Array 1 143038-141569 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQXI01000004.1 Haladaptatus paucihalophilus DX253 B208DRAFT_contig4.4_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 143037 30 100.0 37 .............................. TCCCAGACTCAAGGCGAGTTTTATCTTCTCTCTAATC 142970 30 100.0 36 .............................. CACGAATACGAGGACCCGATCAATGACTGACGAATA 142904 30 100.0 35 .............................. CTCTTTTTCCAGTTGTTTCCGTAGCCTCGCGATGG 142839 30 100.0 35 .............................. CTCGGGCGTCCACTCGGGGAACGTGGACGCGTCCT 142774 30 100.0 38 .............................. TTGTTGACGATGGACAAACGGCGGTTGTTGAAGTTGGT 142706 30 100.0 36 .............................. ACCCGGAGATGCTCAAAGACCTCGGTGAACACGATG 142640 30 100.0 35 .............................. GAACCCGCGCGTGCACACCAGCATTTATCGCACAG 142575 30 100.0 34 .............................. AACTCAAATGCCGCATCCCATGCATCCGTCGCAT 142511 30 100.0 35 .............................. AGCGAATTCGCCGCGTCATCGCAGCGGGGATGCGG 142446 30 100.0 35 .............................. CGCTCATAGGAACCGATCCTCTACGCTCGCATCCG 142381 30 100.0 35 .............................. CTCGTCGAGGACGTCCATACCGCGTGGACGAGTGC 142316 30 100.0 33 .............................. AGGATGAGTAACATTGTCGCTGAGAATACGATA 142253 30 100.0 34 .............................. TCGGAGTCCACTTGATTCCCCGTGTGTCTCTCCA 142189 30 100.0 38 .............................. AATTTCGTCGGTGACGAGATTCTTCTTGATTGCCGATT 142121 30 100.0 37 .............................. TGGATTCGTAGCACGCCGTCGTCTAACAGATACTCCG 142054 30 100.0 33 .............................. TGGTCTGAATCGCCTGTATCGTGGCTTGATCGC 141991 30 100.0 36 .............................. GTCTACGACGAGGAGACCGCCGAGGAAATCAACGTC 141925 30 100.0 36 .............................. CTTCGATGACATGGCCGACGTTTTCGAGATGCTGTT 141859 30 100.0 33 .............................. TCTTCCCGAGAAGGCTGTTTTCGCGGCATCATG 141796 30 100.0 36 .............................. GACTTGTGGAGTGGCCTAAGGATCTCGAACAGGAAA 141730 30 100.0 36 .............................. CTCGTGTATCGCGTCGACGCTATCGGCGTACTCTCC 141664 30 100.0 36 .............................. CGCCTCGTAGGGGTTGAGTCGGTCGAAGGCAGAAAT 141598 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 23 30 100.0 35 GTTACAGACGAACCGTAGTAGGGTTGAAGC # Left flank : GAGGAAACGGTCGAACATCCACGATTGGATCGAAACGTGAGCTACCAGTACTTGCTTCGCATAGAAGCGTACAAACTCAAGAAACACTTGCTCACTGGCGAAGCCTACATCTCGTTCAAACGGTGGTGGTGAGATGGTTTACATCGTTGTTGTCTACGATATGCAGGCAGATCGGACACGTCTCATGCTAAACTTCCTCCGGAAGTACCTCACGCACGTCCAAAACTCCGTTTTCGAGGGAGAAGTAACAGAAGGCGACCTCGAGACGATTCAGAACAAGACACGTGAAACACTCAAGTCCGACGAGTCAGCGATCATCTACCGAATGAGCTCGGAGAAGTACGTTGATCGAATGGTTGTCGGTGAGGACCCCACCGACGACGCACGGTTTCTTTAAGTCGCCCGTCGACCCCCCGGGGGTTCATGGGGTATTGGCGGTCGACGGAAACGACCAAGTGTGAACAGTGAGAAGAGCCGGTGAGTGTCCGAAATTGGGCATG # Right flank : GACGTCTCCCAGGTCGAACAGCTTCTCGCGGCGACGTTACAGACGAACAGAAATAGGTCACTTACTATGATTTAGTTATCGAGATATCGACATCAAGTAGAAACTGAATATGAACTATTCCCGAGGGTCTTCTACAAATTCGTAAAGACCTCGATTCACACGTCGAATCCAGCCTGCATCGACCAGACTTCCAAGTGCATCGTTAACGCGCTGTTTTTCTAGACCTGTAACATCTCTTATTCGAAGTGGGTTAACCCGCTGTTCGTCTTTGAAGACTTGCAGAACAACCTCCTGATTCTCGGAGGGGCTAAACTCTTCATTAACCACAGTTACTATAGTACTCATTCCGTCACCTCATTAGTCCTTTCGTGCAGAATTACTTAGTAATTTCCAACGTATTTCTGTAGTCCGTTACTAAGTAACGCTTATTAAGATGGCGCTACAAACAGAGTATAGAAGCGTGGATGGTCAGAAACTCTGGCCGGGTGGTGGCACACCCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACAGACGAACCGTAGTAGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.50,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 2 152762-153384 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQXI01000004.1 Haladaptatus paucihalophilus DX253 B208DRAFT_contig4.4_C, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 152762 30 100.0 37 .............................. TTCGCCCGGTTCGTTCTCGCACCCCGGCAGTCGGCAG 152829 30 100.0 36 .............................. TGGAACCGCCCTTGTGGCACAGCAGCAAGCCGATGA 152895 30 100.0 35 .............................. GATGGGTATCTTCACATCGACTACAACGCAACCGA 152960 30 100.0 35 .............................. CTGTTTTTCGAGGCGGACAGAGGTTATCTCTGCCA 153025 30 100.0 36 .............................. TGTCATTATTCGGTCCTCCATGTGCTCGTGAATCGC 153091 30 100.0 36 .............................. CTATTTGGTAATGAGTTAGGGACGAATAGAGGACTT 153157 30 100.0 34 .............................. CTGCCGTGTGTCGGCCACTGCCTGCAAAACGCCC 153221 30 100.0 37 .............................. ACCGACCACTCGTTACGTCCCTCCCATCTCGCCCAGC 153288 30 100.0 37 .............................. GAATTCATCGCACTGGTGGCGTTTGGAATTTACGCCA 153355 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 10 30 100.0 36 GTTACAGACGAACCGTCCTAGGGTTGAAGC # Left flank : AAGTGACGTGCCATTCCCGTGTTCGTCATCGAATTTGGTTCCTTGGAGCGCACGCCATATCCGACCACGAACTTTATGATGGAAGTTTGTATCTGGTGCAGCGTCGGCTTGTGCGACCAAGTCAACTAACAAACGCATCCTCACACATCACCTCCTGTAAAATCAATACAGTTTTCATCTCTACAGATTACTCTTGTTATTGTATGTATATATGTTTTTATCATGGTCTGACATAGAATCTGATCAAAAGATGGGCCAGTCGCAACAGCTCCTACCGTTGGCTTCCTACCAGGGGCTTCAACCCGTGTGATTCTACTGGATGATCTGAAATCTTGATAAGGTGATTCCTACTAATTCGGCATTCTACAAGGTACCAAATAAGAATATATTTCTTTAAGACAACCATCGACCTCCTAGGGGAAGAGGGGTTATTGGGGGTCGACGGAAACAACCAAGTGTGAACAGTGAGAAGAGCCGGTGAGTGTCCAGAATTGGGCATG # Right flank : CATCGCGTGATGGAACGCTCGGCCATCTCTTCCATCACTCGATAGCCATCGTTCTTGTACGCACAACCGTAGTGGGTCGCGAGCTCTCGATATCCGAGTCGTGCAACCATCACGTCATTCGTCTTGGCGACGTTCTTCGCGTGTTTGAGCACATCGAGGTACTTGTTCTCGACTTGCTGACTCTCAGCGCGCTTCTCGCGGAAGTTGACGAGCTCAGTGTTCTGTTCCGAGCGCTGGACTGTCTCAAAGAGCTGACGGCCTGCATTCGAGCTACACAAATCGAGAAGTCACTGGCTATTCAAGACGGCTCTCGCACGTTGGACATAGGTGTTCTTCGACCAACTTCGTGCCGTACTCATCTCATCGAGTAATGACTCCGCGTCAGCTGGTGATACAATCTCGTTTCGCACAAGCGCAACGAGCAGCATCGGCGTGGTCACAAGCCGAGTATCAACGAGTGACGCATGGATGAGGGCAAGCCGATTGAACTCGTCACACAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACAGACGAACCGTCCTAGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.00,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //