Array 1 1341736-1339251 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP071099.1 Fusobacterium nucleatum subsp. animalis strain THCT5A4 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================== ================== 1341735 36 100.0 39 .................................... TAATTTCTTTTTTGCTCATTCATTCCAGCCTCCTTCTGC 1341660 36 100.0 38 .................................... TTTACTGCTATAAATTCCAATACTGTATTTTTATTTAT 1341586 36 100.0 37 .................................... CTGAAAGATTTAAACATAGAATACCACCTGTACATCC 1341513 36 100.0 41 .................................... TCATAATTTTACCTACCTTTATTATTTTTTTGTCCTATTTT 1341436 36 100.0 41 .................................... TCATAATTTTACCTACCTTTATTATTTTTTTGTCCTATTTT 1341359 36 100.0 41 .................................... AATATCCACTTTATTTATTGATTAATCTCCATAATATCCAT 1341282 36 100.0 40 .................................... TCAACTTCATCTTTATTTATAATTATTTTAAGACTACTAC 1341206 36 100.0 39 .................................... AATTTTAAATTTTTCATTTTAATACCTCCGTTTTTTAAC 1341131 36 100.0 41 .................................... TCTAAGGAGATTCTTGCTAGTTTAAAATTTTTATAATTGCT 1341054 36 100.0 40 .................................... CAATAGGTGTATTATCCATACGATGTATTTCATAGTTTTC 1340978 36 100.0 41 .................................... TCATATACTTCTTTTTTGAAACATTTATTAATATGTATTTA 1340901 36 100.0 41 .................................... TTTAATACTTGCTTGTTGTCCCCTTCTACCTTATTTATAGC 1340824 36 100.0 38 .................................... TCCTCTTTGGTGCAATTACGCTGCACCTTTTTAATTTT 1340750 36 100.0 40 .................................... TGAAATTAAAGATTGTTTAATATATCCCTTATCCACCAAC 1340674 36 100.0 37 .................................... TTCTCTATTACTTGCTTGAAGCTCCCAGTTCAAGCTA 1340601 36 100.0 39 .................................... TCTTCAATACTTTCAAAGATGTAACCTTGTATATTTTCA 1340526 36 100.0 43 .................................... ATTCTTACTAATTTAAAATTCTTGTAATTGCTATTACTAGCAA 1340447 36 100.0 39 .................................... TTTACGGTGCGTCCTGTTTTCAGTGTATTTTTATAGTCG 1340372 36 100.0 43 .................................... CAACTTTATTTTAAAAATTCTAATAAACATAAATACTCTTTGA 1340293 36 100.0 39 .................................... TTTTTTAAGTAGTATACTTCCATCATCATTTTTTTTATA 1340218 36 100.0 40 .................................... CTTACCTCCTTAAATTTTTTGCATATTTTATCTTTTTATC 1340142 36 100.0 38 .................................... TTAGATAATCAATATAATTATCATCAACTGTAAATAAT 1340068 36 100.0 42 .................................... TTTCACTAATATTAAATTTATATTTACCTGCAACTGCTTTCA 1339990 36 100.0 38 .................................... TGGTAATTATAGAGTAGTAATAAATTATGAATTAAAAA 1339916 36 100.0 43 .................................... AAGAAAAATGTTAAAAAATGCAAGTTTAACACTTGCAAAAAAA 1339837 36 100.0 43 .................................... TGTATGGACATCAAGGACGCTATCAAAACATCCTCTTTGGCTT 1339758 36 100.0 40 .................................... TCCAACCTCCTTCAGCTCCAAAACTAAAAGTGTTATTTTT 1339682 36 100.0 41 .................................... TTAAAGAAACTAACAATACCTACACTTCGTAGGTGGTGGGG 1339605 36 100.0 40 .................................... TCCAACCTCCTTCAGCTCCAAAACTAAAAGTGTTATTTTT 1339529 36 100.0 43 .................................... CCTATATAAATCCCTAAACTGTCCATTTTTAGCCTCCTTTAAG 1339450 36 100.0 42 .................................... ACATTTTCTTTAATTTATGGTATAATACAGCTGATAAGGTTA 1339372 36 94.4 50 ..................................GT AATCTTAAAAATATATTAATAAAAATATTATTGTTATGAATTTTCTAAAA 1339286 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ================================================== ================== 33 36 99.7 41 ATAAGAGAGAATATAACTCCGAGAGGAGACGGAAAC # Left flank : TGCAGATATATATAAGCCAGTTTTAATTAGGTGATATTATGGATAATTGGGATTTTTTAGATGAAGATTTTGAAAAGGAAATTTTTGAAGATAACTTTACTGTTATTATAATTTATGATATTATATCCAATAAAAGAAGAACACAATTATCTAAACTTTTGAGTGCATTTGGATTTAGAATTCAAAAATCAGCATTTGAATGTCTTTTAACAAGAGAAAAATATAAATTACTTATTGAAAAAATTGATAGATATGCAAAGCCTGAAGATTTAATAAGAATTTATAGATTAAATCAAAATGTAATAACTCAAATTTATGGAGAAAAATTAGAAAATGAAAATGAAATGTACTACTTTTTCTAATGAGAGTTAGACGATATATTAAAAATGGGAGGTTTAATATGATTTTTGATAAAATAAAATGTAAATTATTAAAATTTAAAAAATCATACGATAATAGCTCTATAAACTATTACAAACAAAAAGTTTTTTGAGTGTAGG # Right flank : TCATTCTATTGACAAAAAATCAATATCTTTTTATAATATCAGTATGAAGAAATAGAATTCTGAAAAAAGATAAAAAGTATAAAGATGTTATGATATTCCAATATTTAACTAAGAATTTCTTACAATTGAAATTTTTATAGAAAAAATAAAAACTATTTAAGGAGGAATTTTATGAAAAAAACACTATTTTCTATATTGCTTATAGGAATTTGTATGACTGGAGTAGCAAATGCAAAAGAAAAAAATCCAATTCTTTTAAAACAAGTATACAAAAAAGAAGAATTAATAACATTAGACAAACAAAAGGTAGCAGGAGGAAATGGAACTTTACATGGGAAATTTGCCTTTACTAGAGATATGGCTACTGAAGATGAAGCTATTAAAGAAATAGGTTGGATGACATTAAATAAAGGGGAATCTATTGGTGTACACCCTCATAAAAATAATGAAGACACTTACATTATTGTTTCTGGGGAAGGAGTTTTTACAGATGGCTCTGG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAAGAGAGAATATAACTCCGAGAGGAGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.30,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 1985304-1983491 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP071099.1 Fusobacterium nucleatum subsp. animalis strain THCT5A4 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1985303 30 100.0 36 .............................. ATAAAATAAAAAAAAATGATAGTCTTAGACTACCAT 1985237 30 100.0 35 .............................. TTCTTCCCAGCATCCTTCAGCACCAAACTTAAAAG 1985172 30 100.0 36 .............................. TAGTTTAAAATACTGACCCCGTGAGAGCCTTTTAAA 1985106 30 100.0 36 .............................. TACTTTCCTTTGTTATTTTTGTTATCTAAATCTATA 1985040 30 100.0 36 .............................. ATAAAATGTCAATAAAAAATTCATAACATTAATTAT 1984974 30 100.0 36 .............................. GGGAGCTTTAGCTATGAATAAGCTGTTAACTGCTAC 1984908 30 100.0 35 .............................. TATACAATTAATTTTGGAGAAGATGGTACTTATAA 1984843 30 100.0 37 .............................. TTTAGCTTCCTTGTGTAAATTTCATCTATTGTTGGCA 1984776 30 100.0 36 .............................. TTCATATGCTGTCCAGCACCATATAATCTATTCCAA 1984710 30 100.0 36 .............................. GTACAATGTGTTTATTTACGGAGAAGATGGAGTTTA 1984644 30 100.0 36 .............................. TTCCTAGTGCATTAGCTGAGCTATCCAATAACTCTG 1984578 30 100.0 36 .............................. TACAACAGTATTATTGCTATAATTAAAGCTGGAGAA 1984512 30 100.0 36 .............................. ATTGGAGAAAAAGTTAAAAGACTATCTAAATCAGAT 1984446 30 100.0 36 .............................. ATTGGAGAAAAAGTTAAAAGACTATCTAAATCAGAT 1984380 30 100.0 36 .............................. ATGGATGGTTTTGGAAATATTCTGGCCATATGTGAT 1984314 30 100.0 36 .............................. CTCTATCCTATTCCTTAATTTATGTATATCTACTAC 1984248 30 96.7 36 .......G...................... CTCAGATTAATCATCAGATTCAATTCACTCAGATTA 1984182 30 96.7 37 .......G...................... ACGACTTCTAATATATCAAAATCAAAACTATCAACTA 1984115 30 96.7 35 .......G...................... TAGTATCCTGTACTTCCAGGAATAAGGTCATTATC 1984050 30 96.7 36 .......G...................... GTTATCAGAAGTAAGAAAAATGATGCTTTGAGACAA 1983984 30 96.7 36 .......G...................... AAAAATAACTTATTATCAGACATTTTTATCAAAATG 1983918 30 96.7 36 .......G...................... AAAAATAACTTATTATCAGACATTTTTATCAAAATG 1983852 30 96.7 35 .......G...................... AAGAACTTTCTAATTTAACAGATAGAGATATAGAA 1983787 30 96.7 36 .......G...................... ACTCTTGTCTTACCTATGATTAATTCATAGTTTTTA 1983721 30 96.7 39 .......G...................... AACGAACATCTTTATATTATACATTATACTCTTTTTTAA 1983652 30 100.0 36 .............................. AGCATTTGCTCTAAACTTTTTCTATTAAATTCTTTT 1983586 30 96.7 36 ........A..................... CTTATAGCATTATATGAAACCCTATAATTTTCTTTA 1983520 30 80.0 0 ..............AA....A.....TTG. | ========== ====== ====== ====== ============================== ======================================= ================== 28 30 98.1 36 ATGAACTATAAACTTGAAAAGTTTTGAAAT # Left flank : TTTTCTTTAAAAAATTCATATTAGTTTAGGGGATGAGAAAAATTGAAAAATATAAACTATAATTATGCTTGGGTATTTTATGATGTTTCAGAAAAGAGAGTAAATAAAGTTTTTAAAATATGCAAAAAATATTTATCTCATTTTCAAAAATCTGTTTTTCGTGGAGATATAACTCCCTCTAAATTGATTAGTTTAAGAAGTGAATTGAAAAGCATAATAGTTGAAAATGAAGATTTTGTTTGTATTTTAAAATCAATAAGTCCTGATGTTTTTGGAGAAGAAACTTTGGGAAATCCAACTCCAAATGGAGAAAATATATTTCTATAATTTAAAAATTTTCCCAAGCAATATTCTAAAAAACTATTTAAACTTTCCAAAATATGGTTGTTTTAGAAAAATTAAGTAAAAAATAGAATTGCTTGGGAAAAATATATAAAAAATACTTGTAATATTGAAAAAAATAAGGTATTATAAATTTATAAAGCTTGAAAAAATAGCTA # Right flank : TAAAAGGTATTTAGGAAAATATTAGGTAGATACAAAACAAAATTAAGGTAAATAATTTATGAATTGGTAAAAAAATAAAGAAAAAACTAGTAAATTGAATGTATCAATTTTTCCTATGAAGAAGTATTAAAAAGAGAAAAATAACCAAACTCATTTAATTGGAGTCAAATATTATATAACATACTAGTATAGAAGTGAAATATGTTAGAAAGAAAAGAATTATAGATTTGATAAAACAATTAAAAATTGTTGAAACAAGGAGGAAATTATGAAAAAATTTTCTATTCATGGAACAGAAGAGGGAAATACTACCTCAATTAAATTAGATGAAATTGCTATTTTAGCAGATCCAGATACCCTTTTAAAGATAGGGGAATTTATAATAAAAACTGCACATGTGATGAAAGGTTATGAGGTAGATTATAGTCAACTCCAAGATGAAGTTTCAGATTTTGATTATAAAAATAATACAGATATTATTATATATAATCAAGATTATG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGAACTATAAACTTGAAAAGTTTTGAAAT # Alternate repeat : ATGAACTGTAAACTTGAAAAGTTTTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //