Array 1 192230-189152 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAGXT010000002.1 Klebsiella pneumoniae strain 5012STDY7312663, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 192229 29 100.0 33 ............................. GCCCGCGCGAACCTGGGGCTGGGAGATTCAGCG 192167 29 100.0 33 ............................. TTGGCGGTCGACGGTGGCGAACTGCCTGATCAG 192105 29 100.0 32 ............................. GGGGGGAAATCAAGGTCAAAGTTGAGCTGGAT 192044 29 100.0 32 ............................. CCTCGATCATTCTTGCCAGTTGGGAGTCGGAC 191983 29 100.0 32 ............................. TCGTAGCTAATAAATTCGTTGCTCATTTGAAA 191922 29 100.0 32 ............................. GCATCGCTCGCCTCGTTCGGTGCTAACGCTGG 191861 29 100.0 32 ............................. CGGCTGCGCTGTTGCACATAGCCGCTCAACCT 191800 29 100.0 32 ............................. CGGCCGCGTTCTCCCCTGTGGGAGGGGTGGGG 191739 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 191678 29 100.0 32 ............................. ATACGCAGTCATTAATCGCGGGTGTTACGCAA 191617 29 100.0 32 ............................. CCTGCTGTCATTTCCTTCGGCACTACCGGCGC 191556 29 100.0 32 ............................. CCTAAATTGCCAATTTTCCTTGAGCGCTGGTA 191495 29 100.0 32 ............................. GTAACAGGTCAACTCTTTATCGCTAACGGCTC 191434 29 100.0 32 ............................. CTTTTCATTTTCTCATGACCGCCACCATTTCG 191373 29 100.0 32 ............................. AATACCGGCGGCAGGGATTTACGCCCGAGCAG 191312 29 100.0 32 ............................. ATTTTGCGTACGCTCTCCCACAGCTGATCGTG 191251 29 100.0 32 ............................. TTTCCGGCAGCGTAGCCAACCCGGCCAACCGT 191190 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 191129 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 191068 29 96.6 32 A............................ GGCGCCGGCCTGATCACTATCGGGTAACGGTG 191007 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTTCACCTGGAA 190946 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 190885 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 190824 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 190763 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 190702 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 190641 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 190580 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 190519 29 100.0 32 ............................. GGCCCAGTAATCCCCGCGAAGTCCTGAAGACG 190458 29 100.0 32 ............................. GTTGCGAAGCCTACGTCCAGATCGTAGAGATA 190397 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 190336 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 190275 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 190214 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 190153 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 190092 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 190031 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 189970 29 100.0 32 ............................. GAATATAAAACCGGATTCCATATAGCCCTGTG 189909 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 189848 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 189787 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 189726 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 189665 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 189604 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 189543 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 189482 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 189421 29 100.0 32 ............................. GAATTTATTGGGAGGTGATAGCTCTGGCAGGT 189360 29 100.0 32 ............................. GGTATGCAGGGCACACGCCAAAATAATTTTGC 189299 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 189238 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 189180 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 51 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGTG # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTCTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCTTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGGAAATCGGGCGCCATCTCATAGCCTGTCAATTCC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //