Array 1 553557-555804 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIRS01000002.1 Hyunsoonleella pacifica strain SW033 contig2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 553557 45 89.1 30 ......T...-.GG.T.............................. TAATTTTTCATTTAAACCAACAACAACTCA C [553561] 553633 46 100.0 30 .............................................. AAGGCTGGTAAATTGTCTTTGGCTTTGGTA 553709 46 100.0 30 .............................................. CCTATAGGCTGCCATGATGTCCCGTCCCAA 553785 46 100.0 29 .............................................. CCGTATTTTTACCGTTGTATTTTTCAATA 553860 46 100.0 30 .............................................. ACAATCTTAAAAGATAGATTTGACAATGGA 553936 46 100.0 30 .............................................. TAACCTAAATAATGTATTTCATTATGTTGG 554012 46 100.0 30 .............................................. GAATAGTTAGGTTAGAATCTAACGGCTCTA 554088 46 100.0 30 .............................................. TTCGCCTGCAGAAATTGTATTGGTTTCTAA 554164 46 100.0 30 .............................................. TTGCTGATACTGTACCGTGTTGGTCTACTA 554240 46 100.0 30 .............................................. ACCTATTTATTTGTTTTTGCACATATTTTG 554316 46 100.0 30 .............................................. GTTGCGGTGTAATGCACTTGTAAAACGCAG 554392 46 100.0 29 .............................................. TATCATGTTACGCACAGTATGAGCTGTGG 554467 46 100.0 30 .............................................. AGCGATAAAGAGTGCGGTGGCAAATGAACG 554543 46 100.0 30 .............................................. GTGGTTTGATGAGAATAAAACAAAGTTTTG 554619 46 100.0 30 .............................................. AAATCTGTCCAATGGATGATTTGCCCACTA 554695 46 100.0 30 .............................................. GCTAGCTAGTGCAATTAGCCATGGTAGTAC 554771 46 100.0 30 .............................................. TTTGATGTCTTTTACTCCTCTAATGCCTAA 554847 46 100.0 30 .............................................. TCCTCTTCTGGAGGCCCCCCCGCCCCGCAG 554923 46 100.0 30 .............................................. TTTAGCACAAAATTAAGTGATGACCAAATA 554999 46 100.0 30 .............................................. GACAGCCCCTAGAAGCTTAACGGTTTACTG 555075 46 100.0 30 .............................................. TTTGGCATAAATTCATTTTCATCTTCGCCT 555151 46 100.0 30 .............................................. GGATATACAAAAAAAAGCAACAACATCTAG 555227 46 100.0 30 .............................................. ATACCCAACAAAAGAAACTTTATAAGCCTG 555303 46 100.0 30 .............................................. AAGGCGATAGTTTTTGTTATCGCTCTCATG 555379 46 100.0 30 .............................................. TGGGAGGTATAGATTTAAAAAAGAACCGGA 555455 46 100.0 30 .............................................. AACGGAACGCGCTATGGGTATACTGTTGCG 555531 46 100.0 30 .............................................. AACAACCATATTCATGATAAAAGTATTGTG 555607 46 100.0 30 .............................................. ACGACAAAACCATCTATTATCACATCCGTA 555683 46 100.0 30 .............................................. TTATCATTTACTTATACCATTGGCGAACAG 555759 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 30 46 99.6 30 GTTGTGAATTGCTTTCAGTTCTTTAAATTTATGGAGAATTCACAGG # Left flank : TGGAGTACTTTTAGATAATTGGGATTTAAGTGTAAAAAGAGCAACATCTGTAGTTCGTGTATTAGAAGACTTAGGTGTTAAACCTGGTAGGTTAATCGCTGCTGGACGTAGTTCTTATGTGCCATTAGTTGATAATGAAACTGCAGAAAACAGAGCAACTAACAGACGTACAAGAATTGTTGTACTTCCAAAATTAGATCAATTCTATGATTTGATTGAAAAAGAAATGAAAAATTTAGAAGCTGGAGGGAATTAATAAAATCCTTTTAAATAATCATATAAAAGCTCAACCGTAAGGTTGAGCTTTTTTTGTTTTGGTATCATGGCGTTACCCACAAGGGGTCAGGCTTTATTCATTGGTCAATATTTTTTATTATTGTATTCATGAATGTTAACATTTCAGCAGTCGCTCCCTCCTACGTCGGGGAGTTTCAATCACGCCATAGCGTGACTTCAATCCTTAACGCAAAGCACTATTATTTTTTTAGAGGATTTCATCG # Right flank : GATACTTACTGTAACAGGCTGGTATCCTGTTTTTTATGTTATGGGTTTGGATTTTAATAATTTGGCTTTCAAATGGACTTCGACTGCGCTCAGTCTGACATTTTAAGTTCTATTTGTATAGTATTTGAGATGCTGAATCGAGTTCAGCATGACAGGGCGTGTTTAAATGGATTCCTGCCTTCGCAGGAATGACAATCCTAAAAAAGTTCCAATTGTTGTGACGGTGGCTCCAAATCGGCTTCTTTTTGACCATGGAACAGTTCCATCATCCCAAATTGCTTATCGGTAATTTGCATGATACATACCTTTCCTTTTTTTGGCAGTGCCTTTTTTGTACGTTTTATGTGTACGGTAGCATTTTCTCTGCTTGGGCAAAATCTGGTATAAATGCTAAACTGAAACATGCCAAAACCATCATCTAACAAATTCTTTCTAAAACGTGTCGCTGCTTTACGCTCGGTAAGCGTCTCCGTTGGTAAATCAAAAAACACCAATACCCA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAGTTCTTTAAATTTATGGAGAATTCACAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.39%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAGTTCTTTAAATTTATGGATGATTCACAGG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.40,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //