Array 1 201747-202196 **** Predicted by CRISPRDetect 2.4 *** >NZ_LYST01000039.1 Gilliamella apicola strain wkB171 Gilliamella_apicola_wkB171_contig44, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 201747 29 100.0 31 ............................. TGCGCTATCGCCGGTATGTGATGGATCGTAA 201807 29 96.6 31 C............................ CACAATTGCAAGGCGGCGCAATGGTCCAGAG 201867 29 100.0 31 ............................. TGCGTATGAGGAATTTTTGACTGAAGCAGTA 201927 29 100.0 31 ............................. GATAACGCCACCAACGAATGGCGCTAACGTG 201987 29 100.0 31 ............................. TGGCAGAATAAACGATAACAATGATTGACCA 202047 29 100.0 31 ............................. ATGGTTTATTCTGACAATATTCGTCTGCAAG 202107 29 100.0 31 ............................. ACGATAACCTTGATCCATAATGTAGCTATTA 202167 29 86.2 0 ..................C.......TTT | A [202190] ========== ====== ====== ====== ============================= =============================== ================== 8 29 97.9 31 AGTTTAACGCCGTGTAGGTGGTTTAGAAA # Left flank : TTACGCGATGGTAGAGAGCAAGCGCAATGGCAATGCTTACTTGAACAAGTCCATTGTGCTTTGTATCTAAAATGTCATCAATTAGGTGGTCTTCCTTCTGCAGAACATGGTATTGGTACTGCTAAAGTTAACTATTTTAAGCAGGCCATACCAGAAGAAAATCGCCAATTAATGCAAGCAATTAAACAGCAGTTTGATCATAAAAATATTCTTAATAATCAGGTTTATATTTTGCAAATTTAGATGTTTTTTATTTTTAATTTACTAAAAAGTCTTTGATGATAATCAAAGACTTTTTGTTATTACCTAAAGCAAAGACCTACTAATAAAAATAGGGTAACTTTACAAGTTCAATAAACATCATGACAAAACCCTTTTTTTTACTATAATTTAAACTTGTTTATAATCAATAGGTTAATTTTTAATGTAAAAAAAGGGTTTTTAAGCCTAAAACAAAGATTTATCTTTTGCCCAACAAGCGTTATAGTGTATTGGTTTCT # Right flank : TTTAAAATTCCATTTAAAGGATGGGATTAACGGTTATGCCAGATTTATCTGAGTTAGATAAGTTGTTTTTGTAATCATTTTAAGGTTATGAATCATCCCTTTACCAATTGCGCCATATTGTTTTATTTATATGATTAAATTAAGTATTCTTGAGTTTAGTCTCTTGCTTGTTTTATGATTTGATAATTTTAGTATGTTATTTGGCCTACATTAAATAGTGAATCTTGGTGGTACACATTACTCTGCTTATTAAAAGGTATTAACTTGTGATGCAGGGCGTCATAAATGCAAAATCTTGTTAAATCCTTTATCAATAATTAACATTCTGGATGAGGTTTTTGAGTACAATTTTTAAGGGATATATGCTAGAGTTGAATCCCTTATTTTTCGACTCAGTAGGGAGGTAGGTCTTGAATCTTTCACCTAAAGCGTTTCATTATTTGGGCGTAATTGCTACTATCGCTTCACTTGGCATGTATGTTTCTTATATTCCACAAATC # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTTAACGCCGTGTAGGTGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.40,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 206840-207466 **** Predicted by CRISPRDetect 2.4 *** >NZ_LYST01000039.1 Gilliamella apicola strain wkB171 Gilliamella_apicola_wkB171_contig44, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 206840 28 100.0 31 ............................ TTGTTAGACTGACTTCGTATTCAGTCTTAAG 206899 28 100.0 32 ............................ ACCAAACTCGCTTATAACTCGTATATCAATGA 206959 28 100.0 32 ............................ AGTCGGTGTAGGCTTACCCGCTTATGCATACT 207019 28 100.0 32 ............................ ATGATCACTTGCATGGGGAGTTGATTGTAACG 207079 28 100.0 32 ............................ ATTACTAACTTGGTAATCAAGAAAAAGCCGAT 207139 28 100.0 32 ............................ AAATATCGAGCGACAATTGTTGGCTTTACAGA 207199 28 100.0 32 ............................ ACAGCCAACATATGTCATGAACATAAACCCTG 207259 28 100.0 32 ............................ AAGTGTCAACATGATAACGACTGTTGCTAGAG 207319 28 100.0 32 ............................ ACACACGGCAATTAACAACAAGAGATCACTTA 207379 28 100.0 32 ............................ TCGCTAGAACTGTTCGAAATTTTCGGGTGCTC 207439 28 71.4 0 .................C..AAGTA.TG | ========== ====== ====== ====== ============================ ================================ ================== 11 28 97.4 32 GTTCACTGCCGTGTAGGTAGTTTAGAAA # Left flank : GATATTTTATTTCAAAATAATTATTATTTAATGATATTATCAGGATAATAAACGTTGAAATCAACCCTCCAAGGGGATTGATACCTGTTATTTTTTATATAATCAACTGATGACAATTGCACAATTGTTTCTTGGATAATGCTAAATATCAATGCTCTGCGTGTATAACTTATTTTATATATCATCGGTCATTTTTTATATCGTAGATTACAAGATAATTAAACCTGTCAGCATTGCTAAACAGCAATTCTCATGACTGAATTTATATTGAGTATCAAGCTATGGATATTTTGCCTAAAAACTTCGCGACAAAGCTGTTTATAAACTCACAATTGAATGCTAACGCGTATACGACTAACCCTTTTACCAACCCTTTTTTTTCACCAGATATAAAAAATAATAAAATCAATATATTACAAAGCACATAAAAAAAAGGGTTTTTTAGTAGCAAAACATCATTTACCTTTCTGCCAACAACAGTTATAGTGGTTTAGATTCTA # Right flank : GTTTAGTCTTGAAATTGTGATATTTTGCAAGGCTATCTTTTATTCGTGATATATTGCTCTTGATTGGTTAATAAATACCAGAAGATTTTCAGTTAATAATTATTGCTGATAGTTGGTTAATTTGTTTATAAAACGATAGAACTAAGTTTTTATATTCGTTTTGGTTGACACCTGTAAAGCCGGTATCAACCTTGAATAAGCTAGGGTGTTCGCATGCGAACAATATTTTACTTATCTATGTCAGAAATTTGTGTTTACTCCGCAAATTTATTTTTATGATCATACCGGTTGTAGTGAATGTCATCACTAATCAAATAGTTATAAATGTCATCGACAATTTCGATACCATTTTTTAGGTAGTCTGCTTCACGTTTTTTGCCACGTTCACCAGGAAAGAATACTTGGCTATTGCCTTTAGCGGGTTTGACATTTTTTAATTGATCGAGCATCGAAGACATAGTTTGTTTGAATATTTCAAGACCGATAAAATATTCTGGGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGTAGTTTAGAAA # Alternate repeat : GTTCACTGCCGTGTAGGTAGTTTAGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGTAGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.20,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 91548-90619 **** Predicted by CRISPRDetect 2.4 *** >NZ_LYST01000043.1 Gilliamella apicola strain wkB171 Gilliamella_apicola_wkB171_contig48, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 91547 28 100.0 32 ............................ TGCGCACTAAAAGTGTGGCAAATTGTGCAAAG 91487 28 100.0 32 ............................ ATACTTGAATCAGCCAATGAGTTCATAAACTC 91427 28 100.0 32 ............................ TGTGCAAATTGTGAAATTAAAATCCACAACTT 91367 28 100.0 32 ............................ CATTATTGCAAGATGTAAACAAAGGTTGGTTA 91307 28 100.0 32 ............................ TAAGGATAATCCAGCAATTATCATTGATCATG 91247 28 100.0 32 ............................ CAAAGAATTGGGCGATGCAACCGAGGCTGGTA 91187 28 100.0 32 ............................ ACTTTATGATGAATGGTGGAAACATCTTAGTA 91127 28 100.0 32 ............................ GCTGCATCAATTAATTTTTTGAATTCAGTTAA 91067 28 100.0 32 ............................ TCTTTCAAGCGCTAAAGATCTGCTTAACTATT 91007 28 100.0 32 ............................ TGCACCGCCGAATGGCTCAACATAAATAGAAT 90947 28 100.0 32 ............................ TGTTGCTGCAGATGCTATTTGCTGATTCAATT 90887 28 100.0 32 ............................ AAGGAAAAAGTAGAGCAGATTAAACAACAAAT 90827 28 100.0 32 ............................ TCTTCGACATCAAAAATTATCATACTATTCTC 90767 28 100.0 32 ............................ GATTGCATATATAACTAGCGTTAAAAACATAA 90707 28 100.0 32 ............................ CGACTGCCCTATTGGCGTTCGGGTGAGAAATA 90647 28 89.3 0 .................C..A...A... | G [90626] ========== ====== ====== ====== ============================ ================================ ================== 16 28 99.3 32 GTTCACTGCCGTGTAGGTAGTTTAGAAA # Left flank : TACCTAAGGTTAGGTGATATTTACAAGATTTCTAAACTATTTATACGGCAGTGAACTTAGCGGGTCGAGGAGGTCAATTATCTCGAATTTTCTAAACTACTTACAGAGTAGTGAATAAAAATACAGACTAATAGTAAAAATTACAGAGTGTTAATTAATTGTCCTATCTTGGGTATGAATAAAATCAATGTTAAAACGTCGAACTTATTTATTACGTTAGTCACAGGTTATCAGCAATATATTATTGATTTTATTTTCTTACTGTAACCAGATTAATTGATTGATTTCTTGCTAAGAATTATAAGGGTATAAATAAATTTTAGTTTTATTACAGCTGAATAAATAAAACAAAAAATTCCCCTTTTTTTAACCCTTTTTTTTCGCCCATTTTAAAAGTTAATAAAATCAATAGATTAAAAATAGCTACAAAAAAAGGGTTTTTAAAAGCAAAAATATCATTTACCTTTATCTGAACAACGATTATAGTAGGTCGTACTCTA # Right flank : TTTTACAGAAATTTAGTTGTGATTAATATCTGGTTTACAATCATTTTATACCTTGGATAAACCAAGGTAATCTTCTTCCTATTAATTATCTCATCATCATTTAAAATTATCTAAATCGATCATAATCCTATCTCGCATTGATATTCTGTAAAGAAGTTTAATTTAAGCTATATGTTATGATATAAAAAAAGTCGGATCGAATCGGATCAATGATCCTTAAAAAAGATCCAAGTTAGATCGTTTTGATCTTTACCCATTACTGATAAATTTTTTAAAAATTAAGCAATTAAAAAGTTTTTATTTTAATTTATTATTTATTTTTTATCTAAGTTATGTTATCTTTTTGTGCAAATTTAGTTCAACTTTAAAAAGGGTAATATCTCAATGAAATTAGCTTTTCGACCAACTGATAGTTGGCGTTGGTATTTTGATAGTGATTATGATAGCTTGATGCTTGAAGTATCGCCCGAAATGCTATTTCGTTCATGTTATCCTAGTAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGTAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGTAGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.00,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 250923-250535 **** Predicted by CRISPRDetect 2.4 *** >NZ_LYST01000043.1 Gilliamella apicola strain wkB171 Gilliamella_apicola_wkB171_contig48, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 250922 28 100.0 32 ............................ CGAAGCAGAAACCAAAAACTAATCTTTTAACT 250862 28 100.0 32 ............................ ATTTGACATGAAAGGAAAAGAGTTACACGAGA 250802 28 100.0 32 ............................ ATCCGCCGATTTATAGCTAATAAAGAACTGAT 250742 28 100.0 32 ............................ ATTTATGCCGGGTAAACGAATTGTGGCAACCA 250682 28 100.0 32 ............................ CAAGATCCTCGGATCTGTTCTAGCATCCACTC 250622 28 96.4 32 ..........................T. GTTCATTATAACCCGTCTTTTAAAAATAAAAG 250562 28 85.7 0 .........T...........CA.A... | ========== ====== ====== ====== ============================ ================================ ================== 7 28 97.4 32 GCTCAATACCGTGTAGGTAGTTTAGAAA # Left flank : AACATAAATATATTTAAGCTAAACTAATAGAACGACTTCAACAATTTCAATACTTTTGCAGTAAGCGATCTTAATATACCTAATGCACTGTTTCAATGTAATGGTCATAATGTGCAGCTATCCATATAAACTCAAAGCTAACAAGAATATTTGACACACTCCCTTAACGTTGCGATTTAAAGTATATTTTTGTTTATCAATGGTAGTTGTTACTGTTTTGAATAAAAAGCAATTGATGTATTTTTAATATTGTTAAATAAATTGTCGAGCAGAGTAATTATAAATTGTAATTTGTTCGCATTAGATTTCAAACAGCCTGTTTCAAGTCAATATCATTGAAACATTATCAATAATTACCTACTTATTTTTACCCTTTTTTTTCGCTAGATTTAAAGATTAATAAAATCAAAGTATTAAAAAACAGTTAAAAAAAAGGGTTTTTAAGTAATAAAACAATATTTACCTTTATGCCAAAGGCGATTATAGTATGTGCTGTTCTA # Right flank : AGCAAAAATTTGAGGAAGTAGATTTTTACAGTTTAATAGCCTATCCGCAGGAAGCCTTTAGTTTAAGCATATAAAAATGCCCTAAAGTATTTTATTAAGATAAATGGGTTAAGTATGAAATTGTAATTATGTGCCTTTATTTCAACTTTATATCAACTATCACCTAGCTTGTTTCAGCTAATAGCCACACATAAACAGACATTTTGATGTGCTTTAAGCAACACACAATTAATACATAGGCCCTTAACATTCGCGGCATATATTCTTTTTTTGTATTCAGACAACTCAATCTTGTTAAGTTCAATATAGTAAAATATCTGCTCAAAAATTCTGTTTAGACTGATTATTAAATACCTTTACCACAGCTTATTTTTACAATTTATAAAAACAAGAAAGATTAAGCTTTATTAACAATGAAGGTAAAATTTTTGTCTGTTTGTTAAGTATTGCTAAAATGTCTTAGGTAGTTGAATGATAAAAATCAACAGTTAATTGATTAA # Questionable array : NO Score: 3.13 # Score Detail : 1:0, 2:0, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTCAATACCGTGTAGGTAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //