Array 1 203106-204534 **** Predicted by CRISPRDetect 2.4 *** >NZ_NCMT01000009.1 Klebsiella pneumoniae strain COL-Kpn40 contig_6_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 203106 29 100.0 32 ............................. CTTGAGCAAGGCGCTTTTTCTCCTGGGTGACA 203167 29 100.0 32 ............................. TTCGGAAAGTTCTTTTTCAGCTGATCCGTAAC 203228 29 100.0 32 ............................. TTTACGGAATTGCTTAGGTCGCGAGAATGTCG 203289 29 100.0 32 ............................. TAGTCATTTGCCGGTGACGGGAACCCCATAGC 203350 29 96.6 32 ................T............ ATTAAATAATTCGTTTACGTCCATGACGAGAT 203411 29 100.0 32 ............................. GACACCCGCACGCGCCGGGCAGGCGTGGAACT 203472 29 100.0 32 ............................. TCGTCGGGTTTATTGAGTATTCCGCCTGATTT 203533 29 100.0 32 ............................. CAGGTCAGCGCAATGTTCCGGGATATCGAGGA 203594 29 100.0 32 ............................. ATGACAAAACCAAAATTGAGTTTTGGCTGCAG 203655 29 100.0 32 ............................. AGGGTTTCGATTTTATCGGGATAGAAATGAAT 203716 29 100.0 32 ............................. TGGCGGACGTTGTACCTGTGAGTTAATTCTTC 203777 29 100.0 32 ............................. ACCGCTCCTCTGACGCCAGGAGGGTGTAGGAG 203838 29 100.0 32 ............................. TCCAGGGGCAAAGAATTGCCCATTATCGTACA 203899 29 100.0 32 ............................. TTTGCAATATCTGCCTGCGCCGCCGCCAACGT 203960 29 100.0 32 ............................. CTCGGATAAAATGCCTTGCATGAGGCGAACGA 204021 29 100.0 32 ............................. GCGTCCAGTTGAACCCGGCACATTCCCGCTGG 204082 29 100.0 32 ............................. TACGCAGCCGGATCCAGGAGCGCATGGACGCT 204143 29 100.0 32 ............................. GCACGATATTCAGCATCATCAGGACGGTTCAT 204204 29 100.0 32 ............................. ACCTACCAGATCCACACCGGGCGCTGCGAAGA 204265 29 100.0 32 ............................. TCACGCCCAGGGCTTCCTTTGCGTTCCGAAAA 204326 29 96.6 32 ........T.................... CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 204387 29 96.6 32 .....A....................... TGCGTCACGACGCCGGCGACAGTGACATCGTC 204448 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 204506 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 24 29 98.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCACAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCGGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //