGGATCGCTTCAATCAGTCTTTGTGGTCGGGAGATTTATCGGGTTCAGAAGAACCCGATGAGCTCCAGCCATCCAGCCAGGGATGCGCCGTCTGGTTTGCCGACAGTAATAAAAAA # Right flank : CCCGGAGGAAACGTGGCAACAGTTCAATACACGTGTTCCCCGCGCCGCCATCCTTATTATCCTGTACTTTATTTTTTCCAGCATTCTTTAGTGTGGCAAAGTCCGCTTCCAGGTAATACTTGCCAAATTTTGGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACCGATGTTTTACCGATGCTGGGTTCCGAGCCCAAATCCAACCCGTCCTGCCAGACGCGCTGCCAGATATAAACCTGGCTGTCGGCGATGGATCGCGTGCTGGCAGCCAGTAGCAACAATGGTATTAAAAAATGAAAACGCATCATGGCGACAGTCCTTGTTGCCTGATTTTATCGTTAGTCTATTTTGAGGCGGGTCTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATACGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAGCTGTACGTCATGCC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 209647-210874 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNBW010000008.1 Klebsiella michiganensis strain 1001254B_151014_G7 NODE_8_length_312189_cov_23.7263, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 209647 28 100.0 32 ............................ AGGAGCAGCTTAATCGGGAGCAGTCACAAAGA 209707 28 100.0 32 ............................ TATCAGCGCTTCGTTGTTGACCATCCGGATGA 209767 28 100.0 32 ............................ TCGAACGACTCCAGCGATTCAGAAACGGCGAA 209827 28 100.0 32 ............................ AGCAGCAGTACCGCATCGGCCTGGTAGAGAAA 209887 28 100.0 32 ............................ TGAAGCAAAGACCTGAGCGTTTCCTAGCTGGT 209947 28 100.0 32 ............................ TGGCGAGCTTATCCACCTCCTGGAAGGGCTGC 210007 28 100.0 32 ............................ CGTAGATGAATCGTAGGCCCCCGTATCGAGGT 210067 28 100.0 32 ............................ TCGTTCTGCCAGTTGAGTATTCGACAGCCAGC 210127 28 100.0 32 ............................ ATCTCCCGCAGAACGCAAAGCCTCCAGTTGAA 210187 28 100.0 32 ............................ TCACCGTCATTGCTAAGCTCACCAACCCACAA 210247 28 100.0 32 ............................ GCGGTGAAACCTCTCAGGCACTGGGAAGATAT 210307 28 100.0 32 ............................ TGAGAGCAAGGAGGCAACATGCTTAATCGTAC 210367 28 100.0 32 ............................ TCAGCCATCAGACCCTAGCGTCAGCCCGAAAC 210427 28 100.0 32 ............................ ATGCTGCCACCGTAAAAGAACTTGCTGAGGCG 210487 28 100.0 32 ............................ GTTCATATCGTTGACCACAATCAGCTGCTTGC 210547 28 100.0 32 ............................ AAATGCCAAAGCAGCGGAACTGGTAAGAACTA 210607 28 100.0 32 ............................ TGCAGGCGGAAGCATTGCCCGGCATCCAGCAA 210667 28 100.0 32 ............................ CGCCGCGAAACTGGGCCACGCCTTCAGCTGCT 210727 28 100.0 32 ............................ GTAAAAAACTCCCTACTGTGCTTTACCGGCAG 210787 28 100.0 32 ............................ AGGTGACCGAAAGGTACTTATCAGGTTCAAAC 210847 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 21 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGTTATCCATCAGGTGGTGGATAAATTTATCGTCGAGCTGCAGGTTCAGCTGGATCAGAAAGGCGTCTCTTTGGAAGTCAGCCAGGAAGCCCGCGATTGGCTGGCCGAGAAAGGCTACGACCGGGCCATGGGCGCGCGTCCAATGGCGCGGGTGATTCAGGACAACCTGAAAAAGCCGCTGGCCAACGAGCTGCTCTTTGGCTCACTGGTTGACGGCGGACAGGTGACCGTTGAACTGGATAAAGAGAAAAATGCGCTGACCTACGACTTTCAGAGTGCGCAGAAGCACAAACCGGAAGCGGCGCATTAAGTTTCGGTACTCAGTGACAAAACCGGCCTCAGGGCCGGTTTTTTTATGCCTATGTCCTGGACCCTTTTTTATTCCACTTTTTAACTTGTTGATTTTAATAAAGAGAAAATATAGCGTAAAATTATGGTGGCAGAGAGGATGTGTTGATTAATTTCAATGATAACAATATGGTAGGGTGTTGTTCGTTCA # Right flank : AAGAGCTTGCCCACACTGCTGTGCAAGCCAAACGAGTCTAAAGAAATTGCCAAAGTAATAGGTTATTTTGCAAGTTGCGATGAATGTCACCGTATTGCATCTAATATACTGTTTTTATAAACAGCTATCGACTTTGAGCCACAGGATGTGACTATGCCCGCGAAGTATATTGCCCCCTCGGATTTAAAAACGATACTCCATTCAAAACGCGCCAACATTTACTATCTGGAAAAGTGTCGTGTGCAGGTTAATGGGGGGAGAGTGGAGTATGTTACCAGTGAGGGGCATGAGTCATTCTACTGGAATATCCCAATAGCAAATACAACGGCCATTATGCTAGGAATGGGAACCTCTGTTAGCCAGGCAGCGATGCGTGAGTTCGCCCGCGCGGGTGTGATGGTAGGTTTTTGTGGTACGGATGGCACACCTTTATATGCCGCCAATGAAGTCGATATCGACGTTTCCTGGCTATCGCCACAAAGTGAATATCGACCAACGGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 219300-219567 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNBW010000008.1 Klebsiella michiganensis strain 1001254B_151014_G7 NODE_8_length_312189_cov_23.7263, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 219300 28 100.0 32 ............................ GTTATAGACGGCTACGCTGGTTGGCAGGATTT 219360 28 100.0 32 ............................ CACATATCGCCGAGAGAAAAGTCGATACGCTC 219420 28 100.0 32 ............................ TATATCCCGATCCGGGGCGGATATTCGGAACC 219480 28 100.0 32 ............................ CTGGACAGCCAATGCGACAGGTTATGGCTTTA 219540 28 78.6 0 C...........A...........TGGT | ========== ====== ====== ====== ============================ ================================ ================== 5 28 95.7 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : AATCAAAGGATGGCGTTGCGTCAGCCGGGTGCAGGTGAAAAGCAGCCCCGAGCGGCTGATGCGCCGTTCGGTGAAAAAAGGCTGGATAACGCAGGATGAAGCAGATGCGCGATTGCTTACCATGCGGGGCGAGTCGACAACACTCCCCTGGCTGAATATGAAAAGCCTTTCAAATGGACAGATATTTCCGCTATTTATTTGTCACGGCGAGTTGCGGGCGCAGCGCGTCGCGGGAACATTCAGTAGCTATGGGCTGAGCCATATCGCGACTGTCCCTTGGTTTTAGCATTTCGGTGAGAACTTTCTTGTTGAATGTTAAAACGAACCAGAACCGGCGCTGTATTTTGCGCCGGTTATTCGATCGCTACAGAAACCCTTTCTTATGATGAGCCTCTATCTTGTTGATTTTACAAGATAGTTATATAAGGGGCGGAAAAAGGGGGGTGATGAGAGTGAGGTTTTTTGATTTTAAATCAAACTTTTACGTTGTTTTGGTTTCA # Right flank : TGGATTAAGCATATGGTTATAGAAAGATAATTCGAAGCTTGCTCTCACAGAGAGCTACGGTCATGAATAGCGTGAGTTTATAACTAAATAATGGTATCAGGCAGGAATATAAAATGAAAAGACCGGGAATTATCCCGGCCTTCAGCATCTGGCGCGCTAAGCGCGAAAACGATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGCTCAACAGTCACTTTGTCGCCCGTCAGAATGCGGATGTAGTTTTTACGCATTTTACCGGAAATATGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGGAACATAGTGTTAGGCAGCGTATCAAGTACGGTGCCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAGTCCTCTGGGGTATCACTACCGTAGTTTTGAACCGGCAAGATAATGCCGAAGTTCAGCAAGTATGTAAAGTTTTACGTCAAATCGCCGAAGTAGTTTTGGCGCATT # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //