Array 1 18542-19896 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZQU01000015.1 Helicobacter sp. 'CLO3_human' isolate 106648, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 18542 36 100.0 30 .................................... TGTCTATTTAAATATTTAATCTTCCCTGCT 18608 36 100.0 30 .................................... ATACTATCATTTAAAAATATAGAATACCCA 18674 36 100.0 29 .................................... TCTTCTGCATCTACGGATAAATCATTTGA 18739 36 100.0 30 .................................... GTTCTAGGTCTTAGCAAACTTTGTATGCAA 18805 36 100.0 30 .................................... ATAAATAGTAGATTTGTCTTGTTGTTCATT 18871 36 100.0 30 .................................... CAAATTACTAAACAAGTATTTTAAATCGCA 18937 36 100.0 30 .................................... CCCAGTTGTATTGCTTTTGCAAAACAACAA 19003 36 100.0 30 .................................... CAAATATCCATCTACATCAAAATTTATATT 19069 36 100.0 30 .................................... CCCACTTAAAACTAAAGTCTTTAATCCATA 19135 36 100.0 30 .................................... CTACTTTTTCTAATCCCTCTTTAATCTCTT 19201 36 100.0 30 .................................... TAGGGCATTCTTTATTGTTTGAAGTTCTTT 19267 36 100.0 30 .................................... CTAATTCTTCAACATCAAATAAGTGCCAGT 19333 36 100.0 30 .................................... TCATTGTTCCTCCTTGTATTATAAGCCTAA 19399 36 100.0 30 .................................... AAAAAAGTGATGAACCGAAACCCATACGGG 19465 36 100.0 30 .................................... TTTTGGTGTAGTTGCTTCTATTATGTATGA 19531 36 100.0 30 .................................... AAGTCTAGTAGATACACTCTTAAAGAATTA 19597 36 100.0 30 .................................... ATTTCCTCTTGGCTTGGAGTATTAGATTTT 19663 36 100.0 30 .................................... TTGATGAAGTTAGATTTGTTAGAAGCCCTG 19729 36 100.0 30 .................................... TTGCAATGTTATTAAACACAGATTCTATTG 19795 36 97.2 30 ...................................C ATACTCTCCACAACCATAGTATCGTATAAT 19861 36 97.2 0 ...................................C | ========== ====== ====== ====== ==================================== ============================== ================== 21 36 99.7 30 ATTTTACCATAGAAAGATTTATGAAGTGGCTAAAAT # Left flank : GAAAATTATTTAGAATTGCCTATTTTTAGCAAGGATAGCAATGGAAGAGAAATTTATGAGAGTTTTGGTGATGTTTGATATACCTACAAAAACAAAAGAAGAGAGAAAAGCAGGAACTAAATTTCGTCAAAGACTACTTAAGGAAGGCTTTTTTATGTTGCAATTTTCGGTATATCTGAGGATTTGCAAAGGGATTAAAAGTGCAAATACCTATATGCAAAAACTAGAGAGCTTTGTACCAAAAAAAGGTCATATTAGAGCAATTATTATTACAGAAAAGCAATTTGACAATATGAAGATACTTTTGGGAGAAAGAAGTCTCACAGAAAAGGCTCAAGAGCCAATCCAGCTAACACTTTTTTAGTCTCTAGTTTTTTGGGATGCTAAGCAGTTACCCTGCGGAGAACTAGAAAACTCCTTATTTTAGCCACTTCATAAATCCTATTTTGGTAAATCTCATAGTCCCTAAGAACCTTTACATCTTTGTTTTAGCCAAGGGT # Right flank : CAAGCTGATGCTATCTGATGTCTTTATGTTCTATTATGAAAAGGCTTCTGAAGCCATCGTAAGTAATGGTATAAAAAGTTGGGTAATTTATCTTTAAAAGTAAAATTGAAATTTATTTGATGAGCTAATTTTTTAATCTCGTGTTTTTCTAAAAGTTCTCCATAGATATTGTTTTTATAAAAATAGTTTCTATTCATCATATAGGTATTCCACATTTCAGAATAGAGATGTAAAAAAGGTTGGGATCTATCAAACTTATGAGTTTTTATAAAATCTTTTGCCCTTCCCCAAGAGATTTGGCAAGTTTTTCTATAATCCCAATTGTATCTTTCTAAGTTTGATTGTTTGACTTGTTTGGCTAAAAAAGAAGGACCAATAATAGCCCAGGGAACCCGCTTTCTATGATTGATGATATTTTCAGCTTCTAAAATAAGCTGTTTTCCAAAGCTAGAATTTTTGGGAAATTTTACTAAAGAGTTTGTAACTCTTGGCATGGTCTG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTACCATAGAAAGATTTATGAAGTGGCTAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //