Array 1 561565-560626 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ235735.1 Fusobacterium nucleatum subsp. vincentii 4_1_13 supercont2.4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 561564 36 100.0 37 .................................... CTAGTGAAAAATATATTGACATTTTTAAAAATTTATA 561491 36 100.0 36 .................................... TAAAAGCTGATGTTGTAGCATTATAAAAATGGGGGA 561419 36 100.0 38 .................................... TTTATAACATCTTTTTTATCCATACCTGCAGCAGTACC 561345 36 100.0 36 .................................... TATCAGCATTGAATACTATTGACATATAATCATTTT 561273 36 100.0 40 .................................... TTAGATGCCACAGTTAAGTCTAATATCTTTTTATCATTTA 561197 36 100.0 44 .................................... TCATATTCCCAGTCATTGACGTTTAACTTATCTATTTCTATCTC 561117 36 100.0 40 .................................... TTAGATGCCACAGTTAAGTCTAATATCTTTTTATCATTTA 561041 36 100.0 38 .................................... TGGAGCTGGAGGAACAGTAACAAACAATGCAGCTAATG 560967 36 100.0 44 .................................... TCATATTCCCAGTCATTGACGTTTAACTTATCTATTTCTATCTC 560887 36 100.0 40 .................................... TTAGATGCCACAGTTAAGTCTAATATCTTTTTATCATTTA 560811 36 100.0 39 .................................... CCACTTTTCTAGCCAATTCATTGTAACTTCTAATCATTT 560736 36 100.0 39 .................................... CCAACTACCTGTTATATAATAAAAATAATGTTCTTTATC 560661 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================ ================== 13 36 100.0 39 ATACGAGAAAAGATAACTCCGAGAGGAGACGGAAAC # Left flank : TGCAGATATATATAAGCCAGTTTTAATTAGGTGATATTATGGATAATTGGGATTTTTTAGATGAAGATTTTGAAAAGGAAATTTTTGAAGACAACTTTACTGTTATTATAATTTATGATATTATATCCAATAAAAGAAGAACACAATTATCTAAACTTTTGAGTGCATTTGGATTTAGAATTCAGAAATCAGCATTTGAGTGTCTTTTAACAAGAGAAAAATATAAATTACTTATTGAAGAAATTGATAGATATGCAAAACCTGAAGATTTAATAAGAATTTATAGATTGAATCAAAATGTAGTAACTCAAATTTATGGAGAAAAATTAGAAAATGAAAATGAAATGTACTACTTCTTTTAAAGAGAGCTAGACGATATATTAGAAATGGGAGGTTTAATATGATTTTTGATAAAATAAAATGTAATTTTTTAAAACTTAAAAAGTCATACGATAATAGCTTTATAAACTATTATAAACAAAAGATTTTTTGAGTGTAGG # Right flank : TTTTAATTAAAATTTGATTGTAAGACATTTTATTATTTAATAGGGGGAGAATACTTTGAGAGAAGCCAAAAACACATTCTATTGACAAAAAATTAATATATTTTTATAATACTAATATAAGAAAATAGGATTCTGAAGAAAGATAGAAAATGCTAAAAATATAATAATATTCCAATATTTAATTAAGAATTTCTCACAATTGAAATTTTTATAGAAAAAAATAAAAACTATTTAAGGAGGAATTTTATGAAAAAAACACTATTTTCTATATTACTTATAGGAATTTGTATGACTGGAATAGCAAATGCAAAAGAAAAAAATCCAATTCTTTTAAAACAAGTATATAAAAAGGAAGAATTGATAACATTGGACAAACAAAATGTAGCAGGAGGAAATGGAACTTTACATGGAAAATTTGCCTTTACAAGAGATATGGCTACTGAAGACGAAGCTATCAAAGAAATAGGTTGGATGACACTAAATAAAGGGGAATCTGTTGG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATACGAGAAAAGATAACTCCGAGAGGAGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.30,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [78.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //