Array 1 2754922-2752477 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP059888.1 Flocculibacter collagenilyticus strain SM1988 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =========================================================================================================== ================== 2754921 28 96.4 32 ........T................... AACTCATAACGTGCACGATTGGCGACTAAAGT 2754861 28 96.4 32 ........T................... AACGCGCAATGGTTGGCGGTGCGGCTGCTGGC 2754801 28 100.0 32 ............................ TTGATGCTCCACCTAACTTCCGAGCTATCCGC 2754741 28 100.0 32 ............................ GCCCAGGATGCTAGAGCGTTACGTCAACAGAA 2754681 28 100.0 32 ............................ GCTAAATTGGGCGATTGGGATTTAGAAGTTGA 2754621 28 100.0 32 ............................ GACTATTTCCAAAACCAACAAATTGATGCTTA 2754561 28 100.0 32 ............................ GCACTCGAAACTGACGACATTTGCATGCTAAT 2754501 28 100.0 32 ............................ ACAAACCATCATTAACAACAACATCGCTTTTA 2754441 28 100.0 32 ............................ GACCCGTTCGGATTAGAACAGGGCACAGACAT 2754381 28 100.0 32 ............................ GCAATAAAAACAGTAAGATTAATTGCAAATTC 2754321 28 100.0 32 ............................ AATTCGTCTTGTTTTCGGCCTTCTTTCTTGGC 2754261 28 100.0 32 ............................ TGCTCCATATCTTCATTATCAATAAGACCAGT 2754201 28 100.0 32 ............................ GCCCAGGATGCTAGAGCGTTACGTCAACAGAA 2754141 28 100.0 32 ............................ GTCTAACGTATAAATGAATTCAAGCATACGCG 2754081 28 100.0 32 ............................ TGTCCAAGAGTCTACTGGTGCCTTTGCTGGCG 2754021 28 100.0 32 ............................ GATAGAAACGTAATTGCTGCACTTGTTATTGC 2753961 28 100.0 32 ............................ ATTATTGAGCCGTGGTATAACCATCTTTCAGC 2753901 28 100.0 32 ............................ GCGCTACCGTCAGAATACGCCCTCAAACAACT 2753841 28 100.0 32 ............................ TGTATTCTCCCATAAGTCCGACTGTTCCATAT 2753781 28 100.0 32 ............................ TTTAAGTGATTCTGATTACTCTGAAGCCGGAA 2753721 28 100.0 32 ............................ ACTAAAATACGTAAGCTTATGCTTGAAAACCC 2753661 28 100.0 32 ............................ AATCGTTACAACACCTTTGCCACTGGTGTGCA 2753601 28 100.0 32 ............................ ATAAAGCACCCTGTAATCAGGAACATTCTTTT 2753541 28 100.0 32 ............................ ATCTTCACATATTATTGAGTCGGTATCACAAT 2753481 28 100.0 32 ............................ AATGGGCAGGTGACATCTTTACGCAACTCCTT 2753421 28 100.0 32 ............................ ATTTTTTCTAAATTGACCTTTTCTTGAGTTAC 2753361 28 100.0 32 ............................ CACCATCACATGTGCTTCCACACACTCAGTAG 2753301 28 100.0 32 ............................ ATATCCCAATCCAGCTGGCTACCTCGTAGGCG 2753241 28 100.0 32 ............................ TAGTGAACAAGTTCAGATTGAAGCTATTAAAG 2753181 28 100.0 32 ............................ AACAACGCTGTTTGTTGCGTGTTATACGCCCT 2753121 28 100.0 32 ............................ ATTCGCATTCTGCATTCATGTTGTCATGCAGT 2753061 28 100.0 32 ............................ ATTCGCATTCTGTATTCATTTTTCCATTGCTT 2753001 28 100.0 32 ............................ GCCAACCCGCCACTGGGTGGCTAAGCGTGAAA 2752941 28 100.0 32 ............................ AAAGTGATGACGGGTGAACAACATGCAGACAA 2752881 28 100.0 32 ............................ ATGCCCAATTTGCCATAGCGCTGGTTTGACAC 2752821 28 100.0 33 ............................ CGCACAAAGAGCTCAAGCTTATTGAAATTACGT 2752760 28 100.0 32 ............................ TTCCCTACCTTTATACTGCGCCTTCATTATTT 2752700 28 100.0 32 ............................ TCTTGAAAGAACATTCCCTTCATCATCCAGAT 2752640 28 89.3 107 .........................GTG ACGAAGAACCGAAACAAAGTTTCGCAGTCTGAGGAAGTGAGGTCATGGATGACCGATGTGAGACGCTCCAAGGATGGATTAACGGCGTGGTTGGTGAATTGAATCAC 2752505 28 89.3 0 ..TC.....................G.. | T [2752479] ========== ====== ====== ====== ============================ =========================================================================================================== ================== 40 28 99.3 34 GTGAACTGCCACACAGGCAGCTTAGAAA # Left flank : AGAAAGCATATAAAAGGTGAAAAGCGCAGGCAAGACACTGTGGTGCAAAAAGCGCATTATCAATCCAAAAAATTTGGAATACCGTTTGATGAAGCGCTTCAATCAATTAAAAATAAGCATACTCTGGCTGACTCAACCCTGCCTTACATAAGAGTGGAAAGCCTATCTAACAATAAAGATAAGCCACCTGCTGAAAAAGCAACCTTTCCGCTTTTTATAGAAATGAAAAAACGAAACGTTGCAAAACAAGGAAGCTACTCATGTTATGGGTTAAGTTTTTCAAGTGAAGAAAAGCATGCAACAGTACCTTGGTTTTAATAACACACTTTATTTTGCAATAAATTACGTTGCAAAATAAAAATCCAAAAAATACCAAAAAAATAGCTCTTTAAAAAATAATAATAAAATCAATAGGCTGCAATAGCCGTTAAATTTTTGGTAAAAAAGCCAAAATAACCCCAAATGACTATTGCAGCTTACTTTTTTGATGATAATCTATT # Right flank : CGAAGAACCGAAATACAGTTTCGCAGTCTGAGGAAATGAGGTCATGGATGGCCGATGTGAGACGTTCCAAGGATGGATTAGCGACGTGGCTGGAGAGTTAAAAGGGCATTGCTATGCTTGAAGAGCTAGCTATTTGGTAAGGAGGTATTTTGGATATTGAAATTATTTGGCGTGGGAAGTGGTTAAATATTGAAGGGTTTAATCACGCTAACAAAGTTACTCATTTTATTTATGGTGCTTTAGTGGGTGGTATAGCTATCTGTCTATTTAGCATATTTAATTTACCTGCACATAGTATTGCGATTGTTGCGTGTAGTTTGGTTGCTGTAGCTAAGGAACATTACGATATAAAGGTGAGGCATTTAACTTGGAGTAAGTGGGATGTGTTAGCGATTTTAGCGTTGCCGTTAGTTGCACTAATAACTAAGTAAATTGTTCATTAGCCTAGAATTTCAGGCACAAAAAAAGGCGTTGCAATGAACGCCTTTTTCTTAATTTGG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.15, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAACTGCCACACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,10] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCACACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //