Array 1 41462-41073 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTEY01000002.1 Gilliamella sp. Pra-s52 NODE_2_length_328737_cov_173.041971, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 41461 29 100.0 31 ............................. TCAACCAAATGGAAGGGGATATGCATAATTT 41401 29 100.0 31 ............................. AAGTCAATATTACCCTCGGCAACATTTGTGA 41341 29 100.0 31 ............................. CGTTTTTGGTCACTTTTTGCTTGAATTTCTG 41281 29 96.6 31 ............................A CTCAACCCTTTGTTTTTAGCTGTTAGCGTTA 41221 29 100.0 31 ............................. GCTTACGCAGAGGATTTATTATCAAGTGGTG 41161 29 100.0 31 ............................. GTGCTAATTGGGCATATGGAAAAACAAAGTT 41101 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= =============================== ================== 7 29 99.0 31 CTTTAACGCCGTGTAGGTGGTTTAGAAAT # Left flank : TCAAGTCAGTAGCCTCAGCACTTCCAGCAGCGGATATGCTGTTTGCACGACACCTTAGTTTTTAACATTTATTTCTTAATCCTTAGGGCGTGGTGGTAGTTATGGTGCAAATAGAGGTTAATATAGTAAAGAATAAAGCCCTAGCATAAGTTGGGGCATTACCTTAGAATTGCGTTGTTTTGTTAAATCACCTACACGGCGTTAAAGTTTGCGGTGCTTTAGCTATGACTGTCAGCGATTTTCTAAATTGCCACAACAGCGCTATCCACGTCAAACAACTAATCACATTTACAAATAAAAAGTGTTTACAAAAAATATTGATTTTATGTGATTTATTTTTTAGGTATTTTCTGAATACAACCCCCCACAAACCCTTTTTTTAACGATAACTTAAAACGCAATAAAATCAACATATTAAAAAATATCTCAAAAAAAGGGTTTTCAAAGCTAAAATTGTCGTTTATCTTTATACAACAAGATTTATCGAATCTTAAGTTCTA # Right flank : ACTTTTCTCAACATCAAGCACTTTTGATATTCTTTAACGCCGTGTAGGCGAAGGACATTATTTTTCACAAAAATTAGTCAGAAAAGGTATTGATTTTATTGAAGTTTTTATTAGTTGTTTTTTTGATAAAAAACAGCACTCTTATCTCCAGATCACTTCTCTTTGAATTTTATTACTTTTATGCCAATTTTAAGTATATAATCGGTACAAATCCCTCTACTATGTATTGTTATGACTAAGATATCTTCGTTTCGTCAAAAACAGAGCATTATTTTTATTGCTTTTTTAGCCACTACGTTTATTGTCGGTATTGCAGGGGCGTTGCAATCGCCTACGTTAAGCCGTTTTTTATCGTTTGAAGTAAATGTTAATCCCCGTTTGGTGGGGCTGTTTTTTTCGGTGAATGCGTTAGCAAGTATTATTGGTAGCTTTTTATTAGCTAAATATTCAGACAAAAAAGGCGATAGGCGACATATTGTTATATTTTGTTGTTTAATGGG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACGCCGTGTAGGTGGTTTAGAAAT # Alternate repeat : CTTTAACGCCGTGTAGGTGGTTTAGAAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.40,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 86630-87077 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTEY01000004.1 Gilliamella sp. Pra-s52 NODE_4_length_177032_cov_154.312099, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 86630 28 100.0 32 ............................ AATTATAGCAGAATTATGCAAGCATTATGATA 86690 28 100.0 32 ............................ GTTAACAGCGGGTTAAATCCTATTGTTCAGCT 86750 28 100.0 32 ............................ TGGTACGATAAATATTCGGAAAGTATAGTTAC 86810 28 100.0 32 ............................ TCGGGTAGTATTTGTAAATCATCATTACTAGC 86870 28 100.0 32 ............................ AATTTGGGATGGTACACAGTATACTGCGGTGA 86930 28 100.0 32 ............................ ATGACGCCGGAACGACCGTTTGGTGTGTATTG 86990 28 100.0 32 ............................ ATAGTCGAGAACCAATTTTTTTATCGCTGAAT 87050 28 92.9 0 .C..............A........... | ========== ====== ====== ====== ============================ ================================ ================== 8 28 99.1 32 CTTTAACGCCGTATAGGCGGTTTAGAAA # Left flank : TGGTAAATCGTCTAACAAAGCATCGTGATAAGTGATCATCTTCTTTGTGGTAAGTGATAAAAGGAGATTATTGTAGTTTTATTATGTGTTATAGGCAATAAGGGATATTTTGATTAAAAAACAAATAAAGGTTGATGATGATTTTTTCATTTAAAAAACCAAATAAAATCAATGCCTTTCCTGACTGTTTTTTTATGTAAAAAACACATAAATTACAATCACACATTACAACCAAACAAAGGTATATTTAATTATAGATTTTATTTTTTGATTTCCTAAATTTAAAAAAATCGTATAAAAATCGGTCAGGAAAGGTATTGATTTTATTAAAGTTTTTTCTGTGCGTTTTTTTGAACACAAACCTCTCCAAACCCTTTTTTTTACGATAATTTAAAACTCAATAAAATCAAAATATTAGAAAACAGCTTAAAAAAAGGGTTTTCAAAGGCAAAATTGTTGTTTATCTTTATATAACAAGATTTATTAAATCTTGAGTTCTA # Right flank : ACGGGCACATTTGGCAACAGCTGAGCACAGTGAAGATGGCATCGTAGAGGGAGTATCAGGATGATACGAGTAGCGTAGCCGAAGGCTACATTCTGCAGCCTTGCGAGGGTTTTTAGGGGATTTCGCAAAAAATCCCCTAAATCGGATGTGATCACAACAGCTATTTTATCCACCCAAAGCCTAAACGTCCGAAACCACGGCACACAACCCATTTTATGCACTAACAAAAAAGAACTATTTTGATAAAAAAGCGGTCAGGAAAGTTACTGATTTTATTAAAGTTTTTTTGAAAATTATTTTAAGTAAAATCAGCTGTTTATATAAACTCGTATTAATCAATGGTTCAAATAAGAGATAATTTTGCCTCAAATTTTTCAAAATAGTACATCTATTTATTTCATATTTGAAGTTTTTAAAAGCGACATAAGTCGCTTTTAATCTTTGAATGAGTCAGTCCATTTTCCTGTATTAGTTGGTTCACTAGTTGTTAGTTGTTAGTT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACGCCGTATAGGCGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 295445-295955 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTEY01000001.1 Gilliamella sp. Pra-s52 NODE_1_length_470091_cov_175.782050, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 295445 28 100.0 32 ............................ AATTGATGACTTACGTCTCGCAATGCTTCAAG 295505 28 100.0 32 ............................ GTTGCCAACGTTGAAAGCAAAGCTACATTAAG 295565 28 100.0 33 ............................ AAAGAAAAAAGCTCAATTAAGAGCCTTGAGGGT 295626 28 100.0 32 ............................ TATGATTCCGTAATGAACAGTTAACGCAACGC 295686 28 100.0 32 ............................ TCGCACCTCTACTTATTTTGGTCAAGTAGCAG 295746 28 100.0 32 ............................ TGAACTCCAAAGAATGATTGCTGATTTGCAAA 295806 28 100.0 32 ............................ ATCAAAGCAATACGAATCAAGCCAAAACTGTT 295866 28 100.0 32 ............................ TGATGTGACAACAAGCGATGCCGTTTTATTCA 295926 28 96.4 0 ........................A... | AA [295947] ========== ====== ====== ====== ============================ ================================= ================== 9 28 99.6 32 CTTTAACGCCGTGTAGGTGGTTTAGAAA # Left flank : ATTGCTGGCGACATCATCAGACAAACCCCAGCAGATATTGTTTATCACCGTATATCTGCTAACGCCAGAAAGCCAACCTTACTTGCGCCAGAATGGTGTGAAAACCACTGGCAATCAATGAATGCCGTTGATCATAATTTGCGTCAATATGGTGTTCAAGGCAGCGCCATTGGGGATGAGTATTGTTTTAAGGGATAGGGAAGTGATTTTTTAAAACATGATAAAATAAAAATTTTAATAAAATCAATTGCATTTCTAACTTCTTTTTTATAAAAAAGCATGCGATTACTGCCTAAAAATTATTTAGAAAAAGTGTTAATTTGATTAAATTTATTTTCTGTCTATTTTTTTTAAATGCAAAACTCGACGAACCCTTTTTTTTACGATAATTTAAAATTCAATAAAATCAAAATATTAAAAAATAGCTTAAAAAAAGGGTTTTCAAAGCCAAAATTGTTGTTTATCTTTATATAGCAAGATTTATCAAATCTTGAGCTCTA # Right flank : AATAAAATTAATCAGATAATTATAAATAATAATCGGCTATATTGTCTGTCGTATTTCGGCGTCAGAATGTGCCGACAACAGAGCGAGGTTAGCACGCTAAACAGGATGTTTGGCGAGGCTATTCTCTGTCTGGAGCGACAAATTTGTCTGGAACAAATTTGAACATCTGAGCATAGCGAAGATGGCCTCGTAGAGGCGAGTATCAGGATGATATGAGTAATCCCACAAACGGGTGCGTTAAGAGCGAGCGACGGCGGAGGGTAGCCGTAGACCACATTATGCAGACAATGCGTGGGGTTTTTAGGGGATTTTGAACTGCCCCCCAAAATTGGACGTGACCACAACAGCTATTTTGATCACCAAAATCCCAAACGTTCGAAACTACTATACCAATCCACTCTATCAACCAACAAAAAAACATTATATCCCACACAAAATTGTCAGAAAAGATATTGATTTTATTGATGTTTTTGTTTTGTTGTGATTTTAATAACTTAAAT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACGCCGTGTAGGTGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.40,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 424399-424607 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTEY01000001.1 Gilliamella sp. Pra-s52 NODE_1_length_470091_cov_175.782050, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 424399 28 100.0 32 ............................ GATATGCCGAATTGGTTTCTATCTGTCAGTTT 424459 28 100.0 32 ............................ GTTTGGTTGACTGGTTAGCTGATTATTACGAT 424519 28 100.0 32 ............................ AAAAGGCGCTAGAGTAACTATAAAATACAACT 424579 28 89.3 0 ....................AA..A... | C [424599] ========== ====== ====== ====== ============================ ================================ ================== 4 28 97.3 32 CCTTAACGCCGTATAGGCGGTTTAGAAA # Left flank : TTTGTGAACAAAATAGCTACAGTGACAACGTCCGAGTCAGGGAATTAAAGCGAATTCCCTGACAACCCACGCTTTGGCTGCTACGGCTAACCCTCCGCCGTCGCTCGGTCTTAACGCACCGTTTGTGCAATTACTCGTATCATCCTGATACTCGCCTCTACGAGGCCACCTTCTCTATGCTCAGGTGTTCAAATTTGTTCCAGACAAATTTGTCCGACGCCGAAACAAGACAACAACATAACCTTAGGTCTTTTTTGTGAGTTGTTTTTGTGTTAAAAAGCAATGCAAAAACCCCAAAAAAGTGGTCAGGAAAGGTACTAATTTTATTAAAGTTTTTTCTATCCGTTTTTTTGAATATAAACCTCTCCAAACCCTTTTTTTTACGATAATTTAAAGTTCAATAAAATCAATACATTAGAAAATAGCTTAAAAAAAGGGTTTTCAAAGTCAAAATTGTTGTTTATCTTTATATAACAAGATTTATCAAATCTTGAGTTCTA # Right flank : AATAAAGTTAATCACATAATTAAAAAGCAATCGGCTATGTTATCTGTTTTATTCCGGCGTCAGAATGTGGCAACAACAGAGCGAGTTTGTGGCGCGCTTGACAAATTTGTCTGGAACAAATTTGAACATCTGAGCATAGCGAAGAAAGCGAATATCAGGATGATACGAGTATTGCCGAAGGCCACATTCTGCAGCCAAAGCGTGGGTTGTCAGGGAATTTGCTTTAATTCCCTGACTCGGACGTGGGCACTGTAGCCATTTTGTTCACCAAAGGTCAAAACGTCAGAAACCACCGTACCAACCCCATTCTATGCACCAACAAAAAAACATCATTTTGATGAAAAAATTGGTCAGGAAAGGTGTTGATTTTATTGATGTTTTTTCTTGTTGTTTTTTAACAAAAAAACAACATTACGCCCCCTGATTTGTCAAAAACAACCCAAGTGATGGATTTTGCGTTTCGTTATGAAAACCATACCCCAAAGCTTTCAAATGCTGAT # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTAACGCCGTATAGGCGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 134521-134848 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTEY01000005.1 Gilliamella sp. Pra-s52 NODE_5_length_147569_cov_194.726086, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 134521 28 100.0 32 ............................ ATTTGTCAGCGATTGTTCTTAGCGACTTAAGC 134581 28 100.0 32 ............................ TTTAAGTGCTCTTAAGAACTCTGACATTTCAG 134641 28 100.0 32 ............................ ATTCGGGTAACTATCCCTATGCCGTCCCCCTC 134701 28 100.0 32 ............................ GATGGTGATAGGGCAACCACTAAAATTACATT 134761 28 100.0 32 ............................ AGCATAAGCCGCGCGAATTTCAGCATCTGTTA 134821 28 92.9 0 ...........C.........G...... | ========== ====== ====== ====== ============================ ================================ ================== 6 28 98.8 32 CTTCAATGCCGTGTAGGCAGTTTAGAAA # Left flank : AAAGCAGATATACAGCAAAAATCATCGATTAGTGATTATGCTTTATTGATGGCTATCACAACAGTACCGACGACGATAAAAGGCCATTTACGTTTTAGTCGTGTTAATCCTAAAGGTCAGAGTGCGTTAAGACGTGCTGAAAAAAGATTAACAGCACAAGGCAAATGGACGCCTGAAGTGAAAAATAAAATGGTTGAAAAGTGGGGAAGTGTTCATTTGCAATACCCACATCTCCATTTGAATAGTAAAAGTACAGGTCAAAGATTCATTTTGTGGTTAAAGCAAGAAAAATGCCCAGAGCCTGTGCAAGGCACATTTAATAGCTATGGACTAAGCCAAAACGCAACAGTTCCTGATTTTTAAATCATTAACCCTTTTTTTGAGGATGATTTTAACATATTGATTATTATTAATATTAAAATAGACTCAAAAAAAGGGTAAAAATTGGGAAAAGTGCAGTATGCTCTTTTACAATAAGGCATTATTGAAATAAAATTCTA # Right flank : AATTATTTGAAAACTTTCGGACTGAATTTTAACCATTATCATAACTATTCTGCCCCAATTTGCGTACTCACTTTTATTTCTCGATTATCAGTAATTTCTAAATTTGACAATACCGCTAATTGAGGAAAATTAGGTCTTAAAAATTGTGAAAGCATTGGTCTTAATGTATGGTTTACTAATAATACTGGTGGTGCACCAATTGCCTCTTGTTGATTAAGCGCTTTTTGCAGTTGCTCAATAATATGTTCAGCAAGCCCTGGTTCAAAATTGCTAGTATTTTGGAGAGCTTGTAATAATAAACGTTCTAAATTAATATTTAACCCTATTACATTGATTGGTGCTGTACCGGGGAACCATTGCTGAGTAATTACCCTACCTAATGCGATTCTTACCATACTAAGTAATTGATAAGTGTCACTTTGGGTTGGTGCATGCTCGCAGATTGTTTCAATGATAGTTCGCATATCTCGAATTGAAACCTTTTCTGCGATCAAGTTTTG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCAATGCCGTGTAGGCAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched CTTCACTGCCGTGTAGGCAGCTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.70,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 53160-52831 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTEY01000009.1 Gilliamella sp. Pra-s52 NODE_9_length_97155_cov_155.986154, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 53159 29 100.0 31 ............................. GCTTTTCATATAAACTCTGTTTTGTTCCGCC 53099 29 100.0 31 ............................. GCTTGGTACATCGATTGACGTTAAGGCTGCT 53039 29 96.6 31 T............................ TACACTCCTGCAACTAAGGCGTGGAGTGACA 52979 29 100.0 31 ............................. TCGGTCAATTTGACCGAGCAGGTTTTTTTTG 52919 29 100.0 31 ............................. TAGGCAAGCTAAGTTTAACCGACAAATAACA 52859 28 86.2 0 C..............-......A..A... | A [52837] ========== ====== ====== ====== ============================= =============================== ================== 6 29 97.1 31 ACTTTAACGCCGTGTAGGTGGTTTAGAAA # Left flank : ATTTCCTTTCTGAACTAAAAACCCAACACGCTAAAGCTATGCTAATACAACCCCAAGTGGCAGGAACCATTAGCGTTACCCCCAAAACTATTGCACAAATCCAAGGCATCCAATTTCAAGCTAAAGCAACTCAATTACAAAATGAACAAGCCAAGCAAGCCTATGGACAATATTATCGAGCGTTTCCTTTTGCAAGGGTTATCAAAGCACCAATTTGGGAATTAGAACTACAAAGCATAAAAATGACCAACAACTTATTAGGATTTGCTAATAAAACGCATTGGGTAAAACAACAAGACATATAAAACAAAAAAACTATTGTCTGCCTTCAAAAGTTTTTTAGGCATTTTTTTGAATACAGAACCCTACAAACCCTTTTTTTTACTTTAATTTAAAATTAAATAAAATCAATCTATTAAAAAATAGTTTAAAAAAAGGGTTTTCAAAGCCAAAATTGTTGTTTATCTTTGTATAGCAAGATTTATCGAATCTTAAGTTCT # Right flank : ATAAAATAAATCAGTTAATTATAAAAAATAATCTCAAAAAATAATTGGCTATTTTGAACCCCCAAAGTCCAAACATCCCAAGCCACCGCACCTAATCCATTCTATTCACTGCCAAAAAAGGTATTATTTTTTACAAAAAAAAGGTCAGGAAAGGTATTGATTTTATTTAAGTTTTTGTTGGTGATTTTTAACACTAAAATCCCCCCAATAATCTGCTCTAAAAACCTCCACTAAGCGGCTATGATTCAAGATAGCATTAGTCACAACCCTAATTCTACGTTAAAATAACTAGCGTTATTACGCTAAATTACCAAGGAAATCGCATGACAACTGAAATGACAACACTCGACAAAATCAAAAAACAAATTGCCGATAACCCAATTATTTTATATATGAAAGGTTCGCCAAAATTGCCAAGTTGTGGCTTTTCGGCTCAGGCAGTGCAGGTTTTGTCGCAATGTGGTGAAGCGTTTGCTTATGTTGATATTTTGCAAAACCCT # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACTTTAACGCCGTGTAGGTGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.40,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //