Array 1 447196-453763 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP035042.1 Halomonas sp. BC-M4-5 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ==================================== ================== 447196 28 100.0 32 ............................ GAGATCATCCCGGGCGGGCGCGTCTACCTGCA 447256 28 100.0 32 ............................ TGCTGTGGCGTGAGCTGCAGCGCGACGACGAC 447316 28 100.0 32 ............................ TTGCGGCGGATGATCAGAGAGGGGGCATCGGT 447376 28 100.0 32 ............................ TGCTCGGCCTCTCGGCCAAAGCACAGCGTCTG 447436 28 100.0 32 ............................ TCGAGCATTTCCGTTTGCTGCTTGCCTGACAT 447496 28 100.0 32 ............................ TTAAGTAAGGATGCTCCCTGGCCACGGATGGC 447556 28 100.0 32 ............................ GGCATCTCGAGGCCAATGGCTACCACGTCGGA 447616 28 100.0 32 ............................ ATCTGCCTCTCCTCGTCTTGCCGTCTTGCCAG 447676 28 100.0 32 ............................ TGCACCTGGTGTACGTGCTGAGCGAGGGCGAG 447736 28 100.0 32 ............................ AGCCACTCGGCATCCTGCTGCACGCGCTCGAT 447796 28 100.0 32 ............................ GTTTTCGGCCTCGAGCTGGGCCAGCTCCTGCA 447856 28 100.0 32 ............................ ATCAGCCCGAACTTGCCGCCGATGCGGATCAG 447916 28 100.0 32 ............................ TGACGATCAATGCGGCTGCCGATGCTCAGATG 447976 28 100.0 32 ............................ TCGCCGAGCAGGTAGTGCTCACGCTTGCTCAA 448036 28 100.0 32 ............................ TTGACTCGACCTTGCGGTCAAGAGAGCGAACA 448096 28 100.0 32 ............................ TATGGAACATCGCTAGGTCACATTGACGGCAT 448156 28 100.0 32 ............................ AAGTTCTGAAAGCAACGAACGCTGGCGGCACT 448216 28 100.0 32 ............................ TGTACTGGCAGGGGTGGCGAGTGGCACGTATT 448276 28 100.0 32 ............................ GTATTTCTTCGGATCGAAGTTCTTGGCCATCT 448336 28 100.0 32 ............................ TCCCACTTCTGCCGCTTGATCATCGCCGCCCA 448396 28 100.0 32 ............................ TCGAACGAGGCCACCGCATCCGAGGTCGCCGT 448456 28 100.0 32 ............................ ACAGGCCACCAGCCACTCTAAACTGTCGCAGC 448516 28 100.0 32 ............................ CATGTTGGCGATCCGATACGGGGCGTTCTCGA 448576 28 100.0 32 ............................ GTCAGGTGCAGGCGGTCGGACTCGATGCCGGC 448636 28 100.0 32 ............................ TCGAGCAGGTGCAGAACATCGAGGCCGGGGCG 448696 28 100.0 32 ............................ TCGTAGTATCCGGCGGCCTCACGCGTGACCAC 448756 28 100.0 32 ............................ TGGGGGCATCAAGGCGGTCGCTGCCACCTATG 448816 28 100.0 32 ............................ AGATCTCCTCGGCCGCGGCGCTCCGCGAGAAG 448876 28 100.0 32 ............................ GTCCTGCGTGAGATGCGTGCCCAGGGTACCGC 448936 28 100.0 32 ............................ TAACCCGACACTAATCAAGCGATTGGTACAAC 448996 28 100.0 32 ............................ GGCCAGCACCACCGCTTGGCTTTCGTCAGTGA 449056 28 100.0 32 ............................ TTTACTCGCAATGTAATCGATGGACTTAGGCT 449116 28 100.0 32 ............................ ATTCGGCATGACTTTTCCAACGTGACGCATCA 449176 28 100.0 32 ............................ AACTCGCCGTTACTGTCGCGAAGCTCTGCCAC 449236 28 100.0 32 ............................ TGGTGGACGCGGCCCGCAAGCGGCACTACCGC 449296 28 100.0 32 ............................ TTTGCGATGCGCTCGAGCATGTCAGCCATGCC 449356 28 100.0 32 ............................ TGCGCCAGCTTGGCCCGCGCGATCTCGGGCTG 449416 28 100.0 32 ............................ CTGTAATGGCATCAGGTGCGGCGCTGCCAGGC 449476 28 100.0 32 ............................ TATAAGGCCCGCCAGGCCGCCGCCGCGCACGA 449536 28 100.0 32 ............................ TCGGAGAGGCCGCTGAGCGGCGTGAAGGTGAG 449596 28 100.0 32 ............................ TGGCCAGGCGCTCGGGGTCAATCGTCGGTGCC 449656 28 100.0 32 ............................ TTCCCGCCTCGCCATGACTGCTTGAGGATCGT 449716 28 100.0 32 ............................ ACAAGTACCCCAAGCACATGGAGTGGCTGGCC 449776 28 100.0 32 ............................ CCGGTCCCAGCGGGTCGAACTGCTGTCCCTGC 449836 28 100.0 32 ............................ TGATGGGATCGGACACGCCGGCCGCAACGCGG 449896 28 100.0 32 ............................ ATTGACTATGTGGAGAGCATGGGCGGAGGCTC 449956 28 100.0 32 ............................ AGGGTCTTCACCTGTTCGGCCAGAGCGTCGAA 450016 28 100.0 32 ............................ GTTACGCGAACGCCAGTGCATTCTTCACGCCG 450076 28 100.0 32 ............................ CGGTTCATGTCAAGAATCAGCGCCTCGATCCG 450136 28 100.0 32 ............................ TTCACGGCAGTCAGCGCAGACGTACTCGTCGT 450196 28 100.0 32 ............................ TTGGGCATTCGTGCCGAGGCGAACATCACCCT 450256 28 100.0 32 ............................ TGCTTGTGCATGACCTCGGGGCACCAGGGGTT 450316 28 100.0 32 ............................ TGCTAAAACATGCGCGACTCATCGAGCAGTCA 450376 28 100.0 32 ............................ ATGGAGAAAACCGGATCGACTGCCATCGCAAG 450436 28 100.0 32 ............................ ACTTCGCCATGCTCCTCATGCAAGACAATGCA 450496 28 100.0 32 ............................ TCAAGCGCCATGGCCTGGGCCGTATCGAGGGC 450556 28 100.0 32 ............................ TCGTCGCCATCTCGATCAGCAAGGGCTTTATC 450616 28 100.0 32 ............................ ATCGAGCAGAACAAGCTGCAACGGAAGTGGTG 450676 28 100.0 32 ............................ AGTGGTAGGCGGCTGATGCGGTCCATCTTCTC 450736 28 100.0 32 ............................ TGTCTTACTAAATGAGATAGGGGCTGAGAAAA 450796 28 100.0 32 ............................ TGCCTTCGTGTTCTTGGGCGCATCTGGCCCTA 450856 28 100.0 32 ............................ ACCCGACCTTGTGGACGCAGCGGTACAGCAGT 450916 28 100.0 32 ............................ TCGCCCTGCTGAGTGCAGAACCATACCTGCAT 450976 28 100.0 32 ............................ AGTTCTGCCAAGTCACGTGCGCATGACGCACG 451036 28 100.0 32 ............................ GCGACCCGAACCGACCCGTCGAGCATGCCAGC 451096 28 100.0 32 ............................ TGGTGGAGCGCCAGCGACGAGCTGAAGCGGGA 451156 28 100.0 32 ............................ ACGCTCGGCGATGGAGGCGATCTGATGCAATC 451216 28 100.0 32 ............................ AACGTGGGACGGTATGTCGTCAACCGCTATGA 451276 28 100.0 32 ............................ ATCTTGACGCCTGCCGTCCAGTCGCCGCCGCC 451336 28 100.0 32 ............................ GCCACCCGCTGGCCGAGGAGCTGGTGCTCGAG 451396 28 100.0 32 ............................ CTGGGAAAGGTCGGCTATCAGGCGCTCAAGCA 451456 28 100.0 32 ............................ TGGCCGATGCGAGCTTCAGCGAGAAGCTGGAC 451516 28 100.0 32 ............................ ATTGCCACCTGAGCCAGAGTAAGTTCCTCCAC 451576 28 100.0 32 ............................ ACGCGGGCGGGCATGGCCACACGCAGCTCCTT 451636 28 100.0 32 ............................ AAAGCCCGAGGCGAATCATGAACCCCTTCGCC 451696 28 100.0 32 ............................ ACGTATTGCCTGGCGAACTTATGCCGTTAGGC 451756 28 100.0 32 ............................ CGGAAGAGCTGACCGACGCCCCCGATAGCCTT 451816 28 100.0 32 ............................ AGATGATCGAGTCGGCGCTTGCGCATCATGAG 451876 28 100.0 32 ............................ TCGGTAATCATGGCGCGCACCTTGGTTCCGTC 451936 28 100.0 32 ............................ AGCGGCGAAGCTGCCAGCCTGTTACCGGAGCG 451996 28 100.0 32 ............................ GTCATCTGGATGACGATCGGGCGCAGCGTGGC 452056 28 100.0 32 ............................ ATAAACGCCAACAATGGCCTCACTGGCGGCGG 452116 28 100.0 32 ............................ AGAGAGGCCGCTCGTAGGTTGGAAGAGTTGAC 452176 28 100.0 32 ............................ TTATCGATCGAGGCACTTACATCGTCGATGAG 452236 28 100.0 32 ............................ TACCGATGAAGGCGGTTACGGTTACACGCGGC 452296 28 100.0 32 ............................ TGTCGTTCTAAATCCTGGTCTTCCGTGCTGAC 452356 28 100.0 32 ............................ TTGAGAAACTGCGCCGTACTGCCGTCCGGGAG 452416 28 100.0 32 ............................ CTGGAGCGGCGTGCCGAGGACCTGCGCTACGT 452476 28 100.0 32 ............................ ATCAGCCGCATGAGCAGCTGCCGGCGCTCCTC 452536 28 100.0 32 ............................ TGGATGGGCCAGCGGCGTGCCAGCCTCTTCCA 452596 28 100.0 32 ............................ GCCGAGGACGAGGTGCTGTTCTACGCCGAGGA 452656 28 100.0 32 ............................ ACGCAAATTCGAGGAGGTGATGGTGGAATACC 452716 28 100.0 32 ............................ ATTGCCGAGTTCGCCCAAGGCGAGCCGGTCAG 452776 28 100.0 32 ............................ ACATGCGGCAACGCCATTAGCCGTATCGCCTC 452836 28 100.0 32 ............................ GGGACCACGCGGCGGCAACCGCGCCCGGATCT 452896 28 100.0 32 ............................ ATGGCGACAGCTTGAGCCAGGTATTCGCCGAC 452956 28 100.0 32 ............................ TGGAATGCATTGGCGAAGAGCAACTGGCGTTA 453016 28 100.0 32 ............................ CTGGGAATAAGCCCGGCCCGTAGGCCGGGAAG 453076 28 100.0 32 ............................ GGATCAACGCGGCGGCAACCGCGTCCGGTTCA 453136 28 100.0 32 ............................ AACTGGTTCAAGGAAAAGCTCGGCATCAACAG 453196 28 100.0 32 ............................ GTGTTCAGCCCCGAGGTGGGGCTGGCCCAGAG 453256 28 100.0 32 ............................ ACGACTTGTCACCGACCCGGCCACCGGCGAGC 453316 28 100.0 33 ............................ AAGAAGCTGCTCAGCGGTTTCTGCGGTGATGAA 453377 28 100.0 26 ............................ TTTCCGGCACCGCCAGCCGCGCGAAC 453431 28 100.0 32 ............................ ACAAGCCAACCGAAGAGGAGGACTGGTGCAGC 453491 28 96.4 32 .............T.............. TCCAGGGTGTCGCACAGCACCGGGGCCACGGC 453551 28 96.4 32 ...............A............ AGGGCAGCAGCGAAACGGCATAGCGAGGGGAA 453611 28 96.4 33 .............T.............. TCGCGGGCTGCCCTGCGTACGTAGGGTTATGGT 453672 28 96.4 36 ...............A............ GGCACGCGCGGAAGCTAGGCCGCTCAGGGGCTTTCG 453736 28 85.7 0 ...............G......A..C.G | ========== ====== ====== ====== ============================ ==================================== ================== 110 28 99.7 32 GTGAGCTGCCGCACACGCAGCTCAGAAA # Left flank : CGCGATTAGAGCAACTGATGGTGATCTCGTGGCTCACTGGCATGCGTGATCACATCACGCTGGCATCTATTCAAGCTGTGCCTGCCGATGCAAAGCACCGGGTCGTGCGGCGCCGACAGTTCAACACCGGAGGCCCCAGCCGAGCCAGGCGGTATGCACAACGTCACGGCATCGAATTTCAAGAGGCGCAGCGCTTGATGGAGGCACCTGCCGCCCGGCAGATCGCCCTGCCTTTCGTGCAGGTCAGCAGCCGCTCAAGTGGTCAGCGGTTTGCGCTATTCATCGAGCATGGCCAGCCGCAGTCTCAGCCTGTCGCAGGCAGCTTTAATCATTACGGACTGAGCAGCGAGGCTACGGTGCCCTGGTTTTGACCCTTTTCTAGAGAGGATTCTTAGTTCCAGGAAAATCAGTTTGTTAGAAGCGCCTCTCTGAAAAGGGAGGCGTTGCTCTTTGGAAGCATTGCTCTTTAACAATCAATCGCTTAACTTGAAACTGTTCTA # Right flank : GTATTGCTATCAAACTCCTCCGTATCGATCTCCGCCTGCAGCGCTTCGCCGTAGCGGGCGCCAGCGACCTGGTCCGGTGTCAGGATGGCGCTGAGTCTTTCCAGGGTGGTGGCGTCCAGGCGCAGGTCTTCGGCGGCGAGGTTTTCGCGCATGTGGGCGATGGAGCGGGTGCCGGGGATGGGGAGTACGTCGTCGCTCTGGGCCGTGAGCCAGGCGAGGGCGAGCTGGCCGGTGGTGACTTCCCGTTCGCTGGCGATGGCCTGGAGTTTTTCCAGCTGGCGCAGGTTCTGCGGCAGGTTGTCGGTGCTGAAGCGCGGCATGCCGTGGCGCACGTCGTTCTCAGTGAGCTGGTTGGCGTCGGTCACGGCGCCGGCCAGGAAGCCGCGCCCCAACGGGCTGAAGGCGACCAGTGCGGTGTCGGCTTCGCGGCAGGCGTCGAGCAGGGCGATCTCGGGGTTGCGGGTCCACAGCGAGTATTCGGATTGCACGGCGGCAATGGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAGCTGCCGCACACGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCACAGGCAGCTCAGAAA with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //